data_3K2P # _model_server_result.job_id yEr3FqPFxYk6zyMY56CaGA _model_server_result.datetime_utc '2025-02-26 08:54:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k2p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1001}' # _entry.id 3K2P # _exptl.entry_id 3K2P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.2 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3K2P _cell.length_a 51.143 _cell.length_b 51.143 _cell.length_c 112.435 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K2P _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 A,B,C,D,E,F,G,H,I,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 19 A ASP 443 1_555 C MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc2 A OD2 ASP 19 A ASP 443 1_555 D MN MN . A MN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc3 A OE2 GLU 54 A GLU 478 1_555 C MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? metalc ? metalc4 A OD1 ASP 74 A ASP 498 1_555 C MN MN . A MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc5 A OD2 ASP 125 A ASP 549 1_555 D MN MN . A MN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc6 C MN MN . A MN 901 1_555 E O1 JTH . A JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc7 C MN MN . A MN 901 1_555 E O7 JTH . A JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc8 D MN MN . A MN 902 1_555 E O2 JTH . A JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc9 D MN MN . A MN 902 1_555 E O1 JTH . A JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc10 B OD1 ASP 19 B ASP 443 1_555 F MN MN . B MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc11 B OD2 ASP 19 B ASP 443 1_555 G MN MN . B MN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc12 B OE2 GLU 54 B GLU 478 1_555 F MN MN . B MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.907 ? metalc ? metalc13 B OD1 ASP 74 B ASP 498 1_555 F MN MN . B MN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc14 B OD2 ASP 125 B ASP 549 1_555 G MN MN . B MN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc15 F MN MN . B MN 901 1_555 H O7 JTH . B JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc16 F MN MN . B MN 901 1_555 H O1 JTH . B JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc17 G MN MN . B MN 902 1_555 H O1 JTH . B JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc18 G MN MN . B MN 902 1_555 H O2 JTH . B JTH 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.537 ? # _chem_comp.formula 'C10 H12 O3' _chem_comp.formula_weight 180.2 _chem_comp.id JTH _chem_comp.mon_nstd_flag . _chem_comp.name 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms beta-thujaplicinol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 JTH sing 160 n n C1 C7 JTH sing 161 n n O1 C1 JTH doub 162 n n C2 C3 JTH doub 163 n n O2 C2 JTH sing 164 n n C3 C4 JTH sing 165 n n C3 H3 JTH sing 166 n n C4 C5 JTH doub 167 n n C4 C42 JTH sing 168 n n C5 H5 JTH sing 169 n n C6 C5 JTH sing 170 n n C6 H6 JTH sing 171 n n C7 C6 JTH doub 172 n n O7 C7 JTH sing 173 n n C41 C42 JTH sing 174 n n C41 H41 JTH sing 175 n n C41 H41A JTH sing 176 n n C41 H41B JTH sing 177 n n C42 C43 JTH sing 178 n n C42 H42 JTH sing 179 n n C43 H43 JTH sing 180 n n C43 H43A JTH sing 181 n n C43 H43B JTH sing 182 n n O2 H11 JTH sing 183 n n O7 H12 JTH sing 184 n n # _atom_sites.entry_id 3K2P _atom_sites.fract_transf_matrix[1][1] 0.019553 _atom_sites.fract_transf_matrix[1][2] 0.011289 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022578 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008894 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MN A 1 901 901 MN MN . D 2 MN A 1 902 902 MN MN . E 3 JTH A 1 1001 1001 JTH JTH . F 2 MN B 1 901 901 MN MN . G 2 MN B 1 902 902 MN MN . H 3 JTH B 1 1001 1001 JTH JTH . I 4 HOH A 1 1 1 HOH HOH . I 4 HOH A 2 4 4 HOH HOH . I 4 HOH A 3 5 5 HOH HOH . I 4 HOH A 4 6 6 HOH HOH . I 4 HOH A 5 8 8 HOH HOH . I 4 HOH A 6 9 9 HOH HOH . I 4 HOH A 7 10 10 HOH HOH . I 4 HOH A 8 12 12 HOH HOH . I 4 HOH A 9 15 15 HOH HOH . I 4 HOH A 10 18 18 HOH HOH . I 4 HOH A 11 19 19 HOH HOH . I 4 HOH A 12 22 22 HOH HOH . I 4 HOH A 13 24 24 HOH HOH . I 4 HOH A 14 25 25 HOH HOH . I 4 HOH A 15 29 29 HOH HOH . I 4 HOH A 16 31 31 HOH HOH . I 4 HOH A 17 32 32 HOH HOH . I 4 HOH A 18 33 33 HOH HOH . I 4 HOH A 19 34 34 HOH HOH . I 4 HOH A 20 37 37 HOH HOH . I 4 HOH A 21 39 39 HOH HOH . I 4 HOH A 22 42 42 HOH HOH . I 4 HOH A 23 47 47 HOH HOH . I 4 HOH A 24 49 49 HOH HOH . I 4 HOH A 25 53 53 HOH HOH . I 4 HOH A 26 56 56 HOH HOH . I 4 HOH A 27 60 60 HOH HOH . I 4 HOH A 28 63 63 HOH HOH . I 4 HOH A 29 67 67 HOH HOH . I 4 HOH A 30 68 68 HOH HOH . I 4 HOH A 31 78 78 HOH HOH . I 4 HOH A 32 79 79 HOH HOH . I 4 HOH A 33 82 82 HOH HOH . I 4 HOH A 34 84 84 HOH HOH . I 4 HOH A 35 86 86 HOH HOH . I 4 HOH A 36 88 88 HOH HOH . I 4 HOH A 37 89 89 HOH HOH . I 4 HOH A 38 90 90 HOH HOH . I 4 HOH A 39 91 91 HOH HOH . I 4 HOH A 40 94 94 HOH HOH . I 4 HOH A 41 100 100 HOH HOH . I 4 HOH A 42 103 103 HOH HOH . I 4 HOH A 43 107 107 HOH HOH . I 4 HOH A 44 108 108 HOH HOH . I 4 HOH A 45 109 109 HOH HOH . I 4 HOH A 46 113 113 HOH HOH . I 4 HOH A 47 126 126 HOH HOH . I 4 HOH A 48 128 128 HOH HOH . I 4 HOH A 49 131 131 HOH HOH . I 4 HOH A 50 133 133 HOH HOH . I 4 HOH A 51 136 136 HOH HOH . I 4 HOH A 52 138 138 HOH HOH . I 4 HOH A 53 144 144 HOH HOH . I 4 HOH A 54 146 146 HOH HOH . I 4 HOH A 55 153 153 HOH HOH . I 4 HOH A 56 156 156 HOH HOH . I 4 HOH A 57 157 157 HOH HOH . I 4 HOH A 58 159 159 HOH HOH . I 4 HOH A 59 163 163 HOH HOH . I 4 HOH A 60 171 171 HOH HOH . I 4 HOH A 61 179 179 HOH HOH . I 4 HOH A 62 184 184 HOH HOH . I 4 HOH A 63 187 187 HOH HOH . I 4 HOH A 64 190 190 HOH HOH . I 4 HOH A 65 192 192 HOH HOH . I 4 HOH A 66 193 193 HOH HOH . I 4 HOH A 67 194 194 HOH HOH . I 4 HOH A 68 196 196 HOH HOH . I 4 HOH A 69 197 197 HOH HOH . I 4 HOH A 70 206 206 HOH HOH . I 4 HOH A 71 207 207 HOH HOH . I 4 HOH A 72 208 208 HOH HOH . I 4 HOH A 73 212 212 HOH HOH . I 4 HOH A 74 213 213 HOH HOH . I 4 HOH A 75 214 214 HOH HOH . I 4 HOH A 76 215 215 HOH HOH . I 4 HOH A 77 216 216 HOH HOH . I 4 HOH A 78 217 217 HOH HOH . J 4 HOH B 1 2 2 HOH HOH . J 4 HOH B 2 3 3 HOH HOH . J 4 HOH B 3 7 7 HOH HOH . J 4 HOH B 4 11 11 HOH HOH . J 4 HOH B 5 13 13 HOH HOH . J 4 HOH B 6 14 14 HOH HOH . J 4 HOH B 7 16 16 HOH HOH . J 4 HOH B 8 17 17 HOH HOH . J 4 HOH B 9 20 20 HOH HOH . J 4 HOH B 10 21 21 HOH HOH . J 4 HOH B 11 23 23 HOH HOH . J 4 HOH B 12 26 26 HOH HOH . J 4 HOH B 13 28 28 HOH HOH . J 4 HOH B 14 30 30 HOH HOH . J 4 HOH B 15 36 36 HOH HOH . J 4 HOH B 16 38 38 HOH HOH . J 4 HOH B 17 40 40 HOH HOH . J 4 HOH B 18 41 41 HOH HOH . J 4 HOH B 19 43 43 HOH HOH . J 4 HOH B 20 44 44 HOH HOH . J 4 HOH B 21 45 45 HOH HOH . J 4 HOH B 22 48 48 HOH HOH . J 4 HOH B 23 50 50 HOH HOH . J 4 HOH B 24 51 51 HOH HOH . J 4 HOH B 25 52 52 HOH HOH . J 4 HOH B 26 54 54 HOH HOH . J 4 HOH B 27 55 55 HOH HOH . J 4 HOH B 28 57 57 HOH HOH . J 4 HOH B 29 58 58 HOH HOH . J 4 HOH B 30 59 59 HOH HOH . J 4 HOH B 31 61 61 HOH HOH . J 4 HOH B 32 62 62 HOH HOH . J 4 HOH B 33 64 64 HOH HOH . J 4 HOH B 34 65 65 HOH HOH . J 4 HOH B 35 66 66 HOH HOH . J 4 HOH B 36 69 69 HOH HOH . J 4 HOH B 37 70 70 HOH HOH . J 4 HOH B 38 71 71 HOH HOH . J 4 HOH B 39 72 72 HOH HOH . J 4 HOH B 40 73 73 HOH HOH . J 4 HOH B 41 74 74 HOH HOH . J 4 HOH B 42 75 75 HOH HOH . J 4 HOH B 43 77 77 HOH HOH . J 4 HOH B 44 83 83 HOH HOH . J 4 HOH B 45 85 85 HOH HOH . J 4 HOH B 46 92 92 HOH HOH . J 4 HOH B 47 93 93 HOH HOH . J 4 HOH B 48 95 95 HOH HOH . J 4 HOH B 49 96 96 HOH HOH . J 4 HOH B 50 97 97 HOH HOH . J 4 HOH B 51 99 99 HOH HOH . J 4 HOH B 52 102 102 HOH HOH . J 4 HOH B 53 105 105 HOH HOH . J 4 HOH B 54 111 111 HOH HOH . J 4 HOH B 55 112 112 HOH HOH . J 4 HOH B 56 114 114 HOH HOH . J 4 HOH B 57 116 116 HOH HOH . J 4 HOH B 58 117 117 HOH HOH . J 4 HOH B 59 122 122 HOH HOH . J 4 HOH B 60 123 123 HOH HOH . J 4 HOH B 61 124 124 HOH HOH . J 4 HOH B 62 125 125 HOH HOH . J 4 HOH B 63 127 127 HOH HOH . J 4 HOH B 64 129 129 HOH HOH . J 4 HOH B 65 130 130 HOH HOH . J 4 HOH B 66 132 132 HOH HOH . J 4 HOH B 67 134 134 HOH HOH . J 4 HOH B 68 137 137 HOH HOH . J 4 HOH B 69 140 140 HOH HOH . J 4 HOH B 70 147 147 HOH HOH . J 4 HOH B 71 148 148 HOH HOH . J 4 HOH B 72 152 152 HOH HOH . J 4 HOH B 73 155 155 HOH HOH . J 4 HOH B 74 158 158 HOH HOH . J 4 HOH B 75 161 161 HOH HOH . J 4 HOH B 76 164 164 HOH HOH . J 4 HOH B 77 165 165 HOH HOH . J 4 HOH B 78 166 166 HOH HOH . J 4 HOH B 79 169 169 HOH HOH . J 4 HOH B 80 174 174 HOH HOH . J 4 HOH B 81 180 180 HOH HOH . J 4 HOH B 82 181 181 HOH HOH . J 4 HOH B 83 189 189 HOH HOH . J 4 HOH B 84 198 198 HOH HOH . J 4 HOH B 85 199 199 HOH HOH . J 4 HOH B 86 203 203 HOH HOH . J 4 HOH B 87 204 204 HOH HOH . J 4 HOH B 88 209 209 HOH HOH . J 4 HOH B 89 210 210 HOH HOH . J 4 HOH B 90 218 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 JTH . . . H 3 5.854 35.876 -5.816 1 36.48 ? C1 JTH 1001 B 1 HETATM 2 O O1 JTH . . . H 3 6.704 36.496 -5.177 1 40.05 ? O1 JTH 1001 B 1 HETATM 3 C C2 JTH . . . H 3 5.023 36.582 -6.635 1 39.37 ? C2 JTH 1001 B 1 HETATM 4 O O2 JTH . . . H 3 5.05 37.933 -6.718 1 31.02 ? O2 JTH 1001 B 1 HETATM 5 C C3 JTH . . . H 3 4.032 36.065 -7.434 1 42.41 ? C3 JTH 1001 B 1 HETATM 6 C C4 JTH . . . H 3 3.57 34.817 -7.652 1 45.66 ? C4 JTH 1001 B 1 HETATM 7 C C5 JTH . . . H 3 4.084 33.698 -7.079 1 44.76 ? C5 JTH 1001 B 1 HETATM 8 C C6 JTH . . . H 3 5.051 33.568 -6.186 1 39.72 ? C6 JTH 1001 B 1 HETATM 9 C C7 JTH . . . H 3 5.849 34.502 -5.602 1 38.27 ? C7 JTH 1001 B 1 HETATM 10 O O7 JTH . . . H 3 6.77 33.937 -4.812 1 34.43 ? O7 JTH 1001 B 1 HETATM 11 C C41 JTH . . . H 3 3.119 34.488 -10.041 1 50.63 ? C41 JTH 1001 B 1 HETATM 12 C C42 JTH . . . H 3 2.425 34.575 -8.663 1 45.23 ? C42 JTH 1001 B 1 HETATM 13 C C43 JTH . . . H 3 1.354 35.664 -8.681 1 48.02 ? C43 JTH 1001 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #