data_3K6V # _model_server_result.job_id '_Cx3o89pMDQl3cmdCz-NzQ' _model_server_result.datetime_utc '2024-11-05 00:26:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k6v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 3K6V # _exptl.entry_id 3K6V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3K6V _cell.length_a 81.629 _cell.length_b 81.629 _cell.length_c 104.636 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K6V _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 3K6V _atom_sites.fract_transf_matrix[1][1] 0.012251 _atom_sites.fract_transf_matrix[1][2] 0.007073 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014146 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009557 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 501 501 CIT CIT . C 3 HOH A 1 353 1 HOH HOH . C 3 HOH A 2 354 2 HOH HOH . C 3 HOH A 3 355 3 HOH HOH . C 3 HOH A 4 356 4 HOH HOH . C 3 HOH A 5 357 5 HOH HOH . C 3 HOH A 6 358 6 HOH HOH . C 3 HOH A 7 359 7 HOH HOH . C 3 HOH A 8 360 8 HOH HOH . C 3 HOH A 9 361 9 HOH HOH . C 3 HOH A 10 362 10 HOH HOH . C 3 HOH A 11 363 11 HOH HOH . C 3 HOH A 12 364 12 HOH HOH . C 3 HOH A 13 365 13 HOH HOH . C 3 HOH A 14 366 14 HOH HOH . C 3 HOH A 15 367 15 HOH HOH . C 3 HOH A 16 368 16 HOH HOH . C 3 HOH A 17 369 17 HOH HOH . C 3 HOH A 18 370 18 HOH HOH . C 3 HOH A 19 371 19 HOH HOH . C 3 HOH A 20 372 20 HOH HOH . C 3 HOH A 21 373 21 HOH HOH . C 3 HOH A 22 374 22 HOH HOH . C 3 HOH A 23 375 23 HOH HOH . C 3 HOH A 24 376 24 HOH HOH . C 3 HOH A 25 377 25 HOH HOH . C 3 HOH A 26 378 26 HOH HOH . C 3 HOH A 27 379 27 HOH HOH . C 3 HOH A 28 380 28 HOH HOH . C 3 HOH A 29 381 29 HOH HOH . C 3 HOH A 30 382 30 HOH HOH . C 3 HOH A 31 383 31 HOH HOH . C 3 HOH A 32 384 32 HOH HOH . C 3 HOH A 33 385 33 HOH HOH . C 3 HOH A 34 386 34 HOH HOH . C 3 HOH A 35 387 35 HOH HOH . C 3 HOH A 36 388 36 HOH HOH . C 3 HOH A 37 389 37 HOH HOH . C 3 HOH A 38 390 38 HOH HOH . C 3 HOH A 39 391 39 HOH HOH . C 3 HOH A 40 392 40 HOH HOH . C 3 HOH A 41 393 41 HOH HOH . C 3 HOH A 42 394 42 HOH HOH . C 3 HOH A 43 395 43 HOH HOH . C 3 HOH A 44 396 44 HOH HOH . C 3 HOH A 45 397 45 HOH HOH . C 3 HOH A 46 398 46 HOH HOH . C 3 HOH A 47 399 47 HOH HOH . C 3 HOH A 48 400 48 HOH HOH . C 3 HOH A 49 401 49 HOH HOH . C 3 HOH A 50 402 50 HOH HOH . C 3 HOH A 51 403 51 HOH HOH . C 3 HOH A 52 404 52 HOH HOH . C 3 HOH A 53 405 53 HOH HOH . C 3 HOH A 54 406 54 HOH HOH . C 3 HOH A 55 407 55 HOH HOH . C 3 HOH A 56 408 56 HOH HOH . C 3 HOH A 57 409 57 HOH HOH . C 3 HOH A 58 410 58 HOH HOH . C 3 HOH A 59 411 59 HOH HOH . C 3 HOH A 60 412 60 HOH HOH . C 3 HOH A 61 413 61 HOH HOH . C 3 HOH A 62 414 62 HOH HOH . C 3 HOH A 63 415 63 HOH HOH . C 3 HOH A 64 416 64 HOH HOH . C 3 HOH A 65 417 65 HOH HOH . C 3 HOH A 66 418 66 HOH HOH . C 3 