data_3KB7
#
_model_server_result.job_id            aKcfxXdRQ1txkC2WlH84PQ 
_model_server_result.datetime_utc      '2024-11-14 17:26:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3kb7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":400}' 
#
_entry.id    3KB7 
#
_exptl.entry_id    3KB7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.087 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'L(+)-TARTARIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3KB7 
_cell.length_a            67.352 
_cell.length_b            67.352 
_cell.length_c            154.109 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3KB7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_645 y+1,x-1,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 101.028 -58.328543 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PRO 289 A PRO 323 1_555 A N NMM 290 A NMM 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale2 A C NMM 290 A NMM 324 1_555 A N PHE 291 A PHE 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.295 ? 
metalc ? metalc1 A NE2 HIS 59 A HIS 93 1_555 C ZN ZN . A ZN 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? 
metalc ? metalc2 A SG CYS 178 A CYS 212 1_555 C ZN ZN . A ZN 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? 
metalc ? metalc3 C ZN ZN . A ZN 346 1_555 D O1 TLA . A TLA 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? 
#
_chem_comp.formula           'C4 H6 O6' 
_chem_comp.formula_weight    150.087 
_chem_comp.id                TLA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'L(+)-TARTARIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 TLA doub 399 n n 
O11 C1 TLA sing 400 n n 
O11 H11 TLA sing 401 n n 
C1 C2 TLA sing 402 n n 
C2 O2 TLA sing 403 n n 
C2 C3 TLA sing 404 n n 
C2 H2 TLA sing 405 n n 
O2 HA TLA sing 406 n n 
C3 O3 TLA sing 407 n n 
C3 C4 TLA sing 408 n n 
C3 H3 TLA sing 409 n n 
O3 HB TLA sing 410 n n 
C4 O4 TLA doub 411 n n 
C4 O41 TLA sing 412 n n 
O41 H41 TLA sing 413 n n 
#
_atom_sites.entry_id                     3KB7 
_atom_sites.fract_transf_matrix[1][1]    0.014847 
_atom_sites.fract_transf_matrix[1][2]    0.008572 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017144 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006489 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 071 A 1 1 1 071 071 . 
C 3 ZN A 1 346 346 ZN ZN . 
D 4 TLA A 1 400 400 TLA TLA . 
E 5 HOH A 1 2 2 HOH HOH . 
E 5 HOH A 2 3 3 HOH HOH . 
E 5 HOH A 3 4 4 HOH HOH . 
E 5 HOH A 4 5 5 HOH HOH . 
E 5 HOH A 5 6 6 HOH HOH . 
E 5 HOH A 6 7 7 HOH HOH . 
E 5 HOH A 7 8 8 HOH HOH . 
E 5 HOH A 8 9 9 HOH HOH . 
E 5 HOH A 9 10 10 HOH HOH . 
E 5 HOH A 10 11 11 HOH HOH . 
E 5 HOH A 11 12 12 HOH HOH . 
E 5 HOH A 12 13 13 HOH HOH . 
E 5 HOH A 13 14 14 HOH HOH . 
E 5 HOH A 14 15 15 HOH HOH . 
E 5 HOH A 15 16 16 HOH HOH . 
E 5 HOH A 16 17 17 HOH HOH . 
E 5 HOH A 17 18 18 HOH HOH . 
E 5 HOH A 18 19 19 HOH HOH . 
E 5 HOH A 19 20 20 HOH HOH . 
E 5 HOH A 20 21 21 HOH HOH . 
E 5 HOH A 21 22 22 HOH HOH . 
E 5 HOH A 22 23 23 HOH HOH . 
E 5 HOH A 23 24 24 HOH HOH . 
E 5 HOH A 24 25 25 HOH HOH . 
E 5 HOH A 25 26 26 HOH HOH . 
E 5 HOH A 26 27 27 HOH HOH . 
E 5 HOH A 27 28 28 HOH HOH . 
E 5 HOH A 28 29 29 HOH HOH . 
E 5 HOH A 29 30 30 HOH HOH . 
E 5 HOH A 30 31 31 HOH HOH . 
E 5 HOH A 31 32 32 HOH HOH . 
E 5 HOH A 32 33 33 HOH HOH . 
E 5 HOH A 33 34 34 HOH HOH . 
E 5 HOH A 34 347 347 HOH HOH . 
E 5 HOH A 35 348 348 HOH HOH . 
E 5 HOH A 36 349 349 HOH HOH . 
E 5 HOH A 37 350 350 HOH HOH . 
E 5 HOH A 38 351 351 HOH HOH . 
E 5 HOH A 39 352 352 HOH HOH . 
E 5 HOH A 40 353 353 HOH HOH . 
E 5 HOH A 41 354 354 HOH HOH . 
E 5 HOH A 42 355 355 HOH HOH . 
E 5 HOH A 43 356 356 HOH HOH . 
E 5 HOH A 44 357 357 HOH HOH . 
E 5 HOH A 45 358 358 HOH HOH . 
E 5 HOH A 46 359 359 HOH HOH . 
E 5 HOH A 47 360 360 HOH HOH . 
E 5 HOH A 48 361 361 HOH HOH . 
E 5 HOH A 49 362 362 HOH HOH . 
E 5 HOH A 50 363 363 HOH HOH . 
E 5 HOH A 51 364 364 HOH HOH . 
E 5 HOH A 52 365 365 HOH HOH . 
E 5 HOH A 53 366 366 HOH HOH . 
E 5 HOH A 54 367 367 HOH HOH . 
E 5 HOH A 55 368 368 HOH HOH . 
E 5 HOH A 56 369 369 HOH HOH . 
E 5 HOH A 57 370 370 HOH HOH . 
E 5 HOH A 58 371 371 HOH HOH . 
E 5 HOH A 59 372 372 HOH HOH . 
E 5 HOH A 60 373 373 HOH HOH . 
E 5 HOH A 61 374 374 HOH HOH . 
E 5 HOH A 62 375 375 HOH HOH . 
E 5 HOH A 63 376 376 HOH HOH . 
E 5 HOH A 64 377 377 HOH HOH . 
E 5 HOH A 65 378 378 HOH HOH . 
E 5 HOH A 66 379 379 HOH HOH . 
E 5 HOH A 67 380 380 HOH HOH . 
E 5 HOH A 68 381 381 HOH HOH . 
E 5 HOH A 69 382 382 HOH HOH . 
E 5 HOH A 70 383 383 HOH HOH . 
E 5 HOH A 71 384 384 HOH HOH . 
E 5 HOH A 72 385 385 HOH HOH . 
E 5 HOH A 73 386 386 HOH HOH . 
E 5 HOH A 74 387 387 HOH HOH . 
E 5 HOH A 75 388 388 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 TLA . . . D 4 42.45 -27.448 -4.938 1 44.88 ? O1 TLA 400 A 1 
HETATM 2 O O11 TLA . . . D 4 42.996 -25.371 -4.546 1 43.6 ? O11 TLA 400 A 1 
HETATM 3 C C1 TLA . . . D 4 43.159 -26.438 -5.169 1 45.84 ? C1 TLA 400 A 1 
HETATM 4 C C2 TLA . . . D 4 44.228 -26.512 -6.234 1 47.15 ? C2 TLA 400 A 1 
HETATM 5 O O2 TLA . . . D 4 45.524 -26.286 -5.662 1 47.08 ? O2 TLA 400 A 1 
HETATM 6 C C3 TLA . . . D 4 43.967 -25.487 -7.341 1 48.57 ? C3 TLA 400 A 1 
HETATM 7 O O3 TLA . . . D 4 44.164 -24.185 -6.78 1 49.64 ? O3 TLA 400 A 1 
HETATM 8 C C4 TLA . . . D 4 44.899 -25.629 -8.513 1 49.44 ? C4 TLA 400 A 1 
HETATM 9 O O4 TLA . . . D 4 45.541 -26.69 -8.69 1 49.88 ? O4 TLA 400 A 1 
HETATM 10 O O41 TLA . . . D 4 45.013 -24.644 -9.278 1 50.59 ? O41 TLA 400 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#