data_3JZC # _model_server_result.job_id 90D7YPBzfYIAA25GxExUkA _model_server_result.datetime_utc '2024-11-24 19:29:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3jzc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3JZC # _exptl.entry_id 3JZC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 621.932 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3JZC _cell.length_a 68.781 _cell.length_b 68.781 _cell.length_c 131.013 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3JZC _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C PHE 95 A PHE 293 1_555 A N CAS 96 A CAS 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C CAS 96 A CAS 294 1_555 A N GLU 97 A GLU 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C PRO 99 A PRO 297 1_555 A N CAS 100 A CAS 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C CAS 100 A CAS 298 1_555 A N GLU 101 A GLU 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C ALA 189 A ALA 387 1_555 A N CAS 190 A CAS 388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C CAS 190 A CAS 388 1_555 A N VAL 191 A VAL 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 A C ALA 235 A ALA 433 1_555 A N CAS 236 A CAS 434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale8 A C CAS 236 A CAS 434 1_555 A N HIS 237 A HIS 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? # _chem_comp.formula 'C14 H9 I3 O4' _chem_comp.formula_weight 621.932 _chem_comp.id 4HY _chem_comp.mon_nstd_flag . _chem_comp.name '[4-(4-HYDROXY-3-IODO-PHENOXY)-3,5-DIIODO-PHENYL]-ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C3 4HY doub 1 n y C1 C11 4HY sing 2 n y C1 C13 4HY sing 3 n n C2 C4 4HY doub 4 n y C2 C12 4HY sing 5 n y C2 O2 4HY sing 6 n n C3 C5 4HY sing 7 n y C3 HC31 4HY sing 8 n n C4 C6 4HY sing 9 n y C4 HC41 4HY sing 10 n n C5 C7 4HY doub 11 n y C5 I1 4HY sing 12 n n C6 C8 4HY doub 13 n y C6 I2 4HY sing 14 n n C7 C9 4HY sing 15 n y C7 O2 4HY sing 16 n n C8 C10 4HY sing 17 n y C8 O1 4HY sing 18 n n C9 C11 4HY doub 19 n y C9 I3 4HY sing 20 n n C10 C12 4HY doub 21 n y C10 H101 4HY sing 22 n n C11 H111 4HY sing 23 n n C12 H121 4HY sing 24 n n C13 C14 4HY sing 25 n n C13 H131 4HY sing 26 n n C13 H132 4HY sing 27 n n C14 O3 4HY doub 28 n n C14 O4 4HY sing 29 n n O1 HO11 4HY sing 30 n n O4 HO41 4HY sing 31 n n # _atom_sites.entry_id 3JZC _atom_sites.fract_transf_matrix[1][1] 0.014539 _atom_sites.fract_transf_matrix[1][2] 0.008394 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007633 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 4HY A 1 1 1 4HY 4HY . C 3 HOH A 1 462 462 HOH HOH . C 3 HOH A 2 463 463 HOH HOH . C 3 HOH A 3 464 464 HOH HOH . C 3 HOH A 4 465 465 HOH HOH . C 3 HOH A 5 466 466 HOH HOH . C 3 HOH A 6 467 467 HOH HOH . C 3 HOH A 7 468 468 HOH HOH . C 3 HOH A 8 469 469 HOH HOH . C 3 HOH A 9 470 470 HOH HOH . C 3 HOH A 10 471 471 HOH HOH . C 3 HOH A 11 472 472 HOH HOH . C 3 HOH A 12 473 473 HOH HOH . C 3 HOH A 13 474 474 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4HY . . . B 2 -15.178 -16.166 -27.122 1 51.89 ? C1 4HY 1 A 1 HETATM 2 C C2 4HY . . . B 2 -14.182 -12.138 -29.798 1 50.16 ? C2 4HY 1 A 1 HETATM 3 C C3 4HY . . . B 2 -14.78 -16.292 -28.446 1 54.28 ? C3 4HY 1 A 1 HETATM 4 C C4 4HY . . . B 2 -13.661 -11.427 -30.867 1 50.5 ? C4 4HY 1 A 1 HETATM 5 C C5 4HY . . . B 2 -14.164 -15.225 -29.102 1 57.96 ? C5 4HY 1 A 1 HETATM 6 C C6 4HY . . . B 2 -14.482 -10.61 -31.633 1 54.21 ? C6 4HY 1 A 1 HETATM 7 C C7 4HY . . . B 2 -13.963 -14.011 -28.44 1 53.42 ? C7 4HY 1 A 1 HETATM 8 C C8 4HY . . . B 2 -15.834 -10.503 -31.336 1 53.21 ? C8 4HY 1 A 1 HETATM 9 C C9 4HY . . . B 2 -14.388 -13.885 -27.12 1 55.5 ? C9 4HY 1 A 1 HETATM 10 C C10 4HY . . . B 2 -16.361 -11.214 -30.272 1 52.85 ? C10 4HY 1 A 1 HETATM 11 C C11 4HY . . . B 2 -14.987 -14.957 -26.469 1 53.89 ? C11 4HY 1 A 1 HETATM 12 C C12 4HY . . . B 2 -15.539 -12.033 -29.508 1 53.35 ? C12 4HY 1 A 1 HETATM 13 C C13 4HY . . . B 2 -15.887 -17.308 -26.371 1 47.67 ? C13 4HY 1 A 1 HETATM 14 C C14 4HY . . . B 2 -15.061 -18.554 -26.024 1 47.47 ? C14 4HY 1 A 1 HETATM 15 I I1 4HY . . . B 2 -13.555 -15.475 -31.112 1 51.93 ? I1 4HY 1 A 1 HETATM 16 I I2 4HY . . . B 2 -13.64 -9.534 -33.232 1 58.03 ? I2 4HY 1 A 1 HETATM 17 I I3 4HY . . . B 2 -14.074 -12.076 -26.093 1 48.34 ? I3 4HY 1 A 1 HETATM 18 O O3 4HY . . . B 2 -13.887 -18.388 -25.623 1 45.98 ? O3 4HY 1 A 1 HETATM 19 O O2 4HY . . . B 2 -13.36 -12.945 -29.062 1 50.22 ? O2 4HY 1 A 1 HETATM 20 O O1 4HY . . . B 2 -16.635 -9.706 -32.082 1 55.25 ? O1 4HY 1 A 1 HETATM 21 O O4 4HY . . . B 2 -15.683 -19.647 -26.088 1 49.25 ? O4 4HY 1 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #