data_3K8C # _model_server_result.job_id gAxPj4Le-KnkLNHRIAKrgw _model_server_result.datetime_utc '2024-10-18 04:24:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k8c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":160}' # _entry.id 3K8C # _exptl.entry_id 3K8C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 231.098 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-PHOSPHO-D-ERYTHRONOHYDROXAMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3K8C _cell.length_a 92.387 _cell.length_b 92.387 _cell.length_c 94.007 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K8C _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C4 H10 N O8 P' _chem_comp.formula_weight 231.098 _chem_comp.id RES _chem_comp.mon_nstd_flag . _chem_comp.name '4-PHOSPHO-D-ERYTHRONOHYDROXAMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O7 P RES doub 277 n n P O5 RES sing 278 n n P O6 RES sing 279 n n P O4 RES sing 280 n n O5 H5 RES sing 281 n n O6 H6 RES sing 282 n n O4 C4 RES sing 283 n n C4 C3 RES sing 284 n n C4 H4C1 RES sing 285 n n C4 H4C2 RES sing 286 n n C3 O3 RES sing 287 n n C3 C2 RES sing 288 n n C3 H3 RES sing 289 n n O3 HA RES sing 290 n n C2 O2 RES sing 291 n n C2 C1 RES sing 292 n n C2 H2 RES sing 293 n n O2 HB RES sing 294 n n C1 O1 RES doub 295 n n C1 N RES sing 296 n n N ON RES sing 297 n n N H RES sing 298 n n ON HN RES sing 299 n n # _atom_sites.entry_id 3K8C _atom_sites.fract_transf_matrix[1][1] 0.010824 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010638 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 RES A 1 160 154 RES RES . D 2 RES B 1 160 153 RES RES . E 3 HOH A 1 161 3 HOH HOH . E 3 HOH A 2 162 6 HOH HOH . E 3 HOH A 3 163 7 HOH HOH . E 3 HOH A 4 164 8 HOH HOH . E 3 HOH A 5 165 11 HOH HOH . E 3 HOH A 6 166 12 HOH HOH . E 3 HOH A 7 167 13 HOH HOH . E 3 HOH A 8 168 16 HOH HOH . E 3 HOH A 9 169 18 HOH HOH . E 3 HOH A 10 170 19 HOH HOH . E 3 HOH A 11 171 21 HOH HOH . E 3 HOH A 12 172 23 HOH HOH . E 3 HOH A 13 173 24 HOH HOH . E 3 HOH A 14 174 25 HOH HOH . E 3 HOH A 15 175 28 HOH HOH . E 3 HOH A 16 176 32 HOH HOH . E 3 HOH A 17 177 34 HOH HOH . E 3 HOH A 18 178 38 HOH HOH . E 3 HOH A 19 179 39 HOH HOH . E 3 HOH A 20 180 40 HOH HOH . E 3 HOH A 21 181 41 HOH HOH . E 3 HOH A 22 182 44 HOH HOH . E 3 HOH A 23 183 45 HOH HOH . E 3 HOH A 24 184 47 HOH HOH . E 3 HOH A 25 185 53 HOH HOH . E 3 HOH A 26 186 55 HOH HOH . E 3 HOH A 27 187 58 HOH HOH . E 3 HOH A 28 188 61 HOH HOH . E 3 HOH A 29 189 63 HOH HOH . E 3 HOH A 30 190 64 HOH HOH . E 3 HOH A 31 191 65 HOH HOH . E 3 HOH A 32 192 67 HOH HOH . E 3 HOH A 33 193 68 HOH HOH . E 3 HOH A 34 194 72 HOH HOH . E 3 HOH A 35 195 74 HOH HOH . E 3 HOH A 36 197 79 HOH HOH . E 3 HOH A 37 198 80 HOH HOH . E 3 HOH A 38 199 81 HOH HOH . E 3 HOH A 39 200 83 HOH HOH . E 3 HOH A 40 201 84 HOH HOH . E 3 HOH A 41 202 86 HOH HOH . E 3 HOH A 42 203 89 HOH HOH . E 3 HOH A 43 204 90 HOH HOH . F 3 HOH B 1 161 1 HOH HOH . F 3 HOH B 2 162 2 HOH HOH . F 3 HOH B 3 163 4 HOH HOH . F 3 HOH B 4 164 5 HOH HOH . F 3 HOH B 5 165 9 HOH HOH . F 3 HOH B 6 166 10 HOH HOH . F 3 HOH B 7 167 14 HOH HOH . F 3 HOH B 8 168 15 HOH HOH . F 3 HOH B 9 169 17 HOH HOH . F 3 HOH B 10 170 20 HOH HOH . F 3 HOH B 11 171 22 HOH HOH . F 3 HOH B 12 172 26 HOH HOH . F 3 HOH B 13 173 27 HOH HOH . F 3 HOH B 14 174 29 HOH HOH . F 3 HOH B 15 175 30 HOH HOH . F 3 HOH B 16 176 31 HOH HOH . F 3 HOH B 17 177 33 HOH HOH . F 3 HOH B 18 178 35 HOH HOH . F 3 HOH B 19 179 36 HOH HOH . F 3 HOH B 20 180 37 HOH HOH . F 3 HOH B 21 181 42 HOH HOH . F 3 HOH B 22 182 43 HOH HOH . F 3 HOH B 23 183 46 HOH HOH . F 3 HOH B 24 184 48 HOH HOH . F 3 HOH B 25 185 49 HOH HOH . F 3 HOH B 26 186 50 HOH HOH . F 3 HOH B 27 187 51 HOH HOH . F 3 HOH B 28 188 52 HOH HOH . F 3 HOH B 29 189 54 HOH HOH . F 3 HOH B 30 190 56 HOH HOH . F 3 HOH B 31 191 57 HOH HOH . F 3 HOH B 32 192 59 HOH HOH . F 3 HOH B 33 193 60 HOH HOH . F 3 HOH B 34 194 62 HOH HOH . F 3 HOH B 35 195 66 HOH HOH . F 3 HOH B 36 196 76 HOH HOH . F 3 HOH B 37 197 70 HOH HOH . F 3 HOH B 38 198 71 HOH HOH . F 3 HOH B 39 199 73 HOH HOH . F 3 HOH B 40 200 75 HOH HOH . F 3 HOH B 41 201 77 HOH HOH . F 3 HOH B 42 202 78 HOH HOH . F 3 HOH B 43 203 82 HOH HOH . F 3 HOH B 44 204 85 HOH HOH . F 3 HOH B 45 205 87 HOH HOH . F 3 HOH B 46 206 88 HOH HOH . F 3 HOH B 47 207 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O7 RES . . . C 2 43.342 29.403 13.943 1 23.46 ? O7 RES 160 A 1 HETATM 2 P P RES . . . C 2 42.875 29.341 12.508 1 21.91 ? P RES 160 A 1 HETATM 3 O O5 RES . . . C 2 43.517 28.236 11.737 1 18.84 ? O5 RES 160 A 1 HETATM 4 O O6 RES . . . C 2 42.747 30.689 11.819 1 19.36 ? O6 RES 160 A 1 HETATM 5 O O4 RES . . . C 2 41.329 28.838 12.663 1 23.93 ? O4 RES 160 A 1 HETATM 6 C C4 RES . . . C 2 40.246 29.751 12.907 1 23.76 ? C4 RES 160 A 1 HETATM 7 C C3 RES . . . C 2 39.012 28.9 13.182 1 23.82 ? C3 RES 160 A 1 HETATM 8 O O3 RES . . . C 2 39.277 28.034 14.289 1 25.72 ? O3 RES 160 A 1 HETATM 9 C C2 RES . . . C 2 37.708 29.654 13.452 1 22.76 ? C2 RES 160 A 1 HETATM 10 O O2 RES . . . C 2 37.651 30.889 12.722 1 23.19 ? O2 RES 160 A 1 HETATM 11 C C1 RES . . . C 2 36.566 28.704 13.141 1 23.05 ? C1 RES 160 A 1 HETATM 12 O O1 RES . . . C 2 36.401 28.138 12.06 1 22.2 ? O1 RES 160 A 1 HETATM 13 N N RES . . . C 2 35.75 28.444 14.15 1 23.28 ? N RES 160 A 1 HETATM 14 O ON RES . . . C 2 34.704 27.571 13.92 1 23.73 ? ON RES 160 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 14 #