HOH A 67 419 67 HOH HOH . C 3 HOH A 68 420 68 HOH HOH . C 3 HOH A 69 421 69 HOH HOH . C 3 HOH A 70 422 70 HOH HOH . C 3 HOH A 71 423 71 HOH HOH . C 3 HOH A 72 424 72 HOH HOH . C 3 HOH A 73 425 73 HOH HOH . C 3 HOH A 74 426 74 HOH HOH . C 3 HOH A 75 427 75 HOH HOH . C 3 HOH A 76 428 76 HOH HOH . C 3 HOH A 77 429 77 HOH HOH . C 3 HOH A 78 430 78 HOH HOH . C 3 HOH A 79 431 79 HOH HOH . C 3 HOH A 80 432 80 HOH HOH . C 3 HOH A 81 433 81 HOH HOH . C 3 HOH A 82 434 82 HOH HOH . C 3 HOH A 83 435 83 HOH HOH . C 3 HOH A 84 436 84 HOH HOH . C 3 HOH A 85 437 85 HOH HOH . C 3 HOH A 86 438 86 HOH HOH . C 3 HOH A 87 439 87 HOH HOH . C 3 HOH A 88 440 88 HOH HOH . C 3 HOH A 89 441 89 HOH HOH . C 3 HOH A 90 442 90 HOH HOH . C 3 HOH A 91 443 91 HOH HOH . C 3 HOH A 92 444 93 HOH HOH . C 3 HOH A 93 445 94 HOH HOH . C 3 HOH A 94 446 95 HOH HOH . C 3 HOH A 95 447 96 HOH HOH . C 3 HOH A 96 448 97 HOH HOH . C 3 HOH A 97 449 98 HOH HOH . C 3 HOH A 98 450 99 HOH HOH . C 3 HOH A 99 451 100 HOH HOH . C 3 HOH A 100 452 101 HOH HOH . C 3 HOH A 101 453 102 HOH HOH . C 3 HOH A 102 454 103 HOH HOH . C 3 HOH A 103 455 104 HOH HOH . C 3 HOH A 104 456 105 HOH HOH . C 3 HOH A 105 457 106 HOH HOH . C 3 HOH A 106 458 107 HOH HOH . C 3 HOH A 107 459 108 HOH HOH . C 3 HOH A 108 460 109 HOH HOH . C 3 HOH A 109 461 110 HOH HOH . C 3 HOH A 110 462 111 HOH HOH . C 3 HOH A 111 463 112 HOH HOH . C 3 HOH A 112 464 113 HOH HOH . C 3 HOH A 113 465 114 HOH HOH . C 3 HOH A 114 466 115 HOH HOH . C 3 HOH A 115 467 116 HOH HOH . C 3 HOH A 116 468 117 HOH HOH . C 3 HOH A 117 469 118 HOH HOH . C 3 HOH A 118 470 119 HOH HOH . C 3 HOH A 119 471 120 HOH HOH . C 3 HOH A 120 472 121 HOH HOH . C 3 HOH A 121 473 122 HOH HOH . C 3 HOH A 122 474 123 HOH HOH . C 3 HOH A 123 475 124 HOH HOH . C 3 HOH A 124 476 125 HOH HOH . C 3 HOH A 125 477 126 HOH HOH . C 3 HOH A 126 478 127 HOH HOH . C 3 HOH A 127 479 128 HOH HOH . C 3 HOH A 128 480 129 HOH HOH . C 3 HOH A 129 481 130 HOH HOH . C 3 HOH A 130 482 131 HOH HOH . C 3 HOH A 131 483 132 HOH HOH . C 3 HOH A 132 484 133 HOH HOH . C 3 HOH A 133 485 134 HOH HOH . C 3 HOH A 134 486 135 HOH HOH . C 3 HOH A 135 487 136 HOH HOH . C 3 HOH A 136 488 137 HOH HOH . C 3 HOH A 137 489 138 HOH HOH . C 3 HOH A 138 490 139 HOH HOH . C 3 HOH A 139 491 140 HOH HOH . C 3 HOH A 140 492 141 HOH HOH . C 3 HOH A 141 493 142 HOH HOH . C 3 HOH A 142 494 143 HOH HOH . C 3 HOH A 143 495 144 HOH HOH . C 3 HOH A 144 496 145 HOH HOH . C 3 HOH A 145 497 146 HOH HOH . C 3 HOH A 146 498 147 HOH HOH . C 3 HOH A 147 499 148 HOH HOH . C 3 HOH A 148 500 149 HOH HOH . C 3 HOH A 149 502 150 HOH HOH . C 3 HOH A 150 503 151 HOH HOH . C 3 HOH A 151 504 152 HOH HOH . C 3 HOH A 152 505 153 HOH HOH . C 3 HOH A 153 506 154 HOH HOH . C 3 HOH A 154 507 155 HOH HOH . C 3 HOH A 155 508 156 HOH HOH . C 3 HOH A 156 509 157 HOH HOH . C 3 HOH A 157 510 158 HOH HOH . C 3 HOH A 158 511 159 HOH HOH . C 3 HOH A 159 512 160 HOH HOH . C 3 HOH A 160 513 161 HOH HOH . C 3 HOH A 161 514 162 HOH HOH . C 3 HOH A 162 515 163 HOH HOH . C 3 HOH A 163 516 164 HOH HOH . C 3 HOH A 164 517 165 HOH HOH . C 3 HOH A 165 518 166 HOH HOH . C 3 HOH A 166 519 167 HOH HOH . C 3 HOH A 167 520 168 HOH HOH . C 3 HOH A 168 521 169 HOH HOH . C 3 HOH A 169 522 170 HOH HOH . C 3 HOH A 170 523 171 HOH HOH . C 3 HOH A 171 524 172 HOH HOH . C 3 HOH A 172 525 173 HOH HOH . C 3 HOH A 173 526 174 HOH HOH . C 3 HOH A 174 527 175 HOH HOH . C 3 HOH A 175 528 176 HOH HOH . C 3 HOH A 176 529 177 HOH HOH . C 3 HOH A 177 530 178 HOH HOH . C 3 HOH A 178 531 179 HOH HOH . C 3 HOH A 179 532 180 HOH HOH . C 3 HOH A 180 533 181 HOH HOH . C 3 HOH A 181 534 182 HOH HOH . C 3 HOH A 182 535 183 HOH HOH . C 3 HOH A 183 536 184 HOH HOH . C 3 HOH A 184 537 185 HOH HOH . C 3 HOH A 185 538 186 HOH HOH . C 3 HOH A 186 539 187 HOH HOH . C 3 HOH A 187 540 188 HOH HOH . C 3 HOH A 188 541 189 HOH HOH . C 3 HOH A 189 542 190 HOH HOH . C 3 HOH A 190 543 191 HOH HOH . C 3 HOH A 191 544 192 HOH HOH . C 3 HOH A 192 545 193 HOH HOH . C 3 HOH A 193 546 194 HOH HOH . C 3 HOH A 194 547 195 HOH HOH . C 3 HOH A 195 548 196 HOH HOH . C 3 HOH A 196 549 197 HOH HOH . C 3 HOH A 197 550 198 HOH HOH . C 3 HOH A 198 551 199 HOH HOH . C 3 HOH A 199 552 200 HOH HOH . C 3 HOH A 200 553 201 HOH HOH . C 3 HOH A 201 554 202 HOH HOH . C 3 HOH A 202 555 203 HOH HOH . C 3 HOH A 203 556 204 HOH HOH . C 3 HOH A 204 557 205 HOH HOH . C 3 HOH A 205 558 206 HOH HOH . C 3 HOH A 206 559 207 HOH HOH . C 3 HOH A 207 560 208 HOH HOH . C 3 HOH A 208 561 209 HOH HOH . C 3 HOH A 209 562 210 HOH HOH . C 3 HOH A 210 563 211 HOH HOH . C 3 HOH A 211 564 212 HOH HOH . C 3 HOH A 212 565 213 HOH HOH . C 3 HOH A 213 566 214 HOH HOH . C 3 HOH A 214 567 215 HOH HOH . C 3 HOH A 215 568 216 HOH HOH . C 3 HOH A 216 569 217 HOH HOH . C 3 HOH A 217 570 218 HOH HOH . C 3 HOH A 218 571 219 HOH HOH . C 3 HOH A 219 572 220 HOH HOH . C 3 HOH A 220 573 221 HOH HOH . C 3 HOH A 221 574 222 HOH HOH . C 3 HOH A 222 575 223 HOH HOH . C 3 HOH A 223 576 224 HOH HOH . C 3 HOH A 224 577 225 HOH HOH . C 3 HOH A 225 578 226 HOH HOH . C 3 HOH A 226 579 227 HOH HOH . C 3 HOH A 227 580 228 HOH HOH . C 3 HOH A 228 581 229 HOH HOH . C 3 HOH A 229 582 230 HOH HOH . C 3 HOH A 230 583 231 HOH HOH . C 3 HOH A 231 584 232 HOH HOH . C 3 HOH A 232 585 233 HOH HOH . C 3 HOH A 233 586 234 HOH HOH . C 3 HOH A 234 587 235 HOH HOH . C 3 HOH A 235 588 236 HOH HOH . C 3 HOH A 236 589 237 HOH HOH . C 3 HOH A 237 590 238 HOH HOH . C 3 HOH A 238 591 239 HOH HOH . C 3 HOH A 239 592 240 HOH HOH . C 3 HOH A 240 593 241 HOH HOH . C 3 HOH A 241 594 242 HOH HOH . C 3 HOH A 242 595 243 HOH HOH . C 3 HOH A 243 596 244 HOH HOH . C 3 HOH A 244 597 245 HOH HOH . C 3 HOH A 245 598 246 HOH HOH . C 3 HOH A 246 599 247 HOH HOH . C 3 HOH A 247 600 248 HOH HOH . C 3 HOH A 248 601 249 HOH HOH . C 3 HOH A 249 602 250 HOH HOH . C 3 HOH A 250 603 251 HOH HOH . C 3 HOH A 251 604 252 HOH HOH . C 3 HOH A 252 605 253 HOH HOH . C 3 HOH A 253 606 254 HOH HOH . C 3 HOH A 254 607 255 HOH HOH . C 3 HOH A 255 608 256 HOH HOH . C 3 HOH A 256 609 257 HOH HOH . C 3 HOH A 257 610 258 HOH HOH . C 3 HOH A 258 611 259 HOH HOH . C 3 HOH A 259 612 260 HOH HOH . C 3 HOH A 260 613 261 HOH HOH . C 3 HOH A 261 614 262 HOH HOH . C 3 HOH A 262 615 263 HOH HOH . C 3 HOH A 263 616 264 HOH HOH . C 3 HOH A 264 617 265 HOH HOH . C 3 HOH A 265 618 266 HOH HOH . C 3 HOH A 266 619 267 HOH HOH . C 3 HOH A 267 620 268 HOH HOH . C 3 HOH A 268 621 269 HOH HOH . C 3 HOH A 269 622 270 HOH HOH . C 3 HOH A 270 623 271 HOH HOH . C 3 HOH A 271 624 272 HOH HOH . C 3 HOH A 272 625 273 HOH HOH . C 3 HOH A 273 626 274 HOH HOH . C 3 HOH A 274 627 275 HOH HOH . C 3 HOH A 275 628 276 HOH HOH . C 3 HOH A 276 629 277 HOH HOH . C 3 HOH A 277 630 278 HOH HOH . C 3 HOH A 278 631 279 HOH HOH . C 3 HOH A 279 632 280 HOH HOH . C 3 HOH A 280 633 281 HOH HOH . C 3 HOH A 281 634 282 HOH HOH . C 3 HOH A 282 635 283 HOH HOH . C 3 HOH A 283 636 284 HOH HOH . C 3 HOH A 284 637 285 HOH HOH . C 3 HOH A 285 638 286 HOH HOH . C 3 HOH A 286 639 287 HOH HOH . C 3 HOH A 287 640 288 HOH HOH . C 3 HOH A 288 641 289 HOH HOH . C 3 HOH A 289 642 290 HOH HOH . C 3 HOH A 290 643 291 HOH HOH . C 3 HOH A 291 644 292 HOH HOH . C 3 HOH A 292 645 293 HOH HOH . C 3 HOH A 293 646 294 HOH HOH . C 3 HOH A 294 647 295 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . B 2 33.585 49.117 11.697 1 37.51 ? C1 CIT 501 A 1 HETATM 2 O O1 CIT . . . B 2 33.258 49.014 10.499 1 37.66 ? O1 CIT 501 A 1 HETATM 3 O O2 CIT . . . B 2 33.915 50.24 12.128 1 38 ? O2 CIT 501 A 1 HETATM 4 C C2 CIT . . . B 2 33.586 47.908 12.607 1 37.17 ? C2 CIT 501 A 1 HETATM 5 C C3 CIT . . . B 2 34.389 46.763 11.991 1 36.87 ? C3 CIT 501 A 1 HETATM 6 O O7 CIT . . . B 2 35.663 47.253 11.497 1 37.58 ? O7 CIT 501 A 1 HETATM 7 C C4 CIT . . . B 2 34.524 45.81 13.266 0 20 ? C4 CIT 501 A 1 HETATM 8 C C5 CIT . . . B 2 33.228 45.578 13.984 0 20 ? C5 CIT 501 A 1 HETATM 9 O O3 CIT . . . B 2 33.31 45.133 15.241 0 20 ? O3 CIT 501 A 1 HETATM 10 O O4 CIT . . . B 2 32.214 45.98 13.446 0 20 ? O4 CIT 501 A 1 HETATM 11 C C6 CIT . . . B 2 33.638 46.121 10.834 1 36.41 ? C6 CIT 501 A 1 HETATM 12 O O5 CIT . . . B 2 32.405 45.923 10.881 1 35.83 ? O5 CIT 501 A 1 HETATM 13 O O6 CIT . . . B 2 34.263 45.786 9.808 1 36.08 ? O6 CIT 501 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #