data_3K4S # _model_server_result.job_id 6GqvfOg4XAO9hPQV72tLYA _model_server_result.datetime_utc '2024-11-29 12:29:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k4s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":415}' # _entry.id 3K4S # _exptl.entry_id 3K4S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3K4S _cell.length_a 83.217 _cell.length_b 83.217 _cell.length_c 148.766 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K4S _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 x,-y,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 0 74.383 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B ZN ZN . A ZN 1 1_555 A NE2 HIS 100 A HIS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc2 B ZN ZN . A ZN 1 1_555 A NE2 HIS 136 A HIS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc3 B ZN ZN . A ZN 1 1_555 A OD2 ASP 137 A ASP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc4 B ZN ZN . A ZN 1 1_555 A OD1 ASP 254 A ASP 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc5 B ZN ZN . A ZN 1 1_555 E O HOH . A HOH 547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc6 A OD1 ASP 137 A ASP 201 1_555 D MG MG . A MG 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc7 D MG MG . A MG 415 1_555 E O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc8 D MG MG . A MG 415 1_555 E O HOH . A HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc9 D MG MG . A MG 415 1_555 E O HOH . A HOH 547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc10 D MG MG . A MG 415 1_555 E O HOH . A HOH 548 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3K4S _atom_sites.fract_transf_matrix[1][1] 0.012017 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012017 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006722 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 1 1 ZN ZN . C 3 0MO A 1 414 1 0MO MOL . D 4 MG A 1 415 1 MG MG . E 5 HOH A 1 2 2 HOH HOH . E 5 HOH A 2 5 5 HOH HOH . E 5 HOH A 3 6 6 HOH HOH . E 5 HOH A 4 7 7 HOH HOH . E 5 HOH A 5 8 8 HOH HOH . E 5 HOH A 6 9 9 HOH HOH . E 5 HOH A 7 10 10 HOH HOH . E 5 HOH A 8 11 11 HOH HOH . E 5 HOH A 9 12 12 HOH HOH . E 5 HOH A 10 13 13 HOH HOH . E 5 HOH A 11 14 14 HOH HOH . E 5 HOH A 12 15 15 HOH HOH . E 5 HOH A 13 16 16 HOH HOH . E 5 HOH A 14 17 17 HOH HOH . E 5 HOH A 15 19 19 HOH HOH . E 5 HOH A 16 20 20 HOH HOH . E 5 HOH A 17 21 21 HOH HOH . E 5 HOH A 18 22 22 HOH HOH . E 5 HOH A 19 23 23 HOH HOH . E 5 HOH A 20 24 24 HOH HOH . E 5 HOH A 21 25 25 HOH HOH . E 5 HOH A 22 26 26 HOH HOH . E 5 HOH A 23 27 27 HOH HOH . E 5 HOH A 24 28 28 HOH HOH . E 5 HOH A 25 29 29 HOH HOH . E 5 HOH A 26 30 30 HOH HOH . E 5 HOH A 27 31 31 HOH HOH . E 5 HOH A 28 32 32 HOH HOH . E 5 HOH A 29 33 33 HOH HOH . E 5 HOH A 30 34 34 HOH HOH . E 5 HOH A 31 35 35 HOH HOH . E 5 HOH A 32 36 36 HOH HOH . E 5 HOH A 33 37 37 HOH HOH . E 5 HOH A 34 38 38 HOH HOH . E 5 HOH A 35 39 39 HOH HOH . E 5 HOH A 36 40 40 HOH HOH . E 5 HOH A 37 41 41 HOH HOH . E 5 HOH A 38 42 42 HOH HOH . E 5 HOH A 39 43 43 HOH HOH . E 5 HOH A 40 44 44 HOH HOH . E 5 HOH A 41 45 45 HOH HOH . E 5 HOH A 42 46 46 HOH HOH . E 5 HOH A 43 47 47 HOH HOH . E 5 HOH A 44 48 48 HOH HOH . E 5 HOH A 45 49 49 HOH HOH . E 5 HOH A 46 50 50 HOH HOH . E 5 HOH A 47 51 51 HOH HOH . E 5 HOH A 48 52 52 HOH HOH . E 5 HOH A 49 53 53 HOH HOH . E 5 HOH A 50 54 54 HOH HOH . E 5 HOH A 51 55 55 HOH HOH . E 5 HOH A 52 56 56 HOH HOH . E 5 HOH A 53 57 57 HOH HOH . E 5 HOH A 54 58 58 HOH HOH . E 5 HOH A 55 59 59 HOH HOH . E 5 HOH A 56 60 60 HOH HOH . E 5 HOH A 57 61 61 HOH HOH . E 5 HOH A 58 62 62 HOH HOH . E 5 HOH A 59 63 63 HOH HOH . E 5 HOH A 60 416 1 HOH HOH . E 5 HOH A 61 417 65 HOH HOH . E 5 HOH A 62 418 66 HOH HOH . E 5 HOH A 63 419 67 HOH HOH . E 5 HOH A 64 420 68 HOH HOH . E 5 HOH A 65 421 69 HOH HOH . E 5 HOH A 66 422 70 HOH HOH . E 5 HOH A 67 423 71 HOH HOH . E 5 HOH A 68 424 72 HOH HOH . E 5 HOH A 69 425 73 HOH HOH . E 5 HOH A 70 426 74 HOH HOH . E 5 HOH A 71 427 75 HOH HOH . E 5 HOH A 72 428 76 HOH HOH . E 5 HOH A 73 429 77 HOH HOH . E 5 HOH A 74 430 78 HOH HOH . E 5 HOH A 75 431 79 HOH HOH . E 5 HOH A 76 432 80 HOH HOH . E 5 HOH A 77 433 81 HOH HOH . E 5 HOH A 78 434 82 HOH HOH . E 5 HOH A 79 435 83 HOH HOH . E 5 HOH A 80 436 84 HOH HOH . E 5 HOH A 81 437 85 HOH HOH . E 5 HOH A 82 438 86 HOH HOH . E 5 HOH A 83 439 87 HOH HOH . E 5 HOH A 84 440 89 HOH HOH . E 5 HOH A 85 441 90 HOH HOH . E 5 HOH A 86 442 92 HOH HOH . E 5 HOH A 87 443 93 HOH HOH . E 5 HOH A 88 444 94 HOH HOH . E 5 HOH A 89 445 95 HOH HOH . E 5 HOH A 90 446 96 HOH HOH . E 5 HOH A 91 447 97 HOH HOH . E 5 HOH A 92 448 98 HOH HOH . E 5 HOH A 93 449 100 HOH HOH . E 5 HOH A 94 450 101 HOH HOH . E 5 HOH A 95 451 102 HOH HOH . E 5 HOH A 96 452 103 HOH HOH . E 5 HOH A 97 453 107 HOH HOH . E 5 HOH A 98 454 108 HOH HOH . E 5 HOH A 99 455 109 HOH HOH . E 5 HOH A 100 456 110 HOH HOH . E 5 HOH A 101 457 111 HOH HOH . E 5 HOH A 102 458 112 HOH HOH . E 5 HOH A 103 459 113 HOH HOH . E 5 HOH A 104 460 114 HOH HOH . E 5 HOH A 105 461 115 HOH HOH . E 5 HOH A 106 462 116 HOH HOH . E 5 HOH A 107 463 117 HOH HOH . E 5 HOH A 108 464 118 HOH HOH . E 5 HOH A 109 465 119 HOH HOH . E 5 HOH A 110 466 120 HOH HOH . E 5 HOH A 111 467 126 HOH HOH . E 5 HOH A 112 468 127 HOH HOH . E 5 HOH A 113 469 128 HOH HOH . E 5 HOH A 114 470 129 HOH HOH . E 5 HOH A 115 471 131 HOH HOH . E 5 HOH A 116 472 133 HOH HOH . E 5 HOH A 117 473 134 HOH HOH . E 5 HOH A 118 474 135 HOH HOH . E 5 HOH A 119 475 136 HOH HOH . E 5 HOH A 120 476 137 HOH HOH . E 5 HOH A 121 477 138 HOH HOH . E 5 HOH A 122 478 139 HOH HOH . E 5 HOH A 123 479 140 HOH HOH . E 5 HOH A 124 480 141 HOH HOH . E 5 HOH A 125 481 143 HOH HOH . E 5 HOH A 126 482 144 HOH HOH . E 5 HOH A 127 483 145 HOH HOH . E 5 HOH A 128 484 147 HOH HOH . E 5 HOH A 129 485 148 HOH HOH . E 5 HOH A 130 486 149 HOH HOH . E 5 HOH A 131 487 150 HOH HOH . E 5 HOH A 132 488 152 HOH HOH . E 5 HOH A 133 489 153 HOH HOH . E 5 HOH A 134 490 154 HOH HOH . E 5 HOH A 135 491 155 HOH HOH . E 5 HOH A 136 492 157 HOH HOH . E 5 HOH A 137 493 158 HOH HOH . E 5 HOH A 138 494 161 HOH HOH . E 5 HOH A 139 495 162 HOH HOH . E 5 HOH A 140 496 163 HOH HOH . E 5 HOH A 141 497 164 HOH HOH . E 5 HOH A 142 498 165 HOH HOH . E 5 HOH A 143 499 166 HOH HOH . E 5 HOH A 144 500 168 HOH HOH . E 5 HOH A 145 501 169 HOH HOH . E 5 HOH A 146 502 170 HOH HOH . E 5 HOH A 147 503 172 HOH HOH . E 5 HOH A 148 504 173 HOH HOH . E 5 HOH A 149 505 178 HOH HOH . E 5 HOH A 150 506 179 HOH HOH . E 5 HOH A 151 507 180 HOH HOH . E 5 HOH A 152 508 182 HOH HOH . E 5 HOH A 153 509 184 HOH HOH . E 5 HOH A 154 510 188 HOH HOH . E 5 HOH A 155 511 189 HOH HOH . E 5 HOH A 156 512 190 HOH HOH . E 5 HOH A 157 513 191 HOH HOH . E 5 HOH A 158 514 192 HOH HOH . E 5 HOH A 159 515 193 HOH HOH . E 5 HOH A 160 516 194 HOH HOH . E 5 HOH A 161 517 195 HOH HOH . E 5 HOH A 162 518 196 HOH HOH . E 5 HOH A 163 519 197 HOH HOH . E 5 HOH A 164 520 198 HOH HOH . E 5 HOH A 165 521 199 HOH HOH . E 5 HOH A 166 522 202 HOH HOH . E 5 HOH A 167 523 204 HOH HOH . E 5 HOH A 168 524 205 HOH HOH . E 5 HOH A 169 525 210 HOH HOH . E 5 HOH A 170 526 211 HOH HOH . E 5 HOH A 171 527 212 HOH HOH . E 5 HOH A 172 528 213 HOH HOH . E 5 HOH A 173 529 214 HOH HOH . E 5 HOH A 174 530 215 HOH HOH . E 5 HOH A 175 531 216 HOH HOH . E 5 HOH A 176 532 218 HOH HOH . E 5 HOH A 177 533 220 HOH HOH . E 5 HOH A 178 534 221 HOH HOH . E 5 HOH A 179 535 223 HOH HOH . E 5 HOH A 180 536 224 HOH HOH . E 5 HOH A 181 537 225 HOH HOH . E 5 HOH A 182 538 226 HOH HOH . E 5 HOH A 183 539 227 HOH HOH . E 5 HOH A 184 540 228 HOH HOH . E 5 HOH A 185 541 229 HOH HOH . E 5 HOH A 186 542 230 HOH HOH . E 5 HOH A 187 543 231 HOH HOH . E 5 HOH A 188 544 232 HOH HOH . E 5 HOH A 189 545 233 HOH HOH . E 5 HOH A 190 546 234 HOH HOH . E 5 HOH A 191 547 235 HOH HOH . E 5 HOH A 192 548 236 HOH HOH . E 5 HOH A 193 549 237 HOH HOH . E 5 HOH A 194 550 238 HOH HOH . E 5 HOH A 195 551 239 HOH HOH . E 5 HOH A 196 552 241 HOH HOH . E 5 HOH A 197 553 242 HOH HOH . E 5 HOH A 198 554 243 HOH HOH . E 5 HOH A 199 555 244 HOH HOH . E 5 HOH A 200 556 245 HOH HOH . E 5 HOH A 201 557 246 HOH HOH . E 5 HOH A 202 558 247 HOH HOH . E 5 HOH A 203 559 248 HOH HOH . E 5 HOH A 204 560 250 HOH HOH . E 5 HOH A 205 561 251 HOH HOH . E 5 HOH A 206 562 252 HOH HOH . E 5 HOH A 207 563 253 HOH HOH . E 5 HOH A 208 564 254 HOH HOH . E 5 HOH A 209 565 255 HOH HOH . E 5 HOH A 210 566 256 HOH HOH . E 5 HOH A 211 567 257 HOH HOH . E 5 HOH A 212 568 258 HOH HOH . E 5 HOH A 213 569 259 HOH HOH . E 5 HOH A 214 570 261 HOH HOH . E 5 HOH A 215 571 262 HOH HOH . E 5 HOH A 216 572 263 HOH HOH . E 5 HOH A 217 573 265 HOH HOH . E 5 HOH A 218 574 266 HOH HOH . E 5 HOH A 219 575 267 HOH HOH . E 5 HOH A 220 576 268 HOH HOH . E 5 HOH A 221 577 270 HOH HOH . E 5 HOH A 222 578 272 HOH HOH . E 5 HOH A 223 579 273 HOH HOH . E 5 HOH A 224 580 274 HOH HOH . E 5 HOH A 225 581 275 HOH HOH . E 5 HOH A 226 582 276 HOH HOH . E 5 HOH A 227 583 277 HOH HOH . E 5 HOH A 228 584 278 HOH HOH . E 5 HOH A 229 585 281 HOH HOH . E 5 HOH A 230 586 282 HOH HOH . E 5 HOH A 231 587 283 HOH HOH . E 5 HOH A 232 588 284 HOH HOH . E 5 HOH A 233 589 285 HOH HOH . E 5 HOH A 234 590 288 HOH HOH . E 5 HOH A 235 591 289 HOH HOH . E 5 HOH A 236 592 290 HOH HOH . E 5 HOH A 237 593 291 HOH HOH . E 5 HOH A 238 594 292 HOH HOH . E 5 HOH A 239 595 293 HOH HOH . E 5 HOH A 240 596 294 HOH HOH . E 5 HOH A 241 597 295 HOH HOH . E 5 HOH A 242 598 296 HOH HOH . E 5 HOH A 243 599 297 HOH HOH . E 5 HOH A 244 600 298 HOH HOH . E 5 HOH A 245 601 299 HOH HOH . E 5 HOH A 246 602 300 HOH HOH . E 5 HOH A 247 603 301 HOH HOH . E 5 HOH A 248 604 302 HOH HOH . E 5 HOH A 249 605 303 HOH HOH . E 5 HOH A 250 606 304 HOH HOH . E 5 HOH A 251 607 305 HOH HOH . E 5 HOH A 252 608 306 HOH HOH . E 5 HOH A 253 609 307 HOH HOH . E 5 HOH A 254 610 308 HOH HOH . E 5 HOH A 255 611 309 HOH HOH . E 5 HOH A 256 612 310 HOH HOH . E 5 HOH A 257 613 311 HOH HOH . E 5 HOH A 258 614 312 HOH HOH . E 5 HOH A 259 615 313 HOH HOH . E 5 HOH A 260 616 314 HOH HOH . E 5 HOH A 261 617 315 HOH HOH . E 5 HOH A 262 618 316 HOH HOH . E 5 HOH A 263 619 317 HOH HOH . E 5 HOH A 264 620 318 HOH HOH . E 5 HOH A 265 621 319 HOH HOH . E 5 HOH A 266 622 320 HOH HOH . E 5 HOH A 267 623 321 HOH HOH . E 5 HOH A 268 624 322 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x 27.916 _atom_site.Cartn_y -1.658 _atom_site.Cartn_z 22.099 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 52.41 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 415 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #