data_3K7P # _model_server_result.job_id rZudw9U6PzmyuqaltFIg1A _model_server_result.datetime_utc '2024-12-01 22:24:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k7p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":160}' # _entry.id 3K7P # _exptl.entry_id 3K7P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3K7P _cell.length_a 93.079 _cell.length_b 93.079 _cell.length_c 93.827 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K7P _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3K7P _atom_sites.fract_transf_matrix[1][1] 0.010744 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010658 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 160 2 PO4 PO4 . D 2 PO4 B 1 160 1 PO4 PO4 . E 3 HOH A 1 161 1 HOH HOH . E 3 HOH A 2 162 2 HOH HOH . E 3 HOH A 3 163 4 HOH HOH . E 3 HOH A 4 164 5 HOH HOH . E 3 HOH A 5 165 7 HOH HOH . E 3 HOH A 6 166 9 HOH HOH . E 3 HOH A 7 167 10 HOH HOH . E 3 HOH A 8 168 11 HOH HOH . E 3 HOH A 9 169 15 HOH HOH . E 3 HOH A 10 170 16 HOH HOH . E 3 HOH A 11 171 19 HOH HOH . E 3 HOH A 12 172 20 HOH HOH . E 3 HOH A 13 173 21 HOH HOH . E 3 HOH A 14 174 25 HOH HOH . E 3 HOH A 15 175 28 HOH HOH . E 3 HOH A 16 176 29 HOH HOH . E 3 HOH A 17 177 30 HOH HOH . E 3 HOH A 18 178 31 HOH HOH . E 3 HOH A 19 179 33 HOH HOH . E 3 HOH A 20 180 34 HOH HOH . E 3 HOH A 21 181 35 HOH HOH . E 3 HOH A 22 182 36 HOH HOH . E 3 HOH A 23 183 37 HOH HOH . E 3 HOH A 24 184 38 HOH HOH . E 3 HOH A 25 185 39 HOH HOH . E 3 HOH A 26 186 40 HOH HOH . E 3 HOH A 27 187 41 HOH HOH . E 3 HOH A 28 188 42 HOH HOH . E 3 HOH A 29 189 43 HOH HOH . E 3 HOH A 30 190 44 HOH HOH . E 3 HOH A 31 191 45 HOH HOH . E 3 HOH A 32 192 46 HOH HOH . E 3 HOH A 33 193 47 HOH HOH . E 3 HOH A 34 194 49 HOH HOH . E 3 HOH A 35 195 50 HOH HOH . E 3 HOH A 36 196 52 HOH HOH . E 3 HOH A 37 197 53 HOH HOH . E 3 HOH A 38 198 54 HOH HOH . E 3 HOH A 39 199 55 HOH HOH . E 3 HOH A 40 200 56 HOH HOH . E 3 HOH A 41 201 58 HOH HOH . E 3 HOH A 42 202 57 HOH HOH . E 3 HOH A 43 203 60 HOH HOH . E 3 HOH A 44 204 61 HOH HOH . E 3 HOH A 45 205 63 HOH HOH . E 3 HOH A 46 206 65 HOH HOH . E 3 HOH A 47 207 66 HOH HOH . E 3 HOH A 48 208 67 HOH HOH . E 3 HOH A 49 209 28 HOH HOH . E 3 HOH A 50 210 70 HOH HOH . E 3 HOH A 51 211 71 HOH HOH . E 3 HOH A 52 212 72 HOH HOH . E 3 HOH A 53 213 73 HOH HOH . E 3 HOH A 54 214 74 HOH HOH . E 3 HOH A 55 215 75 HOH HOH . E 3 HOH A 56 216 76 HOH HOH . E 3 HOH A 57 217 77 HOH HOH . E 3 HOH A 58 218 78 HOH HOH . E 3 HOH A 59 219 79 HOH HOH . E 3 HOH A 60 220 80 HOH HOH . E 3 HOH A 61 221 81 HOH HOH . E 3 HOH A 62 222 82 HOH HOH . E 3 HOH A 63 223 83 HOH HOH . E 3 HOH A 64 224 84 HOH HOH . E 3 HOH A 65 225 86 HOH HOH . E 3 HOH A 66 226 87 HOH HOH . E 3 HOH A 67 227 88 HOH HOH . E 3 HOH A 68 228 89 HOH HOH . E 3 HOH A 69 229 2 HOH HOH . E 3 HOH A 70 230 3 HOH HOH . E 3 HOH A 71 231 9 HOH HOH . E 3 HOH A 72 232 10 HOH HOH . E 3 HOH A 73 233 12 HOH HOH . E 3 HOH A 74 234 13 HOH HOH . E 3 HOH A 75 235 18 HOH HOH . E 3 HOH A 76 236 19 HOH HOH . E 3 HOH A 77 237 22 HOH HOH . E 3 HOH A 78 238 24 HOH HOH . E 3 HOH A 79 239 30 HOH HOH . E 3 HOH A 80 240 31 HOH HOH . E 3 HOH A 81 241 33 HOH HOH . E 3 HOH A 82 242 35 HOH HOH . E 3 HOH A 83 243 37 HOH HOH . E 3 HOH A 84 244 39 HOH HOH . E 3 HOH A 85 245 43 HOH HOH . E 3 HOH A 86 246 44 HOH HOH . E 3 HOH A 87 247 46 HOH HOH . E 3 HOH A 88 248 47 HOH HOH . E 3 HOH A 89 249 52 HOH HOH . E 3 HOH A 90 250 53 HOH HOH . E 3 HOH A 91 251 67 HOH HOH . E 3 HOH A 92 252 79 HOH HOH . E 3 HOH A 93 253 88 HOH HOH . E 3 HOH A 94 254 69 HOH HOH . F 3 HOH B 1 161 3 HOH HOH . F 3 HOH B 2 162 6 HOH HOH . F 3 HOH B 3 163 8 HOH HOH . F 3 HOH B 4 164 12 HOH HOH . F 3 HOH B 5 165 13 HOH HOH . F 3 HOH B 6 166 14 HOH HOH . F 3 HOH B 7 167 17 HOH HOH . F 3 HOH B 8 168 18 HOH HOH . F 3 HOH B 9 169 22 HOH HOH . F 3 HOH B 10 170 23 HOH HOH . F 3 HOH B 11 171 24 HOH HOH . F 3 HOH B 12 172 26 HOH HOH . F 3 HOH B 13 173 27 HOH HOH . F 3 HOH B 14 174 32 HOH HOH . F 3 HOH B 15 175 48 HOH HOH . F 3 HOH B 16 176 51 HOH HOH . F 3 HOH B 17 178 62 HOH HOH . F 3 HOH B 18 179 64 HOH HOH . F 3 HOH B 19 180 68 HOH HOH . F 3 HOH B 20 181 85 HOH HOH . F 3 HOH B 21 182 1 HOH HOH . F 3 HOH B 22 183 4 HOH HOH . F 3 HOH B 23 184 5 HOH HOH . F 3 HOH B 24 185 6 HOH HOH . F 3 HOH B 25 186 7 HOH HOH . F 3 HOH B 26 187 8 HOH HOH . F 3 HOH B 27 188 11 HOH HOH . F 3 HOH B 28 189 14 HOH HOH . F 3 HOH B 29 190 15 HOH HOH . F 3 HOH B 30 191 16 HOH HOH . F 3 HOH B 31 192 17 HOH HOH . F 3 HOH B 32 193 20 HOH HOH . F 3 HOH B 33 194 21 HOH HOH . F 3 HOH B 34 195 23 HOH HOH . F 3 HOH B 35 196 25 HOH HOH . F 3 HOH B 36 197 26 HOH HOH . F 3 HOH B 37 198 27 HOH HOH . F 3 HOH B 38 200 29 HOH HOH . F 3 HOH B 39 201 32 HOH HOH . F 3 HOH B 40 202 59 HOH HOH . F 3 HOH B 41 203 36 HOH HOH . F 3 HOH B 42 204 38 HOH HOH . F 3 HOH B 43 205 40 HOH HOH . F 3 HOH B 44 206 41 HOH HOH . F 3 HOH B 45 207 42 HOH HOH . F 3 HOH B 46 208 45 HOH HOH . F 3 HOH B 47 209 69 HOH HOH . F 3 HOH B 48 210 49 HOH HOH . F 3 HOH B 49 211 50 HOH HOH . F 3 HOH B 50 212 51 HOH HOH . F 3 HOH B 51 213 54 HOH HOH . F 3 HOH B 52 214 55 HOH HOH . F 3 HOH B 53 215 56 HOH HOH . F 3 HOH B 54 216 57 HOH HOH . F 3 HOH B 55 217 58 HOH HOH . F 3 HOH B 56 218 59 HOH HOH . F 3 HOH B 57 219 60 HOH HOH . F 3 HOH B 58 220 61 HOH HOH . F 3 HOH B 59 221 62 HOH HOH . F 3 HOH B 60 222 63 HOH HOH . F 3 HOH B 61 223 64 HOH HOH . F 3 HOH B 62 224 65 HOH HOH . F 3 HOH B 63 225 66 HOH HOH . F 3 HOH B 64 226 68 HOH HOH . F 3 HOH B 65 227 34 HOH HOH . F 3 HOH B 66 228 70 HOH HOH . F 3 HOH B 67 229 71 HOH HOH . F 3 HOH B 68 230 72 HOH HOH . F 3 HOH B 69 231 73 HOH HOH . F 3 HOH B 70 232 74 HOH HOH . F 3 HOH B 71 233 75 HOH HOH . F 3 HOH B 72 234 76 HOH HOH . F 3 HOH B 73 235 77 HOH HOH . F 3 HOH B 74 236 78 HOH HOH . F 3 HOH B 75 237 80 HOH HOH . F 3 HOH B 76 238 81 HOH HOH . F 3 HOH B 77 239 82 HOH HOH . F 3 HOH B 78 240 83 HOH HOH . F 3 HOH B 79 241 84 HOH HOH . F 3 HOH B 80 242 85 HOH HOH . F 3 HOH B 81 243 86 HOH HOH . F 3 HOH B 82 244 87 HOH HOH . F 3 HOH B 83 245 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 42.992 29.496 12.488 0.5 22.88 ? P PO4 160 B 1 HETATM 2 O O1 PO4 . . . D 2 43.458 29.716 13.907 0.5 22.66 ? O1 PO4 160 B 1 HETATM 3 O O2 PO4 . . . D 2 41.573 28.978 12.512 0.5 23.03 ? O2 PO4 160 B 1 HETATM 4 O O3 PO4 . . . D 2 43.877 28.48 11.808 0.5 22.9 ? O3 PO4 160 B 1 HETATM 5 O O4 PO4 . . . D 2 43.043 30.804 11.735 0.5 22.93 ? O4 PO4 160 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #