data_3KAB # _model_server_result.job_id -LPRMVmIouwNS71xx5hMvg _model_server_result.datetime_utc '2024-11-17 11:39:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kab # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":164}' # _entry.id 3KAB # _exptl.entry_id 3KAB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 546.646 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3KAB _cell.length_a 68.391 _cell.length_b 68.391 _cell.length_c 79.811 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KAB _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H50 O13' _chem_comp.formula_weight 546.646 _chem_comp.id 12P _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O37 C36 12P sing 1 n n O37 H37 12P sing 2 n n C36 C35 12P sing 3 n n C36 H361 12P sing 4 n n C36 H362 12P sing 5 n n C35 O34 12P sing 6 n n C35 H351 12P sing 7 n n C35 H352 12P sing 8 n n O34 C33 12P sing 9 n n C33 C32 12P sing 10 n n C33 H331 12P sing 11 n n C33 H332 12P sing 12 n n C32 O31 12P sing 13 n n C32 H321 12P sing 14 n n C32 H322 12P sing 15 n n O31 C30 12P sing 16 n n C30 C29 12P sing 17 n n C30 H301 12P sing 18 n n C30 H302 12P sing 19 n n C29 O28 12P sing 20 n n C29 H291 12P sing 21 n n C29 H292 12P sing 22 n n O28 C27 12P sing 23 n n C27 C26 12P sing 24 n n C27 H271 12P sing 25 n n C27 H272 12P sing 26 n n C26 O25 12P sing 27 n n C26 H261 12P sing 28 n n C26 H262 12P sing 29 n n O25 C24 12P sing 30 n n C24 C23 12P sing 31 n n C24 H241 12P sing 32 n n C24 H242 12P sing 33 n n C23 O22 12P sing 34 n n C23 H231 12P sing 35 n n C23 H232 12P sing 36 n n O22 C21 12P sing 37 n n C21 C20 12P sing 38 n n C21 H211 12P sing 39 n n C21 H212 12P sing 40 n n C20 O19 12P sing 41 n n C20 H201 12P sing 42 n n C20 H202 12P sing 43 n n O19 C18 12P sing 44 n n C18 C17 12P sing 45 n n C18 H181 12P sing 46 n n C18 H182 12P sing 47 n n C17 O16 12P sing 48 n n C17 H171 12P sing 49 n n C17 H172 12P sing 50 n n O16 C15 12P sing 51 n n C15 C14 12P sing 52 n n C15 H151 12P sing 53 n n C15 H152 12P sing 54 n n C14 O13 12P sing 55 n n C14 H141 12P sing 56 n n C14 H142 12P sing 57 n n O13 C12 12P sing 58 n n C12 C11 12P sing 59 n n C12 H121 12P sing 60 n n C12 H122 12P sing 61 n n C11 O10 12P sing 62 n n C11 H111 12P sing 63 n n C11 H112 12P sing 64 n n O10 C9 12P sing 65 n n C9 C8 12P sing 66 n n C9 H91 12P sing 67 n n C9 H92 12P sing 68 n n C8 O7 12P sing 69 n n C8 H81 12P sing 70 n n C8 H82 12P sing 71 n n O7 C6 12P sing 72 n n C6 C5 12P sing 73 n n C6 H61 12P sing 74 n n C6 H62 12P sing 75 n n C5 O4 12P sing 76 n n C5 H51 12P sing 77 n n C5 H52 12P sing 78 n n O4 C3 12P sing 79 n n C3 C2 12P sing 80 n n C3 H31 12P sing 81 n n C3 H32 12P sing 82 n n C2 O1 12P sing 83 n n C2 H21 12P sing 84 n n C2 H22 12P sing 85 n n O1 HO1 12P sing 86 n n # _atom_sites.entry_id 3KAB _atom_sites.fract_transf_matrix[1][1] 0.014622 _atom_sites.fract_transf_matrix[1][2] 0.008442 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016884 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01253 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 12P A 1 164 1 12P 12P . C 3 SO4 A 1 165 1 SO4 SO4 . D 4 4BL A 1 166 1 4BL 4BL . E 5 HOH A 1 167 2 HOH HOH . E 5 HOH A 2 168 4 HOH HOH . E 5 HOH A 3 169 8 HOH HOH . E 5 HOH A 4 170 9 HOH HOH . E 5 HOH A 5 171 10 HOH HOH . E 5 HOH A 6 172 13 HOH HOH . E 5 HOH A 7 173 14 HOH HOH . E 5 HOH A 8 174 15 HOH HOH . E 5 HOH A 9 175 18 HOH HOH . E 5 HOH A 10 176 19 HOH HOH . E 5 HOH A 11 177 22 HOH HOH . E 5 HOH A 12 178 23 HOH HOH . E 5 HOH A 13 179 26 HOH HOH . E 5 HOH A 14 180 27 HOH HOH . E 5 HOH A 15 181 28 HOH HOH . E 5 HOH A 16 182 29 HOH HOH . E 5 HOH A 17 183 30 HOH HOH . E 5 HOH A 18 184 32 HOH HOH . E 5 HOH A 19 185 33 HOH HOH . E 5 HOH A 20 186 34 HOH HOH . E 5 HOH A 21 187 36 HOH HOH . E 5 HOH A 22 188 38 HOH HOH . E 5 HOH A 23 189 39 HOH HOH . E 5 HOH A 24 190 41 HOH HOH . E 5 HOH A 25 191 44 HOH HOH . E 5 HOH A 26 192 45 HOH HOH . E 5 HOH A 27 193 47 HOH HOH . E 5 HOH A 28 194 48 HOH HOH . E 5 HOH A 29 195 49 HOH HOH . E 5 HOH A 30 196 51 HOH HOH . E 5 HOH A 31 197 52 HOH HOH . E 5 HOH A 32 198 53 HOH HOH . E 5 HOH A 33 199 54 HOH HOH . E 5 HOH A 34 200 56 HOH HOH . E 5 HOH A 35 201 59 HOH HOH . E 5 HOH A 36 202 60 HOH HOH . E 5 HOH A 37 203 61 HOH HOH . E 5 HOH A 38 204 64 HOH HOH . E 5 HOH A 39 205 67 HOH HOH . E 5 HOH A 40 206 68 HOH HOH . E 5 HOH A 41 207 69 HOH HOH . E 5 HOH A 42 208 70 HOH HOH . E 5 HOH A 43 209 71 HOH HOH . E 5 HOH A 44 210 72 HOH HOH . E 5 HOH A 45 211 73 HOH HOH . E 5 HOH A 46 212 74 HOH HOH . E 5 HOH A 47 213 75 HOH HOH . E 5 HOH A 48 214 77 HOH HOH . E 5 HOH A 49 215 80 HOH HOH . E 5 HOH A 50 216 81 HOH HOH . E 5 HOH A 51 217 82 HOH HOH . E 5 HOH A 52 218 83 HOH HOH . E 5 HOH A 53 219 84 HOH HOH . E 5 HOH A 54 220 85 HOH HOH . E 5 HOH A 55 221 87 HOH HOH . E 5 HOH A 56 222 89 HOH HOH . E 5 HOH A 57 223 91 HOH HOH . E 5 HOH A 58 224 92 HOH HOH . E 5 HOH A 59 225 96 HOH HOH . E 5 HOH A 60 226 98 HOH HOH . E 5 HOH A 61 227 102 HOH HOH . E 5 HOH A 62 228 103 HOH HOH . E 5 HOH A 63 229 104 HOH HOH . E 5 HOH A 64 230 113 HOH HOH . E 5 HOH A 65 231 117 HOH HOH . E 5 HOH A 66 232 118 HOH HOH . E 5 HOH A 67 233 119 HOH HOH . E 5 HOH A 68 234 125 HOH HOH . E 5 HOH A 69 235 126 HOH HOH . E 5 HOH A 70 236 127 HOH HOH . E 5 HOH A 71 237 128 HOH HOH . E 5 HOH A 72 238 129 HOH HOH . E 5 HOH A 73 239 131 HOH HOH . E 5 HOH A 74 240 132 HOH HOH . E 5 HOH A 75 241 133 HOH HOH . E 5 HOH A 76 242 134 HOH HOH . E 5 HOH A 77 243 135 HOH HOH . E 5 HOH A 78 244 136 HOH HOH . E 5 HOH A 79 245 137 HOH HOH . E 5 HOH A 80 246 138 HOH HOH . E 5 HOH A 81 247 139 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C32 12P . . . B 2 38.058 4.939 29.002 1 49.37 ? C32 12P 164 A 1 HETATM 2 O O31 12P . . . B 2 37.102 6.014 29.21 1 57.64 ? O31 12P 164 A 1 HETATM 3 C C30 12P . . . B 2 36.586 6.292 30.558 1 54.72 ? C30 12P 164 A 1 HETATM 4 C C29 12P . . . B 2 35.1 6.7 30.649 1 55.56 ? C29 12P 164 A 1 HETATM 5 O O28 12P . . . B 2 34.551 6.582 31.989 1 56.88 ? O28 12P 164 A 1 HETATM 6 C C27 12P . . . B 2 33.248 6 32.269 1 55.55 ? C27 12P 164 A 1 HETATM 7 C C26 12P . . . B 2 33.287 4.472 32.391 1 56.03 ? C26 12P 164 A 1 HETATM 8 O O25 12P . . . B 2 32.124 3.768 31.869 1 56.25 ? O25 12P 164 A 1 HETATM 9 C C24 12P . . . B 2 32.408 2.388 31.506 1 56.57 ? C24 12P 164 A 1 HETATM 10 C C23 12P . . . B 2 33.012 1.536 32.636 1 55.9 ? C23 12P 164 A 1 HETATM 11 O O22 12P . . . B 2 33.759 0.384 32.212 1 58.07 ? O22 12P 164 A 1 HETATM 12 C C21 12P . . . B 2 34.994 0.122 32.947 1 55.27 ? C21 12P 164 A 1 HETATM 13 C C20 12P . . . B 2 34.717 -0.323 34.381 1 56.31 ? C20 12P 164 A 1 HETATM 14 O O19 12P . . . B 2 35.841 -0.259 35.269 1 56.35 ? O19 12P 164 A 1 HETATM 15 C C18 12P . . . B 2 35.454 -0.282 36.652 1 55.93 ? C18 12P 164 A 1 HETATM 16 C C17 12P . . . B 2 34.358 0.746 36.951 1 59.9 ? C17 12P 164 A 1 HETATM 17 O O16 12P . . . B 2 34.469 1.43 38.212 1 64.89 ? O16 12P 164 A 1 HETATM 18 C C15 12P . . . B 2 33.99 2.808 38.19 1 63.64 ? C15 12P 164 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 18 #