data_3K6H # _model_server_result.job_id gqayoFBhSctxx8yQ5uYrNg _model_server_result.datetime_utc '2024-10-19 21:26:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":199}' # _entry.id 3K6H # _exptl.entry_id 3K6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3K6H _cell.length_a 127.47 _cell.length_b 127.47 _cell.length_c 150.983 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 120 A VAL 118 1_555 A N MSE 121 A MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 121 A MSE 119 1_555 A N SER 122 A SER 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C VAL 120 B VAL 118 1_555 B N MSE 121 B MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 B C MSE 121 B MSE 119 1_555 B N SER 122 B SER 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # _atom_sites.entry_id 3K6H _atom_sites.fract_transf_matrix[1][1] 0.007845 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007845 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 196 2 SO4 SO4 . D 2 SO4 A 1 197 4 SO4 SO4 . E 2 SO4 A 1 198 5 SO4 SO4 . F 3 FMN A 1 199 2 FMN FMN . G 2 SO4 B 1 196 1 SO4 SO4 . H 2 SO4 B 1 197 3 SO4 SO4 . I 2 SO4 B 1 198 6 SO4 SO4 . J 2 SO4 B 1 199 7 SO4 SO4 . K 3 FMN B 1 200 1 FMN FMN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . F 3 56.819 22.865 56.33 1 83.44 ? N1 FMN 199 A 1 HETATM 2 C C2 FMN . . . F 3 57.237 21.453 56.755 1 97.71 ? C2 FMN 199 A 1 HETATM 3 O O2 FMN . . . F 3 58.58 21.213 57.063 1 107.46 ? O2 FMN 199 A 1 HETATM 4 N N3 FMN . . . F 3 56.2 20.324 56.825 1 99.45 ? N3 FMN 199 A 1 HETATM 5 C C4 FMN . . . F 3 54.798 20.594 56.479 1 94.03 ? C4 FMN 199 A 1 HETATM 6 O O4 FMN . . . F 3 53.822 19.598 56.49 1 104.91 ? O4 FMN 199 A 1 HETATM 7 C C4A FMN . . . F 3 54.39 21.99 56.062 1 75.57 ? C4A FMN 199 A 1 HETATM 8 N N5 FMN . . . F 3 52.889 22.27 55.696 1 71.25 ? N5 FMN 199 A 1 HETATM 9 C C5A FMN . . . F 3 52.477 23.649 55.277 1 62.93 ? C5A FMN 199 A 1 HETATM 10 C C6 FMN . . . F 3 50.959 23.948 54.893 1 95.13 ? C6 FMN 199 A 1 HETATM 11 C C7 FMN . . . F 3 50.536 25.429 54.446 1 58.71 ? C7 FMN 199 A 1 HETATM 12 C C7M FMN . . . F 3 49.065 25.705 54.078 1 65.07 ? C7M FMN 199 A 1 HETATM 13 C C8 FMN . . . F 3 51.623 26.592 54.391 1 67.16 ? C8 FMN 199 A 1 HETATM 14 C C8M FMN . . . F 3 51.216 28.026 53.987 1 71.55 ? C8M FMN 199 A 1 HETATM 15 C C9 FMN . . . F 3 53.144 26.3 54.769 1 53.08 ? C9 FMN 199 A 1 HETATM 16 C C9A FMN . . . F 3 53.544 24.809 55.21 1 67.02 ? C9A FMN 199 A 1 HETATM 17 N N10 FMN . . . F 3 54.996 24.518 55.566 1 72.45 ? N10 FMN 199 A 1 HETATM 18 C C10 FMN . . . F 3 55.435 23.118 55.994 1 72.25 ? C10 FMN 199 A 1 HETATM 19 C C1' FMN . . . F 3 55.972 25.611 55.52 1 83.7 ? C1' FMN 199 A 1 HETATM 20 C C2' FMN . . . F 3 56.136 26.351 56.857 1 89.28 ? C2' FMN 199 A 1 HETATM 21 O O2' FMN . . . F 3 55.206 26.614 57.526 1 98.58 ? O2' FMN 199 A 1 HETATM 22 C C3' FMN . . . F 3 57.374 27.23 56.995 1 86.05 ? C3' FMN 199 A 1 HETATM 23 O O3' FMN . . . F 3 57.485 27.577 58.347 1 84.46 ? O3' FMN 199 A 1 HETATM 24 C C4' FMN . . . F 3 57.151 28.473 56.112 1 83.31 ? C4' FMN 199 A 1 HETATM 25 O O4' FMN . . . F 3 57.564 28.15 54.803 1 70.8 ? O4' FMN 199 A 1 HETATM 26 C C5' FMN . . . F 3 58.1 29.547 56.698 1 99.71 ? C5' FMN 199 A 1 HETATM 27 O O5' FMN . . . F 3 57.707 30.851 56.315 1 106.82 ? O5' FMN 199 A 1 HETATM 28 P P FMN . . . F 3 58.201 32.093 57.299 1 76.77 ? P FMN 199 A 1 HETATM 29 O O1P FMN . . . F 3 57.943 33.551 56.564 1 123.85 ? O1P FMN 199 A 1 HETATM 30 O O2P FMN . . . F 3 59.813 31.916 57.615 1 162.18 ? O2P FMN 199 A 1 HETATM 31 O O3P FMN . . . F 3 57.441 32.009 58.538 1 72.79 ? O3P FMN 199 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 31 #