data_3K2R # _model_server_result.job_id ADY3S0DQZHI-2e8vgMSjDQ _model_server_result.datetime_utc '2024-11-08 14:53:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k2r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":166}' # _entry.id 3K2R # _exptl.entry_id 3K2R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEXANE-1,6-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3K2R _cell.length_a 59.547 _cell.length_b 59.547 _cell.length_c 95.28 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K2R _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 65 A CYS 65 1_555 B S3 V1A . A V1A 1065 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? covale ? covale2 A SG CYS 76 A CYS 76 1_555 D S3 V1A . A V1A 1076 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id HEZ _chem_comp.mon_nstd_flag . _chem_comp.name HEXANE-1,6-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 HEZ sing 129 n n O1 HO1 HEZ sing 130 n n C1 C2 HEZ sing 131 n n C1 H11 HEZ sing 132 n n C1 H12 HEZ sing 133 n n C2 C3 HEZ sing 134 n n C2 H21 HEZ sing 135 n n C2 H22 HEZ sing 136 n n C3 C4 HEZ sing 137 n n C3 H31 HEZ sing 138 n n C3 H32 HEZ sing 139 n n C4 C5 HEZ sing 140 n n C4 H41 HEZ sing 141 n n C4 H42 HEZ sing 142 n n C5 C6 HEZ sing 143 n n C5 H51 HEZ sing 144 n n C5 H52 HEZ sing 145 n n C6 O6 HEZ sing 146 n n C6 H61 HEZ sing 147 n n C6 H62 HEZ sing 148 n n O6 HO6 HEZ sing 149 n n # _atom_sites.entry_id 3K2R _atom_sites.fract_transf_matrix[1][1] 0.016793 _atom_sites.fract_transf_matrix[1][2] 0.009696 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019391 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010495 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 V1A A 1 1065 65 V1A V1A . C 3 HEZ A 1 165 165 HEZ HEZ . D 2 V1A A 1 1076 76 V1A V1A . E 3 HEZ A 1 166 166 HEZ HEZ . F 4 CL A 1 167 167 CL CL . G 4 CL A 1 168 168 CL CL . H 5 K A 1 169 169 K K . I 6 HOH A 1 172 172 HOH HOH . I 6 HOH A 2 173 173 HOH HOH . I 6 HOH A 3 174 174 HOH HOH . I 6 HOH A 4 175 175 HOH HOH . I 6 HOH A 5 176 176 HOH HOH . I 6 HOH A 6 177 177 HOH HOH . I 6 HOH A 7 178 178 HOH HOH . I 6 HOH A 8 179 179 HOH HOH . I 6 HOH A 9 180 180 HOH HOH . I 6 HOH A 10 181 181 HOH HOH . I 6 HOH A 11 182 182 HOH HOH . I 6 HOH A 12 183 183 HOH HOH . I 6 HOH A 13 184 184 HOH HOH . I 6 HOH A 14 185 185 HOH HOH . I 6 HOH A 15 186 186 HOH HOH . I 6 HOH A 16 187 187 HOH HOH . I 6 HOH A 17 188 188 HOH HOH . I 6 HOH A 18 189 189 HOH HOH . I 6 HOH A 19 190 190 HOH HOH . I 6 HOH A 20 191 191 HOH HOH . I 6 HOH A 21 192 192 HOH HOH . I 6 HOH A 22 193 193 HOH HOH . I 6 HOH A 23 194 194 HOH HOH . I 6 HOH A 24 195 195 HOH HOH . I 6 HOH A 25 196 196 HOH HOH . I 6 HOH A 26 197 197 HOH HOH . I 6 HOH A 27 198 198 HOH HOH . I 6 HOH A 28 199 199 HOH HOH . I 6 HOH A 29 200 200 HOH HOH . I 6 HOH A 30 201 201 HOH HOH . I 6 HOH A 31 202 202 HOH HOH . I 6 HOH A 32 203 203 HOH HOH . I 6 HOH A 33 204 204 HOH HOH . I 6 HOH A 34 205 205 HOH HOH . I 6 HOH A 35 206 206 HOH HOH . I 6 HOH A 36 207 207 HOH HOH . I 6 HOH A 37 208 208 HOH HOH . I 6 HOH A 38 209 209 HOH HOH . I 6 HOH A 39 210 210 HOH HOH . I 6 HOH A 40 211 211 HOH HOH . I 6 HOH A 41 212 212 HOH HOH . I 6 HOH A 42 213 213 HOH HOH . I 6 HOH A 43 214 214 HOH HOH . I 6 HOH A 44 215 215 HOH HOH . I 6 HOH A 45 216 216 HOH HOH . I 6 HOH A 46 217 217 HOH HOH . I 6 HOH A 47 218 218 HOH HOH . I 6 HOH A 48 219 219 HOH HOH . I 6 HOH A 49 220 220 HOH HOH . I 6 HOH A 50 221 221 HOH HOH . I 6 HOH A 51 222 222 HOH HOH . I 6 HOH A 52 223 223 HOH HOH . I 6 HOH A 53 224 224 HOH HOH . I 6 HOH A 54 225 225 HOH HOH . I 6 HOH A 55 226 226 HOH HOH . I 6 HOH A 56 227 227 HOH HOH . I 6 HOH A 57 228 228 HOH HOH . I 6 HOH A 58 229 229 HOH HOH . I 6 HOH A 59 230 230 HOH HOH . I 6 HOH A 60 231 231 HOH HOH . I 6 HOH A 61 232 232 HOH HOH . I 6 HOH A 62 233 233 HOH HOH . I 6 HOH A 63 234 234 HOH HOH . I 6 HOH A 64 235 235 HOH HOH . I 6 HOH A 65 236 236 HOH HOH . I 6 HOH A 66 237 237 HOH HOH . I 6 HOH A 67 238 238 HOH HOH . I 6 HOH A 68 239 239 HOH HOH . I 6 HOH A 69 240 240 HOH HOH . I 6 HOH A 70 241 241 HOH HOH . I 6 HOH A 71 242 242 HOH HOH . I 6 HOH A 72 243 243 HOH HOH . I 6 HOH A 73 244 244 HOH HOH . I 6 HOH A 74 245 245 HOH HOH . I 6 HOH A 75 246 246 HOH HOH . I 6 HOH A 76 247 247 HOH HOH . I 6 HOH A 77 248 248 HOH HOH . I 6 HOH A 78 249 249 HOH HOH . I 6 HOH A 79 250 250 HOH HOH . I 6 HOH A 80 251 251 HOH HOH . I 6 HOH A 81 252 252 HOH HOH . I 6 HOH A 82 253 253 HOH HOH . I 6 HOH A 83 254 254 HOH HOH . I 6 HOH A 84 255 255 HOH HOH . I 6 HOH A 85 256 256 HOH HOH . I 6 HOH A 86 257 257 HOH HOH . I 6 HOH A 87 258 258 HOH HOH . I 6 HOH A 88 259 259 HOH HOH . I 6 HOH A 89 260 260 HOH HOH . I 6 HOH A 90 261 261 HOH HOH . I 6 HOH A 91 262 262 HOH HOH . I 6 HOH A 92 263 263 HOH HOH . I 6 HOH A 93 264 264 HOH HOH . I 6 HOH A 94 265 265 HOH HOH . I 6 HOH A 95 266 266 HOH HOH . I 6 HOH A 96 267 267 HOH HOH . I 6 HOH A 97 268 268 HOH HOH . I 6 HOH A 98 269 269 HOH HOH . I 6 HOH A 99 270 270 HOH HOH . I 6 HOH A 100 271 271 HOH HOH . I 6 HOH A 101 272 272 HOH HOH . I 6 HOH A 102 273 273 HOH HOH . I 6 HOH A 103 274 274 HOH HOH . I 6 HOH A 104 275 275 HOH HOH . I 6 HOH A 105 276 276 HOH HOH . I 6 HOH A 106 277 277 HOH HOH . I 6 HOH A 107 278 278 HOH HOH . I 6 HOH A 108 279 279 HOH HOH . I 6 HOH A 109 280 280 HOH HOH . I 6 HOH A 110 281 281 HOH HOH . I 6 HOH A 111 282 282 HOH HOH . I 6 HOH A 112 283 283 HOH HOH . I 6 HOH A 113 284 284 HOH HOH . I 6 HOH A 114 285 285 HOH HOH . I 6 HOH A 115 286 286 HOH HOH . I 6 HOH A 116 287 287 HOH HOH . I 6 HOH A 117 288 288 HOH HOH . I 6 HOH A 118 289 289 HOH HOH . I 6 HOH A 119 290 290 HOH HOH . I 6 HOH A 120 291 291 HOH HOH . I 6 HOH A 121 292 292 HOH HOH . I 6 HOH A 122 293 293 HOH HOH . I 6 HOH A 123 294 294 HOH HOH . I 6 HOH A 124 295 295 HOH HOH . I 6 HOH A 125 296 296 HOH HOH . I 6 HOH A 126 297 297 HOH HOH . I 6 HOH A 127 298 298 HOH HOH . I 6 HOH A 128 299 299 HOH HOH . I 6 HOH A 129 300 300 HOH HOH . I 6 HOH A 130 301 301 HOH HOH . I 6 HOH A 131 302 302 HOH HOH . I 6 HOH A 132 303 303 HOH HOH . I 6 HOH A 133 304 304 HOH HOH . I 6 HOH A 134 305 305 HOH HOH . I 6 HOH A 135 306 306 HOH HOH . I 6 HOH A 136 307 307 HOH HOH . I 6 HOH A 137 308 308 HOH HOH . I 6 HOH A 138 309 309 HOH HOH . I 6 HOH A 139 310 310 HOH HOH . I 6 HOH A 140 311 311 HOH HOH . I 6 HOH A 141 312 312 HOH HOH . I 6 HOH A 142 313 313 HOH HOH . I 6 HOH A 143 314 314 HOH HOH . I 6 HOH A 144 315 315 HOH HOH . I 6 HOH A 145 316 316 HOH HOH . I 6 HOH A 146 317 317 HOH HOH . I 6 HOH A 147 318 318 HOH HOH . I 6 HOH A 148 319 319 HOH HOH . I 6 HOH A 149 320 320 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 HEZ . . . E 3 -25.659 15.973 15.59 1 20.85 ? O1 HEZ 166 A 1 HETATM 2 C C1 HEZ . . . E 3 -25.403 14.566 15.723 1 24.43 ? C1 HEZ 166 A 1 HETATM 3 C C2 HEZ . . . E 3 -26.566 13.779 15.114 1 20.63 ? C2 HEZ 166 A 1 HETATM 4 C C3 HEZ . . . E 3 -27.783 13.846 16.031 1 24.14 ? C3 HEZ 166 A 1 HETATM 5 C C4 HEZ . . . E 3 -28.809 12.75 15.742 1 27.91 ? C4 HEZ 166 A 1 HETATM 6 C C5 HEZ . . . E 3 -29.883 13.25 14.789 1 29.56 ? C5 HEZ 166 A 1 HETATM 7 C C6 HEZ . . . E 3 -31.109 12.344 14.773 1 31.41 ? C6 HEZ 166 A 1 HETATM 8 O O6 HEZ . . . E 3 -32.228 13.079 14.264 1 44.04 ? O6 HEZ 166 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 8 #