data_3KAI # _model_server_result.job_id 0wQx_N4h77Ut5U_caX8aHQ _model_server_result.datetime_utc '2024-11-27 22:46:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kai # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":165}' # _entry.id 3KAI # _exptl.entry_id 3KAI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 399.442 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2-[(2-methyl-5-phenyl-pyrazol-3-yl)carbonylamino]-3-naphthalen-2-yl-propanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3KAI _cell.length_a 68.64 _cell.length_b 68.64 _cell.length_c 79.233 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KAI _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H21 N3 O3' _chem_comp.formula_weight 399.442 _chem_comp.id 4FI _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2-[(2-methyl-5-phenyl-pyrazol-3-yl)carbonylamino]-3-naphthalen-2-yl-propanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C1 4FI doub 87 n y C1 C25 4FI sing 88 n y C1 H1 4FI sing 89 n n C11 C2 4FI sing 90 n y C4 C2 4FI sing 91 n n C2 C3 4FI doub 92 n y C3 C26 4FI sing 93 n y C3 H3 4FI sing 94 n n C5 C4 4FI sing 95 n n C4 H4 4FI sing 96 n n C4 H4A 4FI sing 97 n n N7 C5 4FI sing 98 n n C6 C5 4FI sing 99 n n C5 H5 4FI sing 100 n n O8 C6 4FI doub 101 n n C6 O9 4FI sing 102 n n C10 N7 4FI sing 103 n n N7 HN7 4FI sing 104 n n O9 HO9 4FI sing 105 n n C13 C10 4FI sing 106 n n C10 O12 4FI doub 107 n n C11 H11 4FI sing 108 n n C17 C13 4FI doub 109 n y N14 C13 4FI sing 110 n y N15 N14 4FI sing 111 n y N14 C24 4FI sing 112 n n C16 N15 4FI doub 113 n y C18 C16 4FI sing 114 n y C16 C17 4FI sing 115 n y C17 H17 4FI sing 116 n n C23 C18 4FI doub 117 n y C19 C18 4FI sing 118 n y C20 C19 4FI doub 119 n y C19 H19 4FI sing 120 n n C21 C20 4FI sing 121 n y C20 H20 4FI sing 122 n n C21 C22 4FI doub 123 n y C21 H21 4FI sing 124 n n C22 C23 4FI sing 125 n y C22 H22 4FI sing 126 n n C23 H23 4FI sing 127 n n C24 H24 4FI sing 128 n n C24 H24A 4FI sing 129 n n C24 H24B 4FI sing 130 n n C25 C30 4FI sing 131 n y C25 C26 4FI doub 132 n y C26 C27 4FI sing 133 n y C27 C28 4FI doub 134 n y C27 H27 4FI sing 135 n n C29 C28 4FI sing 136 n y C28 H28 4FI sing 137 n n C30 C29 4FI doub 138 n y C29 H29 4FI sing 139 n n C30 H30 4FI sing 140 n n # _atom_sites.entry_id 3KAI _atom_sites.fract_transf_matrix[1][1] 0.014569 _atom_sites.fract_transf_matrix[1][2] 0.008411 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016823 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012621 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 12P A 1 164 1 12P 12P . C 3 4FI A 1 165 1 4FI 4FI . D 4 HOH A 1 166 1 HOH HOH . D 4 HOH A 2 167 2 HOH HOH . D 4 HOH A 3 168 3 HOH HOH . D 4 HOH A 4 169 4 HOH HOH . D 4 HOH A 5 170 5 HOH HOH . D 4 HOH A 6 171 6 HOH HOH . D 4 HOH A 7 172 7 HOH HOH . D 4 HOH A 8 173 8 HOH HOH . D 4 HOH A 9 174 9 HOH HOH . D 4 HOH A 10 175 10 HOH HOH . D 4 HOH A 11 176 11 HOH HOH . D 4 HOH A 12 177 12 HOH HOH . D 4 HOH A 13 178 13 HOH HOH . D 4 HOH A 14 179 14 HOH HOH . D 4 HOH A 15 180 15 HOH HOH . D 4 HOH A 16 181 16 HOH HOH . D 4 HOH A 17 182 17 HOH HOH . D 4 HOH A 18 183 18 HOH HOH . D 4 HOH A 19 184 19 HOH HOH . D 4 HOH A 20 185 20 HOH HOH . D 4 HOH A 21 186 21 HOH HOH . D 4 HOH A 22 187 22 HOH HOH . D 4 HOH A 23 188 23 HOH HOH . D 4 HOH A 24 189 24 HOH HOH . D 4 HOH A 25 190 28 HOH HOH . D 4 HOH A 26 191 30 HOH HOH . D 4 HOH A 27 192 31 HOH HOH . D 4 HOH A 28 193 32 HOH HOH . D 4 HOH A 29 194 33 HOH HOH . D 4 HOH A 30 195 34 HOH HOH . D 4 HOH A 31 196 35 HOH HOH . D 4 HOH A 32 197 36 HOH HOH . D 4 HOH A 33 198 37 HOH HOH . D 4 HOH A 34 199 38 HOH HOH . D 4 HOH A 35 200 39 HOH HOH . D 4 HOH A 36 201 40 HOH HOH . D 4 HOH A 37 202 41 HOH HOH . D 4 HOH A 38 203 42 HOH HOH . D 4 HOH A 39 204 43 HOH HOH . D 4 HOH A 40 205 44 HOH HOH . D 4 HOH A 41 206 45 HOH HOH . D 4 HOH A 42 207 46 HOH HOH . D 4 HOH A 43 208 48 HOH HOH . D 4 HOH A 44 209 49 HOH HOH . D 4 HOH A 45 210 50 HOH HOH . D 4 HOH A 46 211 51 HOH HOH . D 4 HOH A 47 212 52 HOH HOH . D 4 HOH A 48 213 54 HOH HOH . D 4 HOH A 49 214 55 HOH HOH . D 4 HOH A 50 215 57 HOH HOH . D 4 HOH A 51 216 59 HOH HOH . D 4 HOH A 52 217 63 HOH HOH . D 4 HOH A 53 218 66 HOH HOH . D 4 HOH A 54 219 69 HOH HOH . D 4 HOH A 55 220 70 HOH HOH . D 4 HOH A 56 221 71 HOH HOH . D 4 HOH A 57 222 73 HOH HOH . D 4 HOH A 58 223 75 HOH HOH . D 4 HOH A 59 224 78 HOH HOH . D 4 HOH A 60 225 79 HOH HOH . D 4 HOH A 61 226 83 HOH HOH . D 4 HOH A 62 227 84 HOH HOH . D 4 HOH A 63 228 85 HOH HOH . D 4 HOH A 64 229 86 HOH HOH . D 4 HOH A 65 230 87 HOH HOH . D 4 HOH A 66 231 88 HOH HOH . D 4 HOH A 67 232 89 HOH HOH . D 4 HOH A 68 233 90 HOH HOH . D 4 HOH A 69 234 91 HOH HOH . D 4 HOH A 70 235 92 HOH HOH . D 4 HOH A 71 236 93 HOH HOH . D 4 HOH A 72 237 94 HOH HOH . D 4 HOH A 73 238 95 HOH HOH . D 4 HOH A 74 239 96 HOH HOH . D 4 HOH A 75 240 97 HOH HOH . D 4 HOH A 76 241 98 HOH HOH . D 4 HOH A 77 242 99 HOH HOH . D 4 HOH A 78 243 100 HOH HOH . D 4 HOH A 79 244 101 HOH HOH . D 4 HOH A 80 245 102 HOH HOH . D 4 HOH A 81 246 103 HOH HOH . D 4 HOH A 82 247 104 HOH HOH . D 4 HOH A 83 248 105 HOH HOH . D 4 HOH A 84 249 106 HOH HOH . D 4 HOH A 85 250 107 HOH HOH . D 4 HOH A 86 251 108 HOH HOH . D 4 HOH A 87 252 109 HOH HOH . D 4 HOH A 88 253 110 HOH HOH . D 4 HOH A 89 254 111 HOH HOH . D 4 HOH A 90 255 112 HOH HOH . D 4 HOH A 91 256 113 HOH HOH . D 4 HOH A 92 257 114 HOH HOH . D 4 HOH A 93 258 115 HOH HOH . D 4 HOH A 94 259 116 HOH HOH . D 4 HOH A 95 260 117 HOH HOH . D 4 HOH A 96 261 118 HOH HOH . D 4 HOH A 97 262 119 HOH HOH . D 4 HOH A 98 263 120 HOH HOH . D 4 HOH A 99 264 121 HOH HOH . D 4 HOH A 100 265 122 HOH HOH . D 4 HOH A 101 266 123 HOH HOH . D 4 HOH A 102 267 124 HOH HOH . D 4 HOH A 103 268 125 HOH HOH . D 4 HOH A 104 269 126 HOH HOH . D 4 HOH A 105 270 127 HOH HOH . D 4 HOH A 106 271 128 HOH HOH . D 4 HOH A 107 272 129 HOH HOH . D 4 HOH A 108 273 130 HOH HOH . D 4 HOH A 109 274 131 HOH HOH . D 4 HOH A 110 275 132 HOH HOH . D 4 HOH A 111 276 133 HOH HOH . D 4 HOH A 112 277 134 HOH HOH . D 4 HOH A 113 278 135 HOH HOH . D 4 HOH A 114 279 136 HOH HOH . D 4 HOH A 115 280 137 HOH HOH . D 4 HOH A 116 281 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 4FI . . . C 3 38.924 -18.768 10.735 1 42.58 ? C1 4FI 165 A 1 HETATM 2 C C2 4FI . . . C 3 38.797 -16.441 11.342 1 44.16 ? C2 4FI 165 A 1 HETATM 3 C C3 4FI . . . C 3 39.26 -16.748 12.616 1 44.02 ? C3 4FI 165 A 1 HETATM 4 C C4 4FI . . . C 3 38.472 -14.992 10.974 1 43.55 ? C4 4FI 165 A 1 HETATM 5 C C5 4FI . . . C 3 39.506 -14.429 9.998 1 48.28 ? C5 4FI 165 A 1 HETATM 6 C C6 4FI . . . C 3 39.179 -12.965 9.696 1 50.94 ? C6 4FI 165 A 1 HETATM 7 N N7 4FI . . . C 3 39.478 -15.206 8.751 1 50.02 ? N7 4FI 165 A 1 HETATM 8 O O8 4FI . . . C 3 38.796 -12.631 8.576 1 46.25 ? O8 4FI 165 A 1 HETATM 9 O O9 4FI . . . C 3 39.297 -12.107 10.57 1 53.67 ? O9 4FI 165 A 1 HETATM 10 C C10 4FI . . . C 3 40.525 -15.916 8.339 1 50.72 ? C10 4FI 165 A 1 HETATM 11 C C11 4FI . . . C 3 38.629 -17.451 10.402 1 43.34 ? C11 4FI 165 A 1 HETATM 12 O O12 4FI . . . C 3 41.59 -15.988 8.949 1 57.31 ? O12 4FI 165 A 1 HETATM 13 C C13 4FI . . . C 3 40.32 -16.663 7.019 1 49.59 ? C13 4FI 165 A 1 HETATM 14 N N14 4FI . . . C 3 40.745 -17.888 6.749 1 50.97 ? N14 4FI 165 A 1 HETATM 15 N N15 4FI . . . C 3 40.421 -18.201 5.603 1 49.52 ? N15 4FI 165 A 1 HETATM 16 C C16 4FI . . . C 3 39.757 -17.177 5.057 1 48.72 ? C16 4FI 165 A 1 HETATM 17 C C17 4FI . . . C 3 39.69 -16.194 5.954 1 47.23 ? C17 4FI 165 A 1 HETATM 18 C C18 4FI . . . C 3 39.228 -17.144 3.772 1 44.32 ? C18 4FI 165 A 1 HETATM 19 C C19 4FI . . . C 3 38.936 -15.925 3.172 1 40.68 ? C19 4FI 165 A 1 HETATM 20 C C20 4FI . . . C 3 38.407 -15.891 1.887 1 43.22 ? C20 4FI 165 A 1 HETATM 21 C C21 4FI . . . C 3 38.169 -17.077 1.202 1 41.24 ? C21 4FI 165 A 1 HETATM 22 C C22 4FI . . . C 3 38.461 -18.297 1.802 1 41.45 ? C22 4FI 165 A 1 HETATM 23 C C23 4FI . . . C 3 38.99 -18.33 3.087 1 42.79 ? C23 4FI 165 A 1 HETATM 24 C C24 4FI . . . C 3 41.496 -18.752 7.687 1 45.59 ? C24 4FI 165 A 1 HETATM 25 C C25 4FI . . . C 3 39.388 -19.074 12.01 1 45.27 ? C25 4FI 165 A 1 HETATM 26 C C26 4FI . . . C 3 39.556 -18.064 12.95 1 45.69 ? C26 4FI 165 A 1 HETATM 27 C C27 4FI . . . C 3 40.019 -18.371 14.224 1 46.02 ? C27 4FI 165 A 1 HETATM 28 C C28 4FI . . . C 3 40.314 -19.688 14.558 1 44.71 ? C28 4FI 165 A 1 HETATM 29 C C29 4FI . . . C 3 40.146 -20.698 13.618 1 43.36 ? C29 4FI 165 A 1 HETATM 30 C C30 4FI . . . C 3 39.683 -20.391 12.344 1 45.71 ? C30 4FI 165 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #