data_3K2X # _model_server_result.job_id BOE9ALeShQ3KZHgl2-ZTSg _model_server_result.datetime_utc '2024-11-05 08:23:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k2x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":163}' # _entry.id 3K2X # _exptl.entry_id 3K2X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.13 _cell.angle_gamma 90 _cell.entry_id 3K2X _cell.length_a 117.475 _cell.length_b 67.673 _cell.length_c 60.025 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K2X _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 H N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 31 A ASP 10 1_555 D ZN ZN . A ZN 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc2 A NE2 HIS 33 A HIS 12 1_555 D ZN ZN . A ZN 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc3 A ND1 HIS 65 A HIS 44 1_555 D ZN ZN . A ZN 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc4 D ZN ZN . A ZN 163 1_555 L O HOH . A HOH 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc5 G K K . A K 166 1_555 L O HOH . A HOH 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc6 G K K . A K 166 1_555 L O HOH . A HOH 279 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc7 G K K . A K 166 1_555 M O HOH . B HOH 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc8 G K K . A K 166 1_555 M O HOH . B HOH 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? metalc ? metalc9 G K K . A K 166 1_555 N O HOH . C HOH 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.186 ? metalc ? metalc10 L O HOH . A HOH 230 1_555 J ZN ZN . C ZN 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc11 B OD2 ASP 31 B ASP 10 1_555 H ZN ZN . B ZN 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc12 B NE2 HIS 33 B HIS 12 1_555 H ZN ZN . B ZN 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc13 B ND1 HIS 65 B HIS 44 1_555 H ZN ZN . B ZN 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc14 H ZN ZN . B ZN 163 1_555 N O HOH . C HOH 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc15 C OD2 ASP 31 C ASP 10 1_555 J ZN ZN . C ZN 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc16 C NE2 HIS 33 C HIS 12 1_555 J ZN ZN . C ZN 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? metalc ? metalc17 C ND1 HIS 65 C HIS 44 1_555 J ZN ZN . C ZN 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3K2X _atom_sites.fract_transf_matrix[1][1] 0.008512 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000914 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014777 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016756 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN A 1 163 163 ZN ZN . E 3 I5A A 1 164 164 I5A I5A . F 4 CL A 1 165 165 CL CL . G 5 K A 1 166 166 K K . H 2 ZN B 1 163 163 ZN ZN . I 3 I5A B 1 164 164 I5A I5A . J 2 ZN C 1 163 163 ZN ZN . K 3 I5A C 1 164 164 I5A I5A . L 6 HOH A 1 167 167 HOH HOH . L 6 HOH A 2 168 168 HOH HOH . L 6 HOH A 3 169 169 HOH HOH . L 6 HOH A 4 170 170 HOH HOH . L 6 HOH A 5 171 171 HOH HOH . L 6 HOH A 6 172 172 HOH HOH . L 6 HOH A 7 173 173 HOH HOH . L 6 HOH A 8 174 174 HOH HOH . L 6 HOH A 9 175 175 HOH HOH . L 6 HOH A 10 176 176 HOH HOH . L 6 HOH A 11 177 177 HOH HOH . L 6 HOH A 12 178 178 HOH HOH . L 6 HOH A 13 179 179 HOH HOH . L 6 HOH A 14 180 180 HOH HOH . L 6 HOH A 15 181 181 HOH HOH . L 6 HOH A 16 182 182 HOH HOH . L 6 HOH A 17 183 183 HOH HOH . L 6 HOH A 18 184 184 HOH HOH . L 6 HOH A 19 185 185 HOH HOH . L 6 HOH A 20 186 186 HOH HOH . L 6 HOH A 21 187 187 HOH HOH . L 6 HOH A 22 188 188 HOH HOH . L 6 HOH A 23 189 189 HOH HOH . L 6 HOH A 24 190 190 HOH HOH . L 6 HOH A 25 191 191 HOH HOH . L 6 HOH A 26 192 192 HOH HOH . L 6 HOH A 27 193 193 HOH HOH . L 6 HOH A 28 194 194 HOH HOH . L 6 HOH A 29 195 195 HOH HOH . L 6 HOH A 30 196 196 HOH HOH . L 6 HOH A 31 197 197 HOH HOH . L 6 HOH A 32 198 198 HOH HOH . L 6 HOH A 33 199 199 HOH HOH . L 6 HOH A 34 200 200 HOH HOH . L 6 HOH A 35 201 201 HOH HOH . L 6 HOH A 36 202 202 HOH HOH . L 6 HOH A 37 203 203 HOH HOH . L 6 HOH A 38 204 204 HOH HOH . L 6 HOH A 39 205 205 HOH HOH . L 6 HOH A 40 206 206 HOH HOH . L 6 HOH A 41 207 207 HOH HOH . L 6 HOH A 42 208 208 HOH HOH . L 6 HOH A 43 209 209 HOH HOH . L 6 HOH A 44 210 210 HOH HOH . L 6 HOH A 45 211 211 HOH HOH . L 6 HOH A 46 212 212 HOH HOH . L 6 HOH A 47 213 213 HOH HOH . L 6 HOH A 48 214 214 HOH HOH . L 6 HOH A 49 215 215 HOH HOH . L 6 HOH A 50 216 216 HOH HOH . L 6 HOH A 51 217 217 HOH HOH . L 6 HOH A 52 218 218 HOH HOH . L 6 HOH A 53 219 219 HOH HOH . L 6 HOH A 54 220 220 HOH HOH . L 6 HOH A 55 221 221 HOH HOH . L 6 HOH A 56 222 222 HOH HOH . L 6 HOH A 57 223 223 HOH HOH . L 6 HOH A 58 224 224 HOH HOH . L 6 HOH A 59 225 225 HOH HOH . L 6 HOH A 60 226 226 HOH HOH . L 6 HOH A 61 227 227 HOH HOH . L 6 HOH A 62 228 228 HOH HOH . L 6 HOH A 63 229 229 HOH HOH . L 6 HOH A 64 230 230 HOH HOH . L 6 HOH A 65 231 231 HOH HOH . L 6 HOH A 66 232 232 HOH HOH . L 6 HOH A 67 233 233 HOH HOH . L 6 HOH A 68 234 234 HOH HOH . L 6 HOH A 69 235 235 HOH HOH . L 6 HOH A 70 236 236 HOH HOH . L 6 HOH A 71 237 237 HOH HOH . L 6 HOH A 72 238 238 HOH HOH . L 6 HOH A 73 239 239 HOH HOH . L 6 HOH A 74 240 240 HOH HOH . L 6 HOH A 75 241 241 HOH HOH . L 6 HOH A 76 242 242 HOH HOH . L 6 HOH A 77 243 243 HOH HOH . L 6 HOH A 78 244 244 HOH HOH . L 6 HOH A 79 245 245 HOH HOH . L 6 HOH A 80 246 246 HOH HOH . L 6 HOH A 81 247 247 HOH HOH . L 6 HOH A 82 248 248 HOH HOH . L 6 HOH A 83 249 249 HOH HOH . L 6 HOH A 84 250 250 HOH HOH . L 6 HOH A 85 251 251 HOH HOH . L 6 HOH A 86 252 252 HOH HOH . L 6 HOH A 87 253 253 HOH HOH . L 6 HOH A 88 254 254 HOH HOH . L 6 HOH A 89 255 255 HOH HOH . L 6 HOH A 90 256 256 HOH HOH . L 6 HOH A 91 257 257 HOH HOH . L 6 HOH A 92 258 258 HOH HOH . L 6 HOH A 93 259 259 HOH HOH . L 6 HOH A 94 260 260 HOH HOH . L 6 HOH A 95 261 261 HOH HOH . L 6 HOH A 96 262 262 HOH HOH . L 6 HOH A 97 263 263 HOH HOH . L 6 HOH A 98 264 264 HOH HOH . L 6 HOH A 99 265 265 HOH HOH . L 6 HOH A 100 266 266 HOH HOH . L 6 HOH A 101 267 267 HOH HOH . L 6 HOH A 102 268 268 HOH HOH . L 6 HOH A 103 269 269 HOH HOH . L 6 HOH A 104 270 270 HOH HOH . L 6 HOH A 105 271 271 HOH HOH . L 6 HOH A 106 272 272 HOH HOH . L 6 HOH A 107 273 273 HOH HOH . L 6 HOH A 108 274 274 HOH HOH . L 6 HOH A 109 275 275 HOH HOH . L 6 HOH A 110 276 276 HOH HOH . L 6 HOH A 111 277 277 HOH HOH . L 6 HOH A 112 278 278 HOH HOH . L 6 HOH A 113 279 279 HOH HOH . L 6 HOH A 114 280 280 HOH HOH . L 6 HOH A 115 281 281 HOH HOH . L 6 HOH A 116 282 282 HOH HOH . L 6 HOH A 117 283 283 HOH HOH . L 6 HOH A 118 284 284 HOH HOH . M 6 HOH B 1 165 165 HOH HOH . M 6 HOH B 2 166 166 HOH HOH . M 6 HOH B 3 167 167 HOH HOH . M 6 HOH B 4 168 168 HOH HOH . M 6 HOH B 5 169 169 HOH HOH . M 6 HOH B 6 170 170 HOH HOH . M 6 HOH B 7 171 171 HOH HOH . M 6 HOH B 8 172 172 HOH HOH . M 6 HOH B 9 173 173 HOH HOH . M 6 HOH B 10 174 174 HOH HOH . M 6 HOH B 11 175 175 HOH HOH . M 6 HOH B 12 176 176 HOH HOH . M 6 HOH B 13 177 177 HOH HOH . M 6 HOH B 14 178 178 HOH HOH . M 6 HOH B 15 179 179 HOH HOH . M 6 HOH B 16 180 180 HOH HOH . M 6 HOH B 17 181 181 HOH HOH . M 6 HOH B 18 182 182 HOH HOH . M 6 HOH B 19 183 183 HOH HOH . M 6 HOH B 20 184 184 HOH HOH . M 6 HOH B 21 185 185 HOH HOH . M 6 HOH B 22 186 186 HOH HOH . M 6 HOH B 23 187 187 HOH HOH . M 6 HOH B 24 188 188 HOH HOH . M 6 HOH B 25 189 189 HOH HOH . M 6 HOH B 26 190 190 HOH HOH . M 6 HOH B 27 191 191 HOH HOH . M 6 HOH B 28 192 192 HOH HOH . M 6 HOH B 29 193 193 HOH HOH . M 6 HOH B 30 194 194 HOH HOH . M 6 HOH B 31 195 195 HOH HOH . M 6 HOH B 32 196 196 HOH HOH . M 6 HOH B 33 197 197 HOH HOH . M 6 HOH B 34 198 198 HOH HOH . M 6 HOH B 35 199 199 HOH HOH . M 6 HOH B 36 200 200 HOH HOH . M 6 HOH B 37 201 201 HOH HOH . M 6 HOH B 38 202 202 HOH HOH . M 6 HOH B 39 203 203 HOH HOH . M 6 HOH B 40 204 204 HOH HOH . M 6 HOH B 41 205 205 HOH HOH . M 6 HOH B 42 206 206 HOH HOH . M 6 HOH B 43 207 207 HOH HOH . M 6 HOH B 44 208 208 HOH HOH . M 6 HOH B 45 209 209 HOH HOH . M 6 HOH B 46 210 210 HOH HOH . M 6 HOH B 47 212 212 HOH HOH . M 6 HOH B 48 213 213 HOH HOH . M 6 HOH B 49 214 214 HOH HOH . M 6 HOH B 50 225 225 HOH HOH . M 6 HOH B 51 226 226 HOH HOH . M 6 HOH B 52 227 227 HOH HOH . M 6 HOH B 53 228 228 HOH HOH . M 6 HOH B 54 229 229 HOH HOH . M 6 HOH B 55 236 236 HOH HOH . M 6 HOH B 56 239 239 HOH HOH . M 6 HOH B 57 244 244 HOH HOH . M 6 HOH B 58 245 245 HOH HOH . M 6 HOH B 59 246 246 HOH HOH . M 6 HOH B 60 247 247 HOH HOH . M 6 HOH B 61 248 248 HOH HOH . M 6 HOH B 62 249 249 HOH HOH . N 6 HOH C 1 165 165 HOH HOH . N 6 HOH C 2 166 166 HOH HOH . N 6 HOH C 3 167 167 HOH HOH . N 6 HOH C 4 168 168 HOH HOH . N 6 HOH C 5 169 169 HOH HOH . N 6 HOH C 6 170 170 HOH HOH . N 6 HOH C 7 171 171 HOH HOH . N 6 HOH C 8 172 172 HOH HOH . N 6 HOH C 9 173 173 HOH HOH . N 6 HOH C 10 174 174 HOH HOH . N 6 HOH C 11 175 175 HOH HOH . N 6 HOH C 12 176 176 HOH HOH . N 6 HOH C 13 177 177 HOH HOH . N 6 HOH C 14 178 178 HOH HOH . N 6 HOH C 15 179 179 HOH HOH . N 6 HOH C 16 180 180 HOH HOH . N 6 HOH C 17 181 181 HOH HOH . N 6 HOH C 18 182 182 HOH HOH . N 6 HOH C 19 183 183 HOH HOH . N 6 HOH C 20 184 184 HOH HOH . N 6 HOH C 21 185 185 HOH HOH . N 6 HOH C 22 186 186 HOH HOH . N 6 HOH C 23 187 187 HOH HOH . N 6 HOH C 24 188 188 HOH HOH . N 6 HOH C 25 189 189 HOH HOH . N 6 HOH C 26 190 190 HOH HOH . N 6 HOH C 27 191 191 HOH HOH . N 6 HOH C 28 192 192 HOH HOH . N 6 HOH C 29 193 193 HOH HOH . N 6 HOH C 30 194 194 HOH HOH . N 6 HOH C 31 195 195 HOH HOH . N 6 HOH C 32 196 196 HOH HOH . N 6 HOH C 33 197 197 HOH HOH . N 6 HOH C 34 198 198 HOH HOH . N 6 HOH C 35 199 199 HOH HOH . N 6 HOH C 36 200 200 HOH HOH . N 6 HOH C 37 201 201 HOH HOH . N 6 HOH C 38 202 202 HOH HOH . N 6 HOH C 39 203 203 HOH HOH . N 6 HOH C 40 204 204 HOH HOH . N 6 HOH C 41 205 205 HOH HOH . N 6 HOH C 42 206 206 HOH HOH . N 6 HOH C 43 207 207 HOH HOH . N 6 HOH C 44 208 208 HOH HOH . N 6 HOH C 45 209 209 HOH HOH . N 6 HOH C 46 210 210 HOH HOH . N 6 HOH C 47 211 211 HOH HOH . N 6 HOH C 48 212 212 HOH HOH . N 6 HOH C 49 213 213 HOH HOH . N 6 HOH C 50 214 214 HOH HOH . N 6 HOH C 51 215 215 HOH HOH . N 6 HOH C 52 216 216 HOH HOH . N 6 HOH C 53 217 217 HOH HOH . N 6 HOH C 54 218 218 HOH HOH . N 6 HOH C 55 219 219 HOH HOH . N 6 HOH C 56 220 220 HOH HOH . N 6 HOH C 57 221 221 HOH HOH . N 6 HOH C 58 222 222 HOH HOH . N 6 HOH C 59 223 223 HOH HOH . N 6 HOH C 60 224 224 HOH HOH . N 6 HOH C 61 225 225 HOH HOH . N 6 HOH C 62 226 226 HOH HOH . N 6 HOH C 63 227 227 HOH HOH . N 6 HOH C 64 228 228 HOH HOH . N 6 HOH C 65 229 229 HOH HOH . N 6 HOH C 66 230 230 HOH HOH . N 6 HOH C 67 231 231 HOH HOH . N 6 HOH C 68 232 232 HOH HOH . N 6 HOH C 69 233 233 HOH HOH . N 6 HOH C 70 234 234 HOH HOH . N 6 HOH C 71 235 235 HOH HOH . N 6 HOH C 72 250 250 HOH HOH . N 6 HOH C 73 251 251 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 9.183 _atom_site.Cartn_y -28.515 _atom_site.Cartn_z -13.124 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 163 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #