data_3K47
#
_model_server_result.job_id            I-DtdfuLCylxauSXY5hm5w 
_model_server_result.datetime_utc      '2024-11-20 08:24:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3k47 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":187}' 
#
_entry.id    3K47 
#
_exptl.entry_id    3K47 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          117.79 
_cell.angle_gamma         90 
_cell.entry_id            3K47 
_cell.length_a            41.432 
_cell.length_b            61.012 
_cell.length_c            43.217 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3K47 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 277 n n 
PA O2A NDP sing 278 n n 
PA O5B NDP sing 279 n n 
PA O3 NDP sing 280 n n 
O2A HOA2 NDP sing 281 n n 
O5B C5B NDP sing 282 n n 
C5B C4B NDP sing 283 n n 
C5B H51A NDP sing 284 n n 
C5B H52A NDP sing 285 n n 
C4B O4B NDP sing 286 n n 
C4B C3B NDP sing 287 n n 
C4B H4B NDP sing 288 n n 
O4B C1B NDP sing 289 n n 
C3B O3B NDP sing 290 n n 
C3B C2B NDP sing 291 n n 
C3B H3B NDP sing 292 n n 
O3B HO3A NDP sing 293 n n 
C2B O2B NDP sing 294 n n 
C2B C1B NDP sing 295 n n 
C2B H2B NDP sing 296 n n 
O2B P2B NDP sing 297 n n 
C1B N9A NDP sing 298 n n 
C1B H1B NDP sing 299 n n 
N9A C8A NDP sing 300 n y 
N9A C4A NDP sing 301 n y 
C8A N7A NDP doub 302 n y 
C8A H8A NDP sing 303 n n 
N7A C5A NDP sing 304 n y 
C5A C6A NDP sing 305 n y 
C5A C4A NDP doub 306 n y 
C6A N6A NDP sing 307 n n 
C6A N1A NDP doub 308 n y 
N6A H61A NDP sing 309 n n 
N6A H62A NDP sing 310 n n 
N1A C2A NDP sing 311 n y 
C2A N3A NDP doub 312 n y 
C2A H2A NDP sing 313 n n 
N3A C4A NDP sing 314 n y 
O3 PN NDP sing 315 n n 
PN O1N NDP doub 316 n n 
PN O2N NDP sing 317 n n 
PN O5D NDP sing 318 n n 
O2N H21N NDP sing 319 n n 
O5D C5D NDP sing 320 n n 
C5D C4D NDP sing 321 n n 
C5D H51N NDP sing 322 n n 
C5D H52N NDP sing 323 n n 
C4D O4D NDP sing 324 n n 
C4D C3D NDP sing 325 n n 
C4D H4D NDP sing 326 n n 
O4D C1D NDP sing 327 n n 
C3D O3D NDP sing 328 n n 
C3D C2D NDP sing 329 n n 
C3D H3D NDP sing 330 n n 
O3D HO3N NDP sing 331 n n 
C2D O2D NDP sing 332 n n 
C2D C1D NDP sing 333 n n 
C2D H2D NDP sing 334 n n 
O2D HO2N NDP sing 335 n n 
C1D N1N NDP sing 336 n n 
C1D H1D NDP sing 337 n n 
N1N C2N NDP sing 338 n n 
N1N C6N NDP sing 339 n n 
C2N C3N NDP doub 340 n n 
C2N H2N NDP sing 341 n n 
C3N C7N NDP sing 342 n n 
C3N C4N NDP sing 343 n n 
C7N O7N NDP doub 344 n n 
C7N N7N NDP sing 345 n n 
N7N H71N NDP sing 346 n n 
N7N H72N NDP sing 347 n n 
C4N C5N NDP sing 348 n n 
C4N H41N NDP sing 349 n n 
C4N H42N NDP sing 350 n n 
C5N C6N NDP doub 351 n n 
C5N H5N NDP sing 352 n n 
C6N H6N NDP sing 353 n n 
P2B O1X NDP doub 354 n n 
P2B O2X NDP sing 355 n n 
P2B O3X NDP sing 356 n n 
O2X HOP2 NDP sing 357 n n 
O3X HOP3 NDP sing 358 n n 
#
_atom_sites.entry_id                     3K47 
_atom_sites.fract_transf_matrix[1][1]    0.024136 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.012717 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01639 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026154 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 D09 A 1 188 188 D09 D09 . 
C 3 NDP A 1 187 187 NDP NDP . 
D 4 HOH A 1 189 189 HOH HOH . 
D 4 HOH A 2 190 190 HOH HOH . 
D 4 HOH A 3 191 191 HOH HOH . 
D 4 HOH A 4 192 192 HOH HOH . 
D 4 HOH A 5 193 193 HOH HOH . 
D 4 HOH A 6 194 194 HOH HOH . 
D 4 HOH A 7 195 195 HOH HOH . 
D 4 HOH A 8 196 196 HOH HOH . 
D 4 HOH A 9 197 197 HOH HOH . 
D 4 HOH A 10 198 198 HOH HOH . 
D 4 HOH A 11 199 199 HOH HOH . 
D 4 HOH A 12 200 200 HOH HOH . 
D 4 HOH A 13 201 201 HOH HOH . 
D 4 HOH A 14 202 202 HOH HOH . 
D 4 HOH A 15 203 203 HOH HOH . 
D 4 HOH A 16 204 204 HOH HOH . 
D 4 HOH A 17 205 205 HOH HOH . 
D 4 HOH A 18 206 206 HOH HOH . 
D 4 HOH A 19 207 207 HOH HOH . 
D 4 HOH A 20 208 208 HOH HOH . 
D 4 HOH A 21 209 209 HOH HOH . 
D 4 HOH A 22 210 210 HOH HOH . 
D 4 HOH A 23 211 211 HOH HOH . 
D 4 HOH A 24 212 212 HOH HOH . 
D 4 HOH A 25 213 213 HOH HOH . 
D 4 HOH A 26 214 214 HOH HOH . 
D 4 HOH A 27 215 215 HOH HOH . 
D 4 HOH A 28 216 216 HOH HOH . 
D 4 HOH A 29 217 217 HOH HOH . 
D 4 HOH A 30 218 218 HOH HOH . 
D 4 HOH A 31 219 219 HOH HOH . 
D 4 HOH A 32 220 220 HOH HOH . 
D 4 HOH A 33 221 221 HOH HOH . 
D 4 HOH A 34 222 222 HOH HOH . 
D 4 HOH A 35 223 223 HOH HOH . 
D 4 HOH A 36 224 224 HOH HOH . 
D 4 HOH A 37 225 225 HOH HOH . 
D 4 HOH A 38 226 226 HOH HOH . 
D 4 HOH A 39 227 227 HOH HOH . 
D 4 HOH A 40 228 228 HOH HOH . 
D 4 HOH A 41 229 229 HOH HOH . 
D 4 HOH A 42 230 230 HOH HOH . 
D 4 HOH A 43 231 231 HOH HOH . 
D 4 HOH A 44 232 232 HOH HOH . 
D 4 HOH A 45 233 233 HOH HOH . 
D 4 HOH A 46 234 234 HOH HOH . 
D 4 HOH A 47 235 235 HOH HOH . 
D 4 HOH A 48 236 236 HOH HOH . 
D 4 HOH A 49 237 237 HOH HOH . 
D 4 HOH A 50 238 238 HOH HOH . 
D 4 HOH A 51 239 239 HOH HOH . 
D 4 HOH A 52 240 240 HOH HOH . 
D 4 HOH A 53 241 241 HOH HOH . 
D 4 HOH A 54 242 242 HOH HOH . 
D 4 HOH A 55 243 243 HOH HOH . 
D 4 HOH A 56 244 244 HOH HOH . 
D 4 HOH A 57 245 245 HOH HOH . 
D 4 HOH A 58 246 246 HOH HOH . 
D 4 HOH A 59 247 247 HOH HOH . 
D 4 HOH A 60 248 248 HOH HOH . 
D 4 HOH A 61 249 249 HOH HOH . 
D 4 HOH A 62 250 250 HOH HOH . 
D 4 HOH A 63 251 251 HOH HOH . 
D 4 HOH A 64 252 252 HOH HOH . 
D 4 HOH A 65 253 253 HOH HOH . 
D 4 HOH A 66 254 254 HOH HOH . 
D 4 HOH A 67 255 255 HOH HOH . 
D 4 HOH A 68 256 256 HOH HOH . 
D 4 HOH A 69 257 257 HOH HOH . 
D 4 HOH A 70 258 258 HOH HOH . 
D 4 HOH A 71 259 259 HOH HOH . 
D 4 HOH A 72 260 260 HOH HOH . 
D 4 HOH A 73 261 261 HOH HOH . 
D 4 HOH A 74 262 262 HOH HOH . 
D 4 HOH A 75 263 263 HOH HOH . 
D 4 HOH A 76 264 264 HOH HOH . 
D 4 HOH A 77 265 265 HOH HOH . 
D 4 HOH A 78 266 266 HOH HOH . 
D 4 HOH A 79 267 267 HOH HOH . 
D 4 HOH A 80 268 268 HOH HOH . 
D 4 HOH A 81 269 269 HOH HOH . 
D 4 HOH A 82 270 270 HOH HOH . 
D 4 HOH A 83 271 271 HOH HOH . 
D 4 HOH A 84 272 272 HOH HOH . 
D 4 HOH A 85 273 273 HOH HOH . 
D 4 HOH A 86 274 274 HOH HOH . 
D 4 HOH A 87 275 275 HOH HOH . 
D 4 HOH A 88 276 276 HOH HOH . 
D 4 HOH A 89 277 277 HOH HOH . 
D 4 HOH A 90 278 278 HOH HOH . 
D 4 HOH A 91 279 279 HOH HOH . 
D 4 HOH A 92 280 280 HOH HOH . 
D 4 HOH A 93 281 281 HOH HOH . 
D 4 HOH A 94 282 282 HOH HOH . 
D 4 HOH A 95 283 283 HOH HOH . 
D 4 HOH A 96 284 284 HOH HOH . 
D 4 HOH A 97 285 285 HOH HOH . 
D 4 HOH A 98 286 286 HOH HOH . 
D 4 HOH A 99 287 287 HOH HOH . 
D 4 HOH A 100 288 288 HOH HOH . 
D 4 HOH A 101 289 289 HOH HOH . 
D 4 HOH A 102 290 290 HOH HOH . 
D 4 HOH A 103 291 291 HOH HOH . 
D 4 HOH A 104 292 292 HOH HOH . 
D 4 HOH A 105 293 293 HOH HOH . 
D 4 HOH A 106 294 294 HOH HOH . 
D 4 HOH A 107 295 295 HOH HOH . 
D 4 HOH A 108 296 296 HOH HOH . 
D 4 HOH A 109 297 297 HOH HOH . 
D 4 HOH A 110 298 298 HOH HOH . 
D 4 HOH A 111 299 299 HOH HOH . 
D 4 HOH A 112 300 300 HOH HOH . 
D 4 HOH A 113 301 301 HOH HOH . 
D 4 HOH A 114 302 302 HOH HOH . 
D 4 HOH A 115 303 303 HOH HOH . 
D 4 HOH A 116 304 304 HOH HOH . 
D 4 HOH A 117 305 305 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . C 3 -2.189 -9.077 16.888 1 24.02 ? PA NDP 187 A 1 
HETATM 2 O O1A NDP . . . C 3 -3.03 -8.134 16.064 1 21.51 ? O1A NDP 187 A 1 
HETATM 3 O O2A NDP . . . C 3 -0.803 -9.26 16.538 1 22.03 ? O2A NDP 187 A 1 
HETATM 4 O O5B NDP . . . C 3 -2.874 -10.472 16.862 1 25.09 ? O5B NDP 187 A 1 
HETATM 5 C C5B NDP . . . C 3 -2.235 -11.574 17.296 1 19.68 ? C5B NDP 187 A 1 
HETATM 6 C C4B NDP . . . C 3 -2.859 -12.7 16.583 1 22.21 ? C4B NDP 187 A 1 
HETATM 7 O O4B NDP . . . C 3 -2.601 -12.476 15.07 1 21.01 ? O4B NDP 187 A 1 
HETATM 8 C C3B NDP . . . C 3 -2.415 -14.197 16.884 1 25.32 ? C3B NDP 187 A 1 
HETATM 9 O O3B NDP . . . C 3 -3.186 -14.674 17.958 1 26.28 ? O3B NDP 187 A 1 
HETATM 10 C C2B NDP . . . C 3 -3.188 -14.375 15.602 1 29.06 ? C2B NDP 187 A 1 
HETATM 11 O O2B NDP . . . C 3 -3.989 -15.426 15.198 1 22.05 ? O2B NDP 187 A 1 
HETATM 12 C C1B NDP . . . C 3 -2.309 -13.793 14.497 1 23.69 ? C1B NDP 187 A 1 
HETATM 13 N N9A NDP . . . C 3 -0.794 -13.801 14.301 1 26.74 ? N9A NDP 187 A 1 
HETATM 14 C C8A NDP . . . C 3 0.136 -13.004 14.894 1 27.03 ? C8A NDP 187 A 1 
HETATM 15 N N7A NDP . . . C 3 1.342 -13.276 14.386 1 28.16 ? N7A NDP 187 A 1 
HETATM 16 C C5A NDP . . . C 3 1.146 -14.238 13.433 1 27.09 ? C5A NDP 187 A 1 
HETATM 17 C C6A NDP . . . C 3 1.985 -14.954 12.584 1 24.42 ? C6A NDP 187 A 1 
HETATM 18 N N6A NDP . . . C 3 3.282 -14.71 12.587 1 23.5 ? N6A NDP 187 A 1 
HETATM 19 N N1A NDP . . . C 3 1.462 -15.865 11.735 1 25.73 ? N1A NDP 187 A 1 
HETATM 20 C C2A NDP . . . C 3 0.178 -16.117 11.728 1 24.6 ? C2A NDP 187 A 1 
HETATM 21 N N3A NDP . . . C 3 -0.65 -15.461 12.518 1 25 ? N3A NDP 187 A 1 
HETATM 22 C C4A NDP . . . C 3 -0.188 -14.55 13.4 1 24.34 ? C4A NDP 187 A 1 
HETATM 23 O O3 NDP . . . C 3 -2.509 -8.692 18.432 1 26.75 ? O3 NDP 187 A 1 
HETATM 24 P PN NDP . . . C 3 -1.577 -8.346 19.682 1 36.49 ? PN NDP 187 A 1 
HETATM 25 O O1N NDP . . . C 3 -0.212 -8.856 19.468 1 40.81 ? O1N NDP 187 A 1 
HETATM 26 O O2N NDP . . . C 3 -2.298 -8.723 20.948 1 37.34 ? O2N NDP 187 A 1 
HETATM 27 O O5D NDP . . . C 3 -1.579 -6.87 19.556 1 38.64 ? O5D NDP 187 A 1 
HETATM 28 C C5D NDP . . . C 3 -2.811 -6.124 19.492 1 43.43 ? C5D NDP 187 A 1 
HETATM 29 C C4D NDP . . . C 3 -2.686 -4.868 20.38 1 42.07 ? C4D NDP 187 A 1 
HETATM 30 O O4D NDP . . . C 3 -1.947 -3.843 19.686 1 41.36 ? O4D NDP 187 A 1 
HETATM 31 C C3D NDP . . . C 3 -4.09 -4.302 20.691 1 45.53 ? C3D NDP 187 A 1 
HETATM 32 O O3D NDP . . . C 3 -4.027 -3.802 22.045 1 44.52 ? O3D NDP 187 A 1 
HETATM 33 C C2D NDP . . . C 3 -4.263 -3.208 19.603 1 44.48 ? C2D NDP 187 A 1 
HETATM 34 O O2D NDP . . . C 3 -5.131 -2.127 20.02 1 47.9 ? O2D NDP 187 A 1 
HETATM 35 C C1D NDP . . . C 3 -2.828 -2.704 19.505 1 40.7 ? C1D NDP 187 A 1 
HETATM 36 N N1N NDP . . . C 3 -2.402 -2.062 18.248 1 39.62 ? N1N NDP 187 A 1 
HETATM 37 C C2N NDP . . . C 3 -1.688 -0.89 18.467 1 38.63 ? C2N NDP 187 A 1 
HETATM 38 C C3N NDP . . . C 3 -1.14 -0.157 17.437 1 35.24 ? C3N NDP 187 A 1 
HETATM 39 C C7N NDP . . . C 3 -0.385 1.152 17.752 1 33.81 ? C7N NDP 187 A 1 
HETATM 40 O O7N NDP . . . C 3 -0.002 1.828 16.822 1 28.83 ? O7N NDP 187 A 1 
HETATM 41 N N7N NDP . . . C 3 -0.185 1.499 19.054 1 30.28 ? N7N NDP 187 A 1 
HETATM 42 C C4N NDP . . . C 3 -1.334 -0.627 16.148 1 38.01 ? C4N NDP 187 A 1 
HETATM 43 C C5N NDP . . . C 3 -2.025 -1.814 15.915 1 37.94 ? C5N NDP 187 A 1 
HETATM 44 C C6N NDP . . . C 3 -2.565 -2.554 16.969 1 37.1 ? C6N NDP 187 A 1 
HETATM 45 P P2B NDP . . . C 3 -4.736 -16.611 15.713 1 25.72 ? P2B NDP 187 A 1 
HETATM 46 O O1X NDP . . . C 3 -6.116 -16.296 14.825 1 17.8 ? O1X NDP 187 A 1 
HETATM 47 O O2X NDP . . . C 3 -5.222 -16.501 17.213 1 21.79 ? O2X NDP 187 A 1 
HETATM 48 O O3X NDP . . . C 3 -3.801 -17.684 15.24 1 28.54 ? O3X NDP 187 A 1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           48 
#