data_3K3J # _model_server_result.job_id 9sr7NQH8_e65OcZhv389OQ _model_server_result.datetime_utc '2024-12-04 06:45:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k3j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":361}' # _entry.id 3K3J # _exptl.entry_id 3K3J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 468.403 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(4-fluorophenyl)-3-oxo-6-pyridin-4-yl-N-[2-(trifluoromethyl)benzyl]-2,3-dihydropyridazine-4-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3K3J _cell.length_a 66.179 _cell.length_b 74.722 _cell.length_c 77.733 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K3J _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H16 F4 N4 O2' _chem_comp.formula_weight 468.403 _chem_comp.id F4C _chem_comp.mon_nstd_flag . _chem_comp.name 2-(4-fluorophenyl)-3-oxo-6-pyridin-4-yl-N-[2-(trifluoromethyl)benzyl]-2,3-dihydropyridazine-4-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C8 F4C sing 83 n n N1 C2 F4C sing 84 n n N1 N2 F4C sing 85 n n N3 C6 F4C sing 86 n n N3 C11 F4C sing 87 n n C4 C10 F4C sing 88 n n C4 N2 F4C doub 89 n n C4 C3 F4C sing 90 n n C5 C7 F4C sing 91 n n C5 F1 F4C sing 92 n n C5 F2 F4C sing 93 n n C5 F3 F4C sing 94 n n C6 C1 F4C sing 95 n n C6 O2 F4C doub 96 n n C7 C17 F4C doub 97 n y C7 C9 F4C sing 98 n y C8 C13 F4C doub 99 n y C8 C12 F4C sing 100 n y C10 C20 F4C doub 101 n y C10 C21 F4C sing 102 n y C13 C15 F4C sing 103 n y C15 C14 F4C doub 104 n y C17 C23 F4C sing 105 n y C20 C18 F4C sing 106 n y C21 C19 F4C doub 107 n y C22 C24 F4C sing 108 n y C22 C9 F4C doub 109 n y C24 C23 F4C doub 110 n y F4 C14 F4C sing 111 n n C14 C16 F4C sing 112 n y C16 C12 F4C doub 113 n y C2 O1 F4C doub 114 n n C2 C1 F4C sing 115 n n C18 N4 F4C doub 116 n y C19 N4 F4C sing 117 n y C3 C1 F4C doub 118 n n C11 C9 F4C sing 119 n n N3 HN3 F4C sing 120 n n C13 H13 F4C sing 121 n n C15 H15 F4C sing 122 n n C17 H17 F4C sing 123 n n C20 H20 F4C sing 124 n n C21 H21 F4C sing 125 n n C22 H22 F4C sing 126 n n C24 H24 F4C sing 127 n n C16 H16 F4C sing 128 n n C12 H12 F4C sing 129 n n C18 H18 F4C sing 130 n n C19 H19 F4C sing 131 n n C3 H3 F4C sing 132 n n C11 H11 F4C sing 133 n n C11 H11A F4C sing 134 n n C23 H23 F4C sing 135 n n # _atom_sites.entry_id 3K3J _atom_sites.fract_transf_matrix[1][1] 0.015111 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013383 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012865 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 F4C A 1 361 361 F4C F4C . C 3 I46 A 1 362 362 I46 I46 . D 4 HOH A 1 363 363 HOH HOH . D 4 HOH A 2 364 364 HOH HOH . D 4 HOH A 3 365 365 HOH HOH . D 4 HOH A 4 366 366 HOH HOH . D 4 HOH A 5 367 367 HOH HOH . D 4 HOH A 6 368 368 HOH HOH . D 4 HOH A 7 369 369 HOH HOH . D 4 HOH A 8 370 370 HOH HOH . D 4 HOH A 9 371 371 HOH HOH . D 4 HOH A 10 372 372 HOH HOH . D 4 HOH A 11 373 373 HOH HOH . D 4 HOH A 12 374 374 HOH HOH . D 4 HOH A 13 375 375 HOH HOH . D 4 HOH A 14 376 376 HOH HOH . D 4 HOH A 15 377 377 HOH HOH . D 4 HOH A 16 378 378 HOH HOH . D 4 HOH A 17 379 379 HOH HOH . D 4 HOH A 18 380 380 HOH HOH . D 4 HOH A 19 381 381 HOH HOH . D 4 HOH A 20 382 382 HOH HOH . D 4 HOH A 21 383 383 HOH HOH . D 4 HOH A 22 384 384 HOH HOH . D 4 HOH A 23 385 385 HOH HOH . D 4 HOH A 24 386 386 HOH HOH . D 4 HOH A 25 387 387 HOH HOH . D 4 HOH A 26 388 388 HOH HOH . D 4 HOH A 27 389 389 HOH HOH . D 4 HOH A 28 390 390 HOH HOH . D 4 HOH A 29 391 391 HOH HOH . D 4 HOH A 30 392 392 HOH HOH . D 4 HOH A 31 393 393 HOH HOH . D 4 HOH A 32 394 394 HOH HOH . D 4 HOH A 33 395 395 HOH HOH . D 4 HOH A 34 396 396 HOH HOH . D 4 HOH A 35 397 397 HOH HOH . D 4 HOH A 36 398 398 HOH HOH . D 4 HOH A 37 399 399 HOH HOH . D 4 HOH A 38 400 400 HOH HOH . D 4 HOH A 39 401 401 HOH HOH . D 4 HOH A 40 402 402 HOH HOH . D 4 HOH A 41 403 403 HOH HOH . D 4 HOH A 42 404 404 HOH HOH . D 4 HOH A 43 405 405 HOH HOH . D 4 HOH A 44 406 406 HOH HOH . D 4 HOH A 45 407 407 HOH HOH . D 4 HOH A 46 408 408 HOH HOH . D 4 HOH A 47 409 409 HOH HOH . D 4 HOH A 48 410 410 HOH HOH . D 4 HOH A 49 411 411 HOH HOH . D 4 HOH A 50 412 412 HOH HOH . D 4 HOH A 51 413 413 HOH HOH . D 4 HOH A 52 414 414 HOH HOH . D 4 HOH A 53 415 415 HOH HOH . D 4 HOH A 54 416 416 HOH HOH . D 4 HOH A 55 417 417 HOH HOH . D 4 HOH A 56 418 418 HOH HOH . D 4 HOH A 57 419 419 HOH HOH . D 4 HOH A 58 420 420 HOH HOH . D 4 HOH A 59 421 421 HOH HOH . D 4 HOH A 60 422 422 HOH HOH . D 4 HOH A 61 423 423 HOH HOH . D 4 HOH A 62 424 424 HOH HOH . D 4 HOH A 63 425 425 HOH HOH . D 4 HOH A 64 426 426 HOH HOH . D 4 HOH A 65 427 427 HOH HOH . D 4 HOH A 66 428 428 HOH HOH . D 4 HOH A 67 429 429 HOH HOH . D 4 HOH A 68 430 430 HOH HOH . D 4 HOH A 69 431 431 HOH HOH . D 4 HOH A 70 432 432 HOH HOH . D 4 HOH A 71 433 433 HOH HOH . D 4 HOH A 72 434 434 HOH HOH . D 4 HOH A 73 435 435 HOH HOH . D 4 HOH A 74 436 436 HOH HOH . D 4 HOH A 75 437 437 HOH HOH . D 4 HOH A 76 438 438 HOH HOH . D 4 HOH A 77 439 439 HOH HOH . D 4 HOH A 78 440 440 HOH HOH . D 4 HOH A 79 441 441 HOH HOH . D 4 HOH A 80 442 442 HOH HOH . D 4 HOH A 81 443 443 HOH HOH . D 4 HOH A 82 444 444 HOH HOH . D 4 HOH A 83 445 445 HOH HOH . D 4 HOH A 84 446 446 HOH HOH . D 4 HOH A 85 447 447 HOH HOH . D 4 HOH A 86 448 448 HOH HOH . D 4 HOH A 87 449 449 HOH HOH . D 4 HOH A 88 450 450 HOH HOH . D 4 HOH A 89 451 451 HOH HOH . D 4 HOH A 90 452 452 HOH HOH . D 4 HOH A 91 453 453 HOH HOH . D 4 HOH A 92 454 454 HOH HOH . D 4 HOH A 93 455 455 HOH HOH . D 4 HOH A 94 456 456 HOH HOH . D 4 HOH A 95 457 457 HOH HOH . D 4 HOH A 96 458 458 HOH HOH . D 4 HOH A 97 459 459 HOH HOH . D 4 HOH A 98 460 460 HOH HOH . D 4 HOH A 99 461 461 HOH HOH . D 4 HOH A 100 462 462 HOH HOH . D 4 HOH A 101 463 463 HOH HOH . D 4 HOH A 102 464 464 HOH HOH . D 4 HOH A 103 465 465 HOH HOH . D 4 HOH A 104 466 466 HOH HOH . D 4 HOH A 105 467 467 HOH HOH . D 4 HOH A 106 468 468 HOH HOH . D 4 HOH A 107 469 469 HOH HOH . D 4 HOH A 108 470 470 HOH HOH . D 4 HOH A 109 471 471 HOH HOH . D 4 HOH A 110 472 472 HOH HOH . D 4 HOH A 111 473 473 HOH HOH . D 4 HOH A 112 474 474 HOH HOH . D 4 HOH A 113 475 475 HOH HOH . D 4 HOH A 114 476 476 HOH HOH . D 4 HOH A 115 477 477 HOH HOH . D 4 HOH A 116 478 478 HOH HOH . D 4 HOH A 117 479 479 HOH HOH . D 4 HOH A 118 480 480 HOH HOH . D 4 HOH A 119 481 481 HOH HOH . D 4 HOH A 120 482 482 HOH HOH . D 4 HOH A 121 483 483 HOH HOH . D 4 HOH A 122 484 484 HOH HOH . D 4 HOH A 123 485 485 HOH HOH . D 4 HOH A 124 486 486 HOH HOH . D 4 HOH A 125 487 487 HOH HOH . D 4 HOH A 126 488 488 HOH HOH . D 4 HOH A 127 489 489 HOH HOH . D 4 HOH A 128 490 490 HOH HOH . D 4 HOH A 129 491 491 HOH HOH . D 4 HOH A 130 492 492 HOH HOH . D 4 HOH A 131 493 493 HOH HOH . D 4 HOH A 132 494 494 HOH HOH . D 4 HOH A 133 495 495 HOH HOH . D 4 HOH A 134 496 496 HOH HOH . D 4 HOH A 135 497 497 HOH HOH . D 4 HOH A 136 498 498 HOH HOH . D 4 HOH A 137 499 499 HOH HOH . D 4 HOH A 138 500 500 HOH HOH . D 4 HOH A 139 503 503 HOH HOH . D 4 HOH A 140 504 504 HOH HOH . D 4 HOH A 141 505 505 HOH HOH . D 4 HOH A 142 506 506 HOH HOH . D 4 HOH A 143 507 507 HOH HOH . D 4 HOH A 144 508 508 HOH HOH . D 4 HOH A 145 509 509 HOH HOH . D 4 HOH A 146 510 510 HOH HOH . D 4 HOH A 147 511 511 HOH HOH . D 4 HOH A 148 512 512 HOH HOH . D 4 HOH A 149 513 513 HOH HOH . D 4 HOH A 150 514 514 HOH HOH . D 4 HOH A 151 515 515 HOH HOH . D 4 HOH A 152 516 516 HOH HOH . D 4 HOH A 153 517 517 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 F4C . . . B 2 -0.777 4.106 -14.244 1 58.32 ? N1 F4C 361 A 1 HETATM 2 N N3 F4C . . . B 2 1.94 3.09 -17.268 1 58.01 ? N3 F4C 361 A 1 HETATM 3 C C4 F4C . . . B 2 0.391 6.13 -13.794 1 58.1 ? C4 F4C 361 A 1 HETATM 4 C C5 F4C . . . B 2 4.569 1.442 -20.224 1 65.31 ? C5 F4C 361 A 1 HETATM 5 C C6 F4C . . . B 2 2.185 4.187 -16.542 1 59.59 ? C6 F4C 361 A 1 HETATM 6 C C7 F4C . . . B 2 4.898 1.373 -18.763 1 62.61 ? C7 F4C 361 A 1 HETATM 7 C C8 F4C . . . B 2 -1.921 3.431 -13.774 1 58.31 ? C8 F4C 361 A 1 HETATM 8 C C10 F4C . . . B 2 0.395 7.4 -13.016 1 57.86 ? C10 F4C 361 A 1 HETATM 9 C C13 F4C . . . B 2 -3.095 4.185 -13.731 1 57.92 ? C13 F4C 361 A 1 HETATM 10 C C15 F4C . . . B 2 -4.253 3.625 -13.232 1 55.42 ? C15 F4C 361 A 1 HETATM 11 C C17 F4C . . . B 2 6.075 0.717 -18.383 1 60.38 ? C17 F4C 361 A 1 HETATM 12 C C20 F4C . . . B 2 1.067 8.517 -13.513 1 57.82 ? C20 F4C 361 A 1 HETATM 13 C C21 F4C . . . B 2 -0.341 7.519 -11.843 1 58.14 ? C21 F4C 361 A 1 HETATM 14 C C22 F4C . . . B 2 4.344 1.884 -16.472 1 62.88 ? C22 F4C 361 A 1 HETATM 15 C C24 F4C . . . B 2 5.522 1.244 -16.08 1 63.16 ? C24 F4C 361 A 1 HETATM 16 F F4 F4C . . . B 2 -5.369 1.79 -12.3 1 56.31 ? F4 F4C 361 A 1 HETATM 17 C C14 F4C . . . B 2 -4.234 2.313 -12.772 1 56.71 ? C14 F4C 361 A 1 HETATM 18 C C16 F4C . . . B 2 -3.064 1.554 -12.795 1 56.93 ? C16 F4C 361 A 1 HETATM 19 C C12 F4C . . . B 2 -1.885 2.127 -13.279 1 57.31 ? C12 F4C 361 A 1 HETATM 20 C C2 F4C . . . B 2 0.103 3.714 -15.196 1 58.27 ? C2 F4C 361 A 1 HETATM 21 O O1 F4C . . . B 2 -0.033 2.624 -15.814 1 57.15 ? O1 F4C 361 A 1 HETATM 22 N N2 F4C . . . B 2 -0.612 5.31 -13.562 1 58.62 ? N2 F4C 361 A 1 HETATM 23 C C18 F4C . . . B 2 1.039 9.712 -12.803 1 57.66 ? C18 F4C 361 A 1 HETATM 24 C C19 F4C . . . B 2 -0.343 8.743 -11.172 1 61.08 ? C19 F4C 361 A 1 HETATM 25 N N4 F4C . . . B 2 0.363 9.794 -11.659 1 59.59 ? N4 F4C 361 A 1 HETATM 26 C C3 F4C . . . B 2 1.324 5.773 -14.793 1 60 ? C3 F4C 361 A 1 HETATM 27 C C1 F4C . . . B 2 1.188 4.551 -15.474 1 58.58 ? C1 F4C 361 A 1 HETATM 28 O O2 F4C . . . B 2 3.171 4.91 -16.745 1 60.36 ? O2 F4C 361 A 1 HETATM 29 C C11 F4C . . . B 2 2.77 2.618 -18.332 1 60.78 ? C11 F4C 361 A 1 HETATM 30 C C9 F4C . . . B 2 4.034 1.948 -17.833 1 61.26 ? C9 F4C 361 A 1 HETATM 31 C C23 F4C . . . B 2 6.377 0.65 -17.035 1 62.92 ? C23 F4C 361 A 1 HETATM 32 F F1 F4C . . . B 2 5.664 1.137 -20.907 1 65.18 ? F1 F4C 361 A 1 HETATM 33 F F2 F4C . . . B 2 3.576 0.609 -20.509 1 67.92 ? F2 F4C 361 A 1 HETATM 34 F F3 F4C . . . B 2 4.189 2.679 -20.514 1 68.93 ? F3 F4C 361 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 34 #