data_3K98 # _model_server_result.job_id xkLNnIxKZKFC2IrV6fV85Q _model_server_result.datetime_utc '2024-12-21 17:47:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3k98 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 3K98 # _exptl.entry_id 3K98 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3K98 _cell.length_a 45.986 _cell.length_b 80.052 _cell.length_c 118.091 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3K98 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 PISA dimeric 2 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 A,B,C,D,E,F,G 3 1 A,C,D,F 4 1 B,E,G 4 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_455 x-1,y,z 1 0 0 0 1 0 0 0 1 -45.986 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 291 n n P O2 PO4 sing 292 n n P O3 PO4 sing 293 n n P O4 PO4 sing 294 n n # _atom_sites.entry_id 3K98 _atom_sites.fract_transf_matrix[1][1] 0.021746 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012492 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008468 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 1RC A 1 901 901 1RC 1RC . D 3 PO4 A 1 902 902 PO4 PO4 . E 2 1RC B 1 901 901 1RC 1RC . F 4 HOH A 1 1 1 HOH WAT . F 4 HOH A 2 2 2 HOH WAT . F 4 HOH A 3 4 4 HOH WAT . F 4 HOH A 4 7 7 HOH WAT . F 4 HOH A 5 240 8 HOH WAT . F 4 HOH A 6 241 9 HOH WAT . F 4 HOH A 7 242 12 HOH WAT . F 4 HOH A 8 243 13 HOH WAT . F 4 HOH A 9 244 15 HOH WAT . F 4 HOH A 10 245 16 HOH WAT . F 4 HOH A 11 246 17 HOH WAT . F 4 HOH A 12 247 18 HOH WAT . F 4 HOH A 13 248 19 HOH WAT . F 4 HOH A 14 249 20 HOH WAT . F 4 HOH A 15 250 21 HOH WAT . F 4 HOH A 16 251 28 HOH WAT . F 4 HOH A 17 252 29 HOH WAT . F 4 HOH A 18 253 30 HOH WAT . F 4 HOH A 19 254 31 HOH WAT . F 4 HOH A 20 255 32 HOH WAT . F 4 HOH A 21 256 37 HOH WAT . F 4 HOH A 22 257 41 HOH WAT . F 4 HOH A 23 258 48 HOH WAT . F 4 HOH A 24 259 51 HOH WAT . F 4 HOH A 25 260 53 HOH WAT . F 4 HOH A 26 261 54 HOH WAT . F 4 HOH A 27 262 56 HOH WAT . F 4 HOH A 28 263 57 HOH WAT . F 4 HOH A 29 264 59 HOH WAT . F 4 HOH A 30 265 60 HOH WAT . F 4 HOH A 31 266 61 HOH WAT . F 4 HOH A 32 267 63 HOH WAT . F 4 HOH A 33 268 64 HOH WAT . F 4 HOH A 34 269 65 HOH WAT . F 4 HOH A 35 270 68 HOH WAT . F 4 HOH A 36 271 72 HOH WAT . F 4 HOH A 37 272 73 HOH WAT . F 4 HOH A 38 273 78 HOH WAT . F 4 HOH A 39 274 80 HOH WAT . F 4 HOH A 40 275 84 HOH WAT . F 4 HOH A 41 276 85 HOH WAT . F 4 HOH A 42 277 86 HOH WAT . F 4 HOH A 43 278 89 HOH WAT . F 4 HOH A 44 279 90 HOH WAT . F 4 HOH A 45 280 92 HOH WAT . F 4 HOH A 46 281 95 HOH WAT . F 4 HOH A 47 282 98 HOH WAT . F 4 HOH A 48 283 99 HOH WAT . F 4 HOH A 49 284 101 HOH WAT . F 4 HOH A 50 285 102 HOH WAT . F 4 HOH A 51 286 103 HOH WAT . F 4 HOH A 52 287 105 HOH WAT . F 4 HOH A 53 288 106 HOH WAT . F 4 HOH A 54 289 108 HOH WAT . F 4 HOH A 55 290 109 HOH WAT . F 4 HOH A 56 291 111 HOH WAT . F 4 HOH A 57 292 112 HOH WAT . F 4 HOH A 58 293 113 HOH WAT . F 4 HOH A 59 294 114 HOH WAT . F 4 HOH A 60 295 115 HOH WAT . F 4 HOH A 61 296 117 HOH WAT . F 4 HOH A 62 297 123 HOH WAT . F 4 HOH A 63 298 124 HOH WAT . F 4 HOH A 64 299 126 HOH WAT . F 4 HOH A 65 300 128 HOH WAT . F 4 HOH A 66 301 129 HOH WAT . G 4 HOH B 1 3 3 HOH WAT . G 4 HOH B 2 5 5 HOH WAT . G 4 HOH B 3 6 6 HOH WAT . G 4 HOH B 4 240 10 HOH WAT . G 4 HOH B 5 241 11 HOH WAT . G 4 HOH B 6 242 14 HOH WAT . G 4 HOH B 7 243 22 HOH WAT . G 4 HOH B 8 244 23 HOH WAT . G 4 HOH B 9 245 24 HOH WAT . G 4 HOH B 10 246 25 HOH WAT . G 4 HOH B 11 247 26 HOH WAT . G 4 HOH B 12 248 27 HOH WAT . G 4 HOH B 13 249 33 HOH WAT . G 4 HOH B 14 250 34 HOH WAT . G 4 HOH B 15 251 35 HOH WAT . G 4 HOH B 16 252 36 HOH WAT . G 4 HOH B 17 253 38 HOH WAT . G 4 HOH B 18 254 39 HOH WAT . G 4 HOH B 19 255 40 HOH WAT . G 4 HOH B 20 256 42 HOH WAT . G 4 HOH B 21 257 43 HOH WAT . G 4 HOH B 22 258 44 HOH WAT . G 4 HOH B 23 259 45 HOH WAT . G 4 HOH B 24 260 46 HOH WAT . G 4 HOH B 25 261 47 HOH WAT . G 4 HOH B 26 262 49 HOH WAT . G 4 HOH B 27 263 50 HOH WAT . G 4 HOH B 28 264 52 HOH WAT . G 4 HOH B 29 265 55 HOH WAT . G 4 HOH B 30 266 58 HOH WAT . G 4 HOH B 31 267 62 HOH WAT . G 4 HOH B 32 268 66 HOH WAT . G 4 HOH B 33 269 67 HOH WAT . G 4 HOH B 34 270 69 HOH WAT . G 4 HOH B 35 271 70 HOH WAT . G 4 HOH B 36 272 71 HOH WAT . G 4 HOH B 37 273 74 HOH WAT . G 4 HOH B 38 274 75 HOH WAT . G 4 HOH B 39 275 76 HOH WAT . G 4 HOH B 40 276 77 HOH WAT . G 4 HOH B 41 277 79 HOH WAT . G 4 HOH B 42 278 81 HOH WAT . G 4 HOH B 43 279 82 HOH WAT . G 4 HOH B 44 280 83 HOH WAT . G 4 HOH B 45 281 87 HOH WAT . G 4 HOH B 46 282 88 HOH WAT . G 4 HOH B 47 283 91 HOH WAT . G 4 HOH B 48 284 93 HOH WAT . G 4 HOH B 49 285 94 HOH WAT . G 4 HOH B 50 286 96 HOH WAT . G 4 HOH B 51 287 97 HOH WAT . G 4 HOH B 52 288 100 HOH WAT . G 4 HOH B 53 289 104 HOH WAT . G 4 HOH B 54 290 107 HOH WAT . G 4 HOH B 55 291 110 HOH WAT . G 4 HOH B 56 292 116 HOH WAT . G 4 HOH B 57 293 118 HOH WAT . G 4 HOH B 58 294 119 HOH WAT . G 4 HOH B 59 295 120 HOH WAT . G 4 HOH B 60 296 121 HOH WAT . G 4 HOH B 61 297 122 HOH WAT . G 4 HOH B 62 298 125 HOH WAT . G 4 HOH B 63 299 127 HOH WAT . G 4 HOH B 64 300 130 HOH WAT . G 4 HOH B 65 301 131 HOH WAT . G 4 HOH B 66 302 132 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 3 17.873 23.798 38.94 1 114.01 ? P PO4 902 A 1 HETATM 2 O O1 PO4 . . . D 3 16.931 24.829 38.431 1 113.89 ? O1 PO4 902 A 1 HETATM 3 O O2 PO4 . . . D 3 17.594 23.535 40.374 1 113.46 ? O2 PO4 902 A 1 HETATM 4 O O3 PO4 . . . D 3 17.698 22.543 38.162 1 113.18 ? O3 PO4 902 A 1 HETATM 5 O O4 PO4 . . . D 3 19.27 24.285 38.79 1 113.8 ? O4 PO4 902 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 476 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #