data_3K91 # _model_server_result.job_id lZtqOyYsS8MoCx4vROAghQ _model_server_result.datetime_utc '2024-11-14 18:47:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k91 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":154}' # _entry.id 3K91 # _exptl.entry_id 3K91 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 160.325 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PENTASULFIDE-SULFUR _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3K91 _cell.length_a 40.049 _cell.length_b 57.925 _cell.length_c 104.988 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K91 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 57 A CYS 57 1_555 A SG CYS 146 A CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf2 B SG CYS 57 B CYS 57 1_555 B SG CYS 146 B CYS 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? # _chem_comp.formula 'S5 -2' _chem_comp.formula_weight 160.325 _chem_comp.id PS5 _chem_comp.mon_nstd_flag . _chem_comp.name PENTASULFIDE-SULFUR _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 S2 PS5 sing 258 n n S2 S3 PS5 sing 259 n n S3 S4 PS5 sing 260 n n S4 S5 PS5 sing 261 n n # _atom_sites.entry_id 3K91 _atom_sites.fract_transf_matrix[1][1] 0.024969 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017264 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PS5 A 1 154 1 PS5 PS5 . D 3 HOH A 1 155 1 HOH HOH . D 3 HOH A 2 156 156 HOH HOH . D 3 HOH A 3 157 2 HOH HOH . D 3 HOH A 4 158 3 HOH HOH . D 3 HOH A 5 159 159 HOH HOH . D 3 HOH A 6 160 6 HOH HOH . D 3 HOH A 7 161 161 HOH HOH . D 3 HOH A 8 162 9 HOH HOH . D 3 HOH A 9 163 10 HOH HOH . D 3 HOH A 10 164 164 HOH HOH . D 3 HOH A 11 165 165 HOH HOH . D 3 HOH A 12 166 12 HOH HOH . D 3 HOH A 13 167 167 HOH HOH . D 3 HOH A 14 168 168 HOH HOH . D 3 HOH A 15 169 15 HOH HOH . D 3 HOH A 16 170 170 HOH HOH . D 3 HOH A 17 171 171 HOH HOH . D 3 HOH A 18 172 172 HOH HOH . D 3 HOH A 19 174 174 HOH HOH . D 3 HOH A 20 175 175 HOH HOH . D 3 HOH A 21 176 176 HOH HOH . D 3 HOH A 22 177 16 HOH HOH . D 3 HOH A 23 178 17 HOH HOH . D 3 HOH A 24 179 179 HOH HOH . D 3 HOH A 25 180 180 HOH HOH . D 3 HOH A 26 181 18 HOH HOH . D 3 HOH A 27 182 182 HOH HOH . D 3 HOH A 28 183 183 HOH HOH . D 3 HOH A 29 184 184 HOH HOH . D 3 HOH A 30 185 185 HOH HOH . D 3 HOH A 31 186 186 HOH HOH . D 3 HOH A 32 187 19 HOH HOH . D 3 HOH A 33 188 188 HOH HOH . D 3 HOH A 34 189 23 HOH HOH . D 3 HOH A 35 190 24 HOH HOH . D 3 HOH A 36 191 191 HOH HOH . D 3 HOH A 37 192 192 HOH HOH . D 3 HOH A 38 193 26 HOH HOH . D 3 HOH A 39 194 194 HOH HOH . D 3 HOH A 40 195 195 HOH HOH . D 3 HOH A 41 196 27 HOH HOH . D 3 HOH A 42 197 30 HOH HOH . D 3 HOH A 43 198 198 HOH HOH . D 3 HOH A 44 199 32 HOH HOH . D 3 HOH A 45 200 200 HOH HOH . D 3 HOH A 46 201 201 HOH HOH . D 3 HOH A 47 202 33 HOH HOH . D 3 HOH A 48 203 203 HOH HOH . D 3 HOH A 49 204 35 HOH HOH . D 3 HOH A 50 205 37 HOH HOH . D 3 HOH A 51 206 38 HOH HOH . D 3 HOH A 52 207 207 HOH HOH . D 3 HOH A 53 208 208 HOH HOH . D 3 HOH A 54 209 209 HOH HOH . D 3 HOH A 55 210 39 HOH HOH . D 3 HOH A 56 211 211 HOH HOH . D 3 HOH A 57 212 212 HOH HOH . D 3 HOH A 58 213 213 HOH HOH . D 3 HOH A 59 214 214 HOH HOH . D 3 HOH A 60 215 41 HOH HOH . D 3 HOH A 61 216 216 HOH HOH . D 3 HOH A 62 217 42 HOH HOH . D 3 HOH A 63 218 218 HOH HOH . D 3 HOH A 64 219 219 HOH HOH . D 3 HOH A 65 220 43 HOH HOH . D 3 HOH A 66 221 221 HOH HOH . D 3 HOH A 67 222 45 HOH HOH . D 3 HOH A 68 223 47 HOH HOH . D 3 HOH A 69 224 48 HOH HOH . D 3 HOH A 70 225 49 HOH HOH . D 3 HOH A 71 226 50 HOH HOH . D 3 HOH A 72 227 53 HOH HOH . D 3 HOH A 73 228 228 HOH HOH . D 3 HOH A 74 229 229 HOH HOH . D 3 HOH A 75 230 230 HOH HOH . D 3 HOH A 76 231 54 HOH HOH . D 3 HOH A 77 232 232 HOH HOH . D 3 HOH A 78 233 59 HOH HOH . D 3 HOH A 79 234 234 HOH HOH . D 3 HOH A 80 235 235 HOH HOH . D 3 HOH A 81 236 236 HOH HOH . D 3 HOH A 82 237 60 HOH HOH . D 3 HOH A 83 238 238 HOH HOH . D 3 HOH A 84 239 61 HOH HOH . D 3 HOH A 85 240 240 HOH HOH . D 3 HOH A 86 241 241 HOH HOH . D 3 HOH A 87 242 63 HOH HOH . D 3 HOH A 88 243 64 HOH HOH . D 3 HOH A 89 244 65 HOH HOH . D 3 HOH A 90 245 66 HOH HOH . D 3 HOH A 91 246 246 HOH HOH . D 3 HOH A 92 247 247 HOH HOH . D 3 HOH A 93 248 248 HOH HOH . D 3 HOH A 94 249 249 HOH HOH . D 3 HOH A 95 250 250 HOH HOH . D 3 HOH A 96 251 67 HOH HOH . D 3 HOH A 97 252 71 HOH HOH . D 3 HOH A 98 253 74 HOH HOH . D 3 HOH A 99 254 254 HOH HOH . D 3 HOH A 100 255 255 HOH HOH . D 3 HOH A 101 256 75 HOH HOH . D 3 HOH A 102 257 76 HOH HOH . D 3 HOH A 103 258 79 HOH HOH . D 3 HOH A 104 259 80 HOH HOH . D 3 HOH A 105 260 81 HOH HOH . D 3 HOH A 106 261 84 HOH HOH . D 3 HOH A 107 262 86 HOH HOH . D 3 HOH A 108 263 87 HOH HOH . D 3 HOH A 109 264 90 HOH HOH . D 3 HOH A 110 265 93 HOH HOH . D 3 HOH A 111 266 94 HOH HOH . D 3 HOH A 112 267 99 HOH HOH . D 3 HOH A 113 268 103 HOH HOH . D 3 HOH A 114 269 104 HOH HOH . D 3 HOH A 115 270 106 HOH HOH . D 3 HOH A 116 271 110 HOH HOH . D 3 HOH A 117 272 111 HOH HOH . D 3 HOH A 118 273 115 HOH HOH . D 3 HOH A 119 274 116 HOH HOH . D 3 HOH A 120 275 117 HOH HOH . D 3 HOH A 121 276 118 HOH HOH . D 3 HOH A 122 277 122 HOH HOH . D 3 HOH A 123 278 124 HOH HOH . D 3 HOH A 124 279 125 HOH HOH . D 3 HOH A 125 280 127 HOH HOH . D 3 HOH A 126 281 129 HOH HOH . D 3 HOH A 127 282 131 HOH HOH . D 3 HOH A 128 283 132 HOH HOH . D 3 HOH A 129 284 133 HOH HOH . D 3 HOH A 130 285 135 HOH HOH . D 3 HOH A 131 286 136 HOH HOH . D 3 HOH A 132 287 139 HOH HOH . D 3 HOH A 133 288 143 HOH HOH . D 3 HOH A 134 289 146 HOH HOH . D 3 HOH A 135 290 147 HOH HOH . D 3 HOH A 136 291 148 HOH HOH . D 3 HOH A 137 292 151 HOH HOH . D 3 HOH A 138 293 152 HOH HOH . D 3 HOH A 139 294 154 HOH HOH . E 3 HOH B 1 154 4 HOH HOH . E 3 HOH B 2 155 155 HOH HOH . E 3 HOH B 3 156 5 HOH HOH . E 3 HOH B 4 157 157 HOH HOH . E 3 HOH B 5 158 158 HOH HOH . E 3 HOH B 6 159 7 HOH HOH . E 3 HOH B 7 160 160 HOH HOH . E 3 HOH B 8 161 8 HOH HOH . E 3 HOH B 9 162 162 HOH HOH . E 3 HOH B 10 163 163 HOH HOH . E 3 HOH B 11 164 11 HOH HOH . E 3 HOH B 12 165 13 HOH HOH . E 3 HOH B 13 166 166 HOH HOH . E 3 HOH B 14 167 14 HOH HOH . E 3 HOH B 15 168 20 HOH HOH . E 3 HOH B 16 169 169 HOH HOH . E 3 HOH B 17 170 21 HOH HOH . E 3 HOH B 18 171 22 HOH HOH . E 3 HOH B 19 172 25 HOH HOH . E 3 HOH B 20 173 173 HOH HOH . E 3 HOH B 21 174 29 HOH HOH . E 3 HOH B 22 175 31 HOH HOH . E 3 HOH B 23 176 34 HOH HOH . E 3 HOH B 24 177 177 HOH HOH . E 3 HOH B 25 178 178 HOH HOH . E 3 HOH B 26 179 36 HOH HOH . E 3 HOH B 27 180 40 HOH HOH . E 3 HOH B 28 181 181 HOH HOH . E 3 HOH B 29 182 44 HOH HOH . E 3 HOH B 30 183 46 HOH HOH . E 3 HOH B 31 184 51 HOH HOH . E 3 HOH B 32 185 52 HOH HOH . E 3 HOH B 33 186 55 HOH HOH . E 3 HOH B 34 187 187 HOH HOH . E 3 HOH B 35 188 56 HOH HOH . E 3 HOH B 36 189 189 HOH HOH . E 3 HOH B 37 190 190 HOH HOH . E 3 HOH B 38 191 57 HOH HOH . E 3 HOH B 39 192 58 HOH HOH . E 3 HOH B 40 193 193 HOH HOH . E 3 HOH B 41 194 62 HOH HOH . E 3 HOH B 42 195 68 HOH HOH . E 3 HOH B 43 196 196 HOH HOH . E 3 HOH B 44 197 197 HOH HOH . E 3 HOH B 45 198 69 HOH HOH . E 3 HOH B 46 199 199 HOH HOH . E 3 HOH B 47 200 70 HOH HOH . E 3 HOH B 48 201 72 HOH HOH . E 3 HOH B 49 202 202 HOH HOH . E 3 HOH B 50 203 73 HOH HOH . E 3 HOH B 51 204 204 HOH HOH . E 3 HOH B 52 205 205 HOH HOH . E 3 HOH B 53 206 206 HOH HOH . E 3 HOH B 54 207 77 HOH HOH . E 3 HOH B 55 208 78 HOH HOH . E 3 HOH B 56 209 82 HOH HOH . E 3 HOH B 57 210 210 HOH HOH . E 3 HOH B 58 211 83 HOH HOH . E 3 HOH B 59 212 85 HOH HOH . E 3 HOH B 60 213 88 HOH HOH . E 3 HOH B 61 214 89 HOH HOH . E 3 HOH B 62 215 215 HOH HOH . E 3 HOH B 63 216 91 HOH HOH . E 3 HOH B 64 217 217 HOH HOH . E 3 HOH B 65 218 92 HOH HOH . E 3 HOH B 66 219 95 HOH HOH . E 3 HOH B 67 220 220 HOH HOH . E 3 HOH B 68 221 96 HOH HOH . E 3 HOH B 69 222 222 HOH HOH . E 3 HOH B 70 223 223 HOH HOH . E 3 HOH B 71 224 224 HOH HOH . E 3 HOH B 72 225 225 HOH HOH . E 3 HOH B 73 226 226 HOH HOH . E 3 HOH B 74 227 227 HOH HOH . E 3 HOH B 75 228 97 HOH HOH . E 3 HOH B 76 229 98 HOH HOH . E 3 HOH B 77 230 100 HOH HOH . E 3 HOH B 78 231 231 HOH HOH . E 3 HOH B 79 232 101 HOH HOH . E 3 HOH B 80 233 233 HOH HOH . E 3 HOH B 81 234 102 HOH HOH . E 3 HOH B 82 235 105 HOH HOH . E 3 HOH B 83 236 107 HOH HOH . E 3 HOH B 84 237 237 HOH HOH . E 3 HOH B 85 238 108 HOH HOH . E 3 HOH B 86 239 239 HOH HOH . E 3 HOH B 87 240 109 HOH HOH . E 3 HOH B 88 241 112 HOH HOH . E 3 HOH B 89 242 242 HOH HOH . E 3 HOH B 90 243 243 HOH HOH . E 3 HOH B 91 244 244 HOH HOH . E 3 HOH B 92 245 245 HOH HOH . E 3 HOH B 93 246 113 HOH HOH . E 3 HOH B 94 247 114 HOH HOH . E 3 HOH B 95 248 119 HOH HOH . E 3 HOH B 96 249 120 HOH HOH . E 3 HOH B 97 250 121 HOH HOH . E 3 HOH B 98 251 251 HOH HOH . E 3 HOH B 99 252 252 HOH HOH . E 3 HOH B 100 253 253 HOH HOH . E 3 HOH B 101 254 123 HOH HOH . E 3 HOH B 102 255 126 HOH HOH . E 3 HOH B 103 256 128 HOH HOH . E 3 HOH B 104 257 130 HOH HOH . E 3 HOH B 105 258 134 HOH HOH . E 3 HOH B 106 259 137 HOH HOH . E 3 HOH B 107 260 138 HOH HOH . E 3 HOH B 108 261 140 HOH HOH . E 3 HOH B 109 262 141 HOH HOH . E 3 HOH B 110 263 142 HOH HOH . E 3 HOH B 111 264 144 HOH HOH . E 3 HOH B 112 265 145 HOH HOH . E 3 HOH B 113 266 149 HOH HOH . E 3 HOH B 114 267 150 HOH HOH . E 3 HOH B 115 268 153 HOH HOH . E 3 HOH B 116 269 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 PS5 . . . C 2 1.698 14.102 -5.48 0.83 32.71 ? S1 PS5 154 A 1 HETATM 2 S S2 PS5 . . . C 2 2.155 15.007 -7.244 0.55 42.75 ? S2 PS5 154 A 1 HETATM 3 S S3 PS5 . . . C 2 0.918 16.623 -7.314 0.56 31.8 ? S3 PS5 154 A 1 HETATM 4 S S4 PS5 . . . C 2 1.804 17.983 -6.082 0.62 40.17 ? S4 PS5 154 A 1 HETATM 5 S S5 PS5 . . . C 2 3.181 18.891 -7.267 0.85 30.17 ? S5 PS5 154 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #