data_3K7K # _model_server_result.job_id axY5Dzpm-7zrvVagZ0bXsQ _model_server_result.datetime_utc '2024-11-09 02:25:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k7k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 3K7K # _exptl.entry_id 3K7K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 110.222 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'carbonotrithioic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 104.45 _cell.angle_gamma 90 _cell.entry_id 3K7K _cell.length_a 42.07 _cell.length_b 41.41 _cell.length_c 72.23 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K7K _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc4 A O GLN 136 A GLN 137 1_555 C HG HG . A HG 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.857 ? metalc ? metalc5 B ZN ZN . A ZN 262 1_555 D SAD KCS . A KCS 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc6 C HG HG . A HG 263 1_555 E O HOH . A HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? # _chem_comp.formula 'C H2 S3' _chem_comp.formula_weight 110.222 _chem_comp.id KCS _chem_comp.mon_nstd_flag . _chem_comp.name 'carbonotrithioic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Trithiocarbonic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAB SAA KCS sing 173 n n SAA HSAA KCS sing 174 n n SAC CAB KCS doub 175 n n SAD CAB KCS sing 176 n n SAD HSAD KCS sing 177 n n # _atom_sites.entry_id 3K7K _atom_sites.fract_transf_matrix[1][1] 0.02377 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006125 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024149 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014297 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 262 262 ZN ZN . C 3 HG A 1 263 263 HG HG . D 4 KCS A 1 301 301 KCS KCS . E 5 HOH A 1 126 126 HOH HOH . E 5 HOH A 2 264 1 HOH HOH . E 5 HOH A 3 265 2 HOH HOH . E 5 HOH A 4 266 4 HOH HOH . E 5 HOH A 5 267 5 HOH HOH . E 5 HOH A 6 268 6 HOH HOH . E 5 HOH A 7 269 8 HOH HOH . E 5 HOH A 8 270 9 HOH HOH . E 5 HOH A 9 271 10 HOH HOH . E 5 HOH A 10 272 11 HOH HOH . E 5 HOH A 11 273 12 HOH HOH . E 5 HOH A 12 274 13 HOH HOH . E 5 HOH A 13 275 14 HOH HOH . E 5 HOH A 14 276 15 HOH HOH . E 5 HOH A 15 277 16 HOH HOH . E 5 HOH A 16 278 17 HOH HOH . E 5 HOH A 17 279 18 HOH HOH . E 5 HOH A 18 280 19 HOH HOH . E 5 HOH A 19 281 20 HOH HOH . E 5 HOH A 20 282 21 HOH HOH . E 5 HOH A 21 283 22 HOH HOH . E 5 HOH A 22 284 23 HOH HOH . E 5 HOH A 23 285 24 HOH HOH . E 5 HOH A 24 286 25 HOH HOH . E 5 HOH A 25 287 26 HOH HOH . E 5 HOH A 26 288 27 HOH HOH . E 5 HOH A 27 289 28 HOH HOH . E 5 HOH A 28 290 29 HOH HOH . E 5 HOH A 29 291 30 HOH HOH . E 5 HOH A 30 292 31 HOH HOH . E 5 HOH A 31 293 32 HOH HOH . E 5 HOH A 32 294 33 HOH HOH . E 5 HOH A 33 295 34 HOH HOH . E 5 HOH A 34 296 35 HOH HOH . E 5 HOH A 35 297 36 HOH HOH . E 5 HOH A 36 298 37 HOH HOH . E 5 HOH A 37 299 38 HOH HOH . E 5 HOH A 38 300 39 HOH HOH . E 5 HOH A 39 302 40 HOH HOH . E 5 HOH A 40 303 41 HOH HOH . E 5 HOH A 41 304 42 HOH HOH . E 5 HOH A 42 305 43 HOH HOH . E 5 HOH A 43 306 44 HOH HOH . E 5 HOH A 44 307 45 HOH HOH . E 5 HOH A 45 308 46 HOH HOH . E 5 HOH A 46 309 47 HOH HOH . E 5 HOH A 47 310 48 HOH HOH . E 5 HOH A 48 311 49 HOH HOH . E 5 HOH A 49 312 50 HOH HOH . E 5 HOH A 50 313 51 HOH HOH . E 5 HOH A 51 314 52 HOH HOH . E 5 HOH A 52 315 53 HOH HOH . E 5 HOH A 53 316 54 HOH HOH . E 5 HOH A 54 317 55 HOH HOH . E 5 HOH A 55 318 56 HOH HOH . E 5 HOH A 56 319 57 HOH HOH . E 5 HOH A 57 320 58 HOH HOH . E 5 HOH A 58 321 59 HOH HOH . E 5 HOH A 59 322 60 HOH HOH . E 5 HOH A 60 323 61 HOH HOH . E 5 HOH A 61 324 62 HOH HOH . E 5 HOH A 62 325 64 HOH HOH . E 5 HOH A 63 326 65 HOH HOH . E 5 HOH A 64 327 66 HOH HOH . E 5 HOH A 65 328 67 HOH HOH . E 5 HOH A 66 329 68 HOH HOH . E 5 HOH A 67 330 69 HOH HOH . E 5 HOH A 68 331 70 HOH HOH . E 5 HOH A 69 332 71 HOH HOH . E 5 HOH A 70 333 72 HOH HOH . E 5 HOH A 71 334 73 HOH HOH . E 5 HOH A 72 335 74 HOH HOH . E 5 HOH A 73 336 76 HOH HOH . E 5 HOH A 74 337 78 HOH HOH . E 5 HOH A 75 338 79 HOH HOH . E 5 HOH A 76 339 80 HOH HOH . E 5 HOH A 77 340 81 HOH HOH . E 5 HOH A 78 341 82 HOH HOH . E 5 HOH A 79 342 83 HOH HOH . E 5 HOH A 80 343 84 HOH HOH . E 5 HOH A 81 344 85 HOH HOH . E 5 HOH A 82 345 86 HOH HOH . E 5 HOH A 83 346 87 HOH HOH . E 5 HOH A 84 347 88 HOH HOH . E 5 HOH A 85 348 89 HOH HOH . E 5 HOH A 86 349 90 HOH HOH . E 5 HOH A 87 350 91 HOH HOH . E 5 HOH A 88 351 92 HOH HOH . E 5 HOH A 89 352 94 HOH HOH . E 5 HOH A 90 353 95 HOH HOH . E 5 HOH A 91 354 96 HOH HOH . E 5 HOH A 92 355 97 HOH HOH . E 5 HOH A 93 356 98 HOH HOH . E 5 HOH A 94 357 99 HOH HOH . E 5 HOH A 95 358 100 HOH HOH . E 5 HOH A 96 359 101 HOH HOH . E 5 HOH A 97 360 102 HOH HOH . E 5 HOH A 98 361 103 HOH HOH . E 5 HOH A 99 362 104 HOH HOH . E 5 HOH A 100 363 105 HOH HOH . E 5 HOH A 101 364 107 HOH HOH . E 5 HOH A 102 365 108 HOH HOH . E 5 HOH A 103 366 111 HOH HOH . E 5 HOH A 104 367 112 HOH HOH . E 5 HOH A 105 368 113 HOH HOH . E 5 HOH A 106 369 115 HOH HOH . E 5 HOH A 107 370 116 HOH HOH . E 5 HOH A 108 371 117 HOH HOH . E 5 HOH A 109 372 118 HOH HOH . E 5 HOH A 110 373 120 HOH HOH . E 5 HOH A 111 374 121 HOH HOH . E 5 HOH A 112 375 122 HOH HOH . E 5 HOH A 113 376 124 HOH HOH . E 5 HOH A 114 377 125 HOH HOH . E 5 HOH A 115 378 128 HOH HOH . E 5 HOH A 116 379 130 HOH HOH . E 5 HOH A 117 380 131 HOH HOH . E 5 HOH A 118 381 132 HOH HOH . E 5 HOH A 119 382 133 HOH HOH . E 5 HOH A 120 383 134 HOH HOH . E 5 HOH A 121 384 136 HOH HOH . E 5 HOH A 122 385 137 HOH HOH . E 5 HOH A 123 386 138 HOH HOH . E 5 HOH A 124 387 139 HOH HOH . E 5 HOH A 125 388 141 HOH HOH . E 5 HOH A 126 389 144 HOH HOH . E 5 HOH A 127 390 145 HOH HOH . E 5 HOH A 128 391 146 HOH HOH . E 5 HOH A 129 392 147 HOH HOH . E 5 HOH A 130 393 148 HOH HOH . E 5 HOH A 131 394 149 HOH HOH . E 5 HOH A 132 395 150 HOH HOH . E 5 HOH A 133 396 153 HOH HOH . E 5 HOH A 134 397 154 HOH HOH . E 5 HOH A 135 398 155 HOH HOH . E 5 HOH A 136 399 158 HOH HOH . E 5 HOH A 137 400 160 HOH HOH . E 5 HOH A 138 401 161 HOH HOH . E 5 HOH A 139 402 162 HOH HOH . E 5 HOH A 140 403 163 HOH HOH . E 5 HOH A 141 404 164 HOH HOH . E 5 HOH A 142 405 165 HOH HOH . E 5 HOH A 143 406 166 HOH HOH . E 5 HOH A 144 407 167 HOH HOH . E 5 HOH A 145 408 169 HOH HOH . E 5 HOH A 146 409 170 HOH HOH . E 5 HOH A 147 410 171 HOH HOH . E 5 HOH A 148 411 172 HOH HOH . E 5 HOH A 149 412 173 HOH HOH . E 5 HOH A 150 413 174 HOH HOH . E 5 HOH A 151 414 175 HOH HOH . E 5 HOH A 152 415 177 HOH HOH . E 5 HOH A 153 416 178 HOH HOH . E 5 HOH A 154 417 179 HOH HOH . E 5 HOH A 155 418 180 HOH HOH . E 5 HOH A 156 419 182 HOH HOH . E 5 HOH A 157 420 183 HOH HOH . E 5 HOH A 158 421 184 HOH HOH . E 5 HOH A 159 422 185 HOH HOH . E 5 HOH A 160 423 186 HOH HOH . E 5 HOH A 161 424 187 HOH HOH . E 5 HOH A 162 425 188 HOH HOH . E 5 HOH A 163 426 191 HOH HOH . E 5 HOH A 164 427 192 HOH HOH . E 5 HOH A 165 428 193 HOH HOH . E 5 HOH A 166 429 194 HOH HOH . E 5 HOH A 167 430 195 HOH HOH . E 5 HOH A 168 431 196 HOH HOH . E 5 HOH A 169 432 197 HOH HOH . E 5 HOH A 170 433 198 HOH HOH . E 5 HOH A 171 434 199 HOH HOH . E 5 HOH A 172 435 200 HOH HOH . E 5 HOH A 173 436 201 HOH HOH . E 5 HOH A 174 437 202 HOH HOH . E 5 HOH A 175 438 205 HOH HOH . E 5 HOH A 176 439 206 HOH HOH . E 5 HOH A 177 440 207 HOH HOH . E 5 HOH A 178 441 208 HOH HOH . E 5 HOH A 179 442 209 HOH HOH . E 5 HOH A 180 443 210 HOH HOH . E 5 HOH A 181 444 212 HOH HOH . E 5 HOH A 182 445 213 HOH HOH . E 5 HOH A 183 446 214 HOH HOH . E 5 HOH A 184 447 215 HOH HOH . E 5 HOH A 185 448 216 HOH HOH . E 5 HOH A 186 449 219 HOH HOH . E 5 HOH A 187 450 221 HOH HOH . E 5 HOH A 188 451 222 HOH HOH . E 5 HOH A 189 452 223 HOH HOH . E 5 HOH A 190 453 224 HOH HOH . E 5 HOH A 191 454 226 HOH HOH . E 5 HOH A 192 455 228 HOH HOH . E 5 HOH A 193 456 232 HOH HOH . E 5 HOH A 194 457 234 HOH HOH . E 5 HOH A 195 458 235 HOH HOH . E 5 HOH A 196 459 237 HOH HOH . E 5 HOH A 197 460 240 HOH HOH . E 5 HOH A 198 461 241 HOH HOH . E 5 HOH A 199 462 242 HOH HOH . E 5 HOH A 200 463 246 HOH HOH . E 5 HOH A 201 464 247 HOH HOH . E 5 HOH A 202 465 252 HOH HOH . E 5 HOH A 203 466 255 HOH HOH . E 5 HOH A 204 467 256 HOH HOH . E 5 HOH A 205 468 257 HOH HOH . E 5 HOH A 206 469 258 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S SAA KCS . . . D 4 -5.846 1.428 18.674 1 56.7 ? SAA KCS 301 A 1 HETATM 2 C CAB KCS . . . D 4 -6.246 1.053 17.215 1 55.77 ? CAB KCS 301 A 1 HETATM 3 S SAC KCS . . . D 4 -7.296 1.94 16.476 1 57.23 ? SAC KCS 301 A 1 HETATM 4 S SAD KCS . . . D 4 -5.606 -0.186 16.511 1 53.6 ? SAD KCS 301 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #