data_3K6H # _model_server_result.job_id 0B1Xe2X6Sbt5dIKbm5NX3g _model_server_result.datetime_utc '2024-10-19 21:28:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":200}' # _entry.id 3K6H # _exptl.entry_id 3K6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3K6H _cell.length_a 127.47 _cell.length_b 127.47 _cell.length_c 150.983 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 120 A VAL 118 1_555 A N MSE 121 A MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C MSE 121 A MSE 119 1_555 A N SER 122 A SER 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C VAL 120 B VAL 118 1_555 B N MSE 121 B MSE 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 B C MSE 121 B MSE 119 1_555 B N SER 122 B SER 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # _atom_sites.entry_id 3K6H _atom_sites.fract_transf_matrix[1][1] 0.007845 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007845 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006623 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 196 2 SO4 SO4 . D 2 SO4 A 1 197 4 SO4 SO4 . E 2 SO4 A 1 198 5 SO4 SO4 . F 3 FMN A 1 199 2 FMN FMN . G 2 SO4 B 1 196 1 SO4 SO4 . H 2 SO4 B 1 197 3 SO4 SO4 . I 2 SO4 B 1 198 6 SO4 SO4 . J 2 SO4 B 1 199 7 SO4 SO4 . K 3 FMN B 1 200 1 FMN FMN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . K 3 33.65 43.362 51.151 1 83.51 ? N1 FMN 200 B 1 HETATM 2 C C2 FMN . . . K 3 32.823 44.174 50.159 1 85.22 ? C2 FMN 200 B 1 HETATM 3 O O2 FMN . . . K 3 31.996 45.204 50.622 1 92.76 ? O2 FMN 200 B 1 HETATM 4 N N3 FMN . . . K 3 32.919 43.849 48.673 1 88.59 ? N3 FMN 200 B 1 HETATM 5 C C4 FMN . . . K 3 33.778 42.768 48.191 1 82.93 ? C4 FMN 200 B 1 HETATM 6 O O4 FMN . . . K 3 33.812 42.43 46.841 1 96.84 ? O4 FMN 200 B 1 HETATM 7 C C4A FMN . . . K 3 34.594 41.972 49.18 1 67.18 ? C4A FMN 200 B 1 HETATM 8 N N5 FMN . . . K 3 35.522 40.808 48.69 1 68.69 ? N5 FMN 200 B 1 HETATM 9 C C5A FMN . . . K 3 36.321 40.024 49.682 1 63.29 ? C5A FMN 200 B 1 HETATM 10 C C6 FMN . . . K 3 37.263 38.833 49.193 1 47.83 ? C6 FMN 200 B 1 HETATM 11 C C7 FMN . . . K 3 38.125 37.985 50.249 1 57.03 ? C7 FMN 200 B 1 HETATM 12 C C7M FMN . . . K 3 39.009 36.82 49.771 1 54.75 ? C7M FMN 200 B 1 HETATM 13 C C8 FMN . . . K 3 38.037 38.335 51.795 1 57.77 ? C8 FMN 200 B 1 HETATM 14 C C8M FMN . . . K 3 38.89 37.534 52.811 1 49.2 ? C8M FMN 200 B 1 HETATM 15 C C9 FMN . . . K 3 37.088 39.527 52.289 1 70.1 ? C9 FMN 200 B 1 HETATM 16 C C9A FMN . . . K 3 36.239 40.363 51.213 1 48.86 ? C9A FMN 200 B 1 HETATM 17 N N10 FMN . . . K 3 35.331 41.497 51.674 1 60.91 ? N10 FMN 200 B 1 HETATM 18 C C10 FMN . . . K 3 34.508 42.3 50.673 1 69.7 ? C10 FMN 200 B 1 HETATM 19 C C1' FMN . . . K 3 35.254 41.869 53.089 1 70.86 ? C1' FMN 200 B 1 HETATM 20 C C2' FMN . . . K 3 36.137 43.064 53.516 1 86.85 ? C2' FMN 200 B 1 HETATM 21 O O2' FMN . . . K 3 37.309 43.066 53.319 1 96.23 ? O2' FMN 200 B 1 HETATM 22 C C3' FMN . . . K 3 35.721 43.652 54.854 1 87.82 ? C3' FMN 200 B 1 HETATM 23 O O3' FMN . . . K 3 36.293 44.933 54.94 1 91.45 ? O3' FMN 200 B 1 HETATM 24 C C4' FMN . . . K 3 36.365 42.646 55.829 1 79.22 ? C4' FMN 200 B 1 HETATM 25 O O4' FMN . . . K 3 35.652 41.426 55.837 1 69.37 ? O4' FMN 200 B 1 HETATM 26 C C5' FMN . . . K 3 36.372 43.247 57.245 1 80.16 ? C5' FMN 200 B 1 HETATM 27 O O5' FMN . . . K 3 37.341 42.507 57.942 1 73.77 ? O5' FMN 200 B 1 HETATM 28 P P FMN . . . K 3 38.083 43.223 59.218 1 68.47 ? P FMN 200 B 1 HETATM 29 O O1P FMN . . . K 3 36.943 44.081 60.063 1 87.89 ? O1P FMN 200 B 1 HETATM 30 O O2P FMN . . . K 3 39.295 44.207 58.684 1 89.88 ? O2P FMN 200 B 1 HETATM 31 O O3P FMN . . . K 3 38.669 42.178 60.026 1 64.45 ? O3P FMN 200 B 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #