data_3KCE # _model_server_result.job_id b5PBKssdooMN70vl7ghBiQ _model_server_result.datetime_utc '2024-11-15 05:38:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kce # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":164}' # _entry.id 3KCE # _exptl.entry_id 3KCE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 546.646 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DODECAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3KCE _cell.length_a 68.354 _cell.length_b 68.354 _cell.length_c 79.849 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KCE _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H50 O13' _chem_comp.formula_weight 546.646 _chem_comp.id 12P _chem_comp.mon_nstd_flag . _chem_comp.name 'DODECAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O37 C36 12P sing 1 n n O37 H37 12P sing 2 n n C36 C35 12P sing 3 n n C36 H361 12P sing 4 n n C36 H362 12P sing 5 n n C35 O34 12P sing 6 n n C35 H351 12P sing 7 n n C35 H352 12P sing 8 n n O34 C33 12P sing 9 n n C33 C32 12P sing 10 n n C33 H331 12P sing 11 n n C33 H332 12P sing 12 n n C32 O31 12P sing 13 n n C32 H321 12P sing 14 n n C32 H322 12P sing 15 n n O31 C30 12P sing 16 n n C30 C29 12P sing 17 n n C30 H301 12P sing 18 n n C30 H302 12P sing 19 n n C29 O28 12P sing 20 n n C29 H291 12P sing 21 n n C29 H292 12P sing 22 n n O28 C27 12P sing 23 n n C27 C26 12P sing 24 n n C27 H271 12P sing 25 n n C27 H272 12P sing 26 n n C26 O25 12P sing 27 n n C26 H261 12P sing 28 n n C26 H262 12P sing 29 n n O25 C24 12P sing 30 n n C24 C23 12P sing 31 n n C24 H241 12P sing 32 n n C24 H242 12P sing 33 n n C23 O22 12P sing 34 n n C23 H231 12P sing 35 n n C23 H232 12P sing 36 n n O22 C21 12P sing 37 n n C21 C20 12P sing 38 n n C21 H211 12P sing 39 n n C21 H212 12P sing 40 n n C20 O19 12P sing 41 n n C20 H201 12P sing 42 n n C20 H202 12P sing 43 n n O19 C18 12P sing 44 n n C18 C17 12P sing 45 n n C18 H181 12P sing 46 n n C18 H182 12P sing 47 n n C17 O16 12P sing 48 n n C17 H171 12P sing 49 n n C17 H172 12P sing 50 n n O16 C15 12P sing 51 n n C15 C14 12P sing 52 n n C15 H151 12P sing 53 n n C15 H152 12P sing 54 n n C14 O13 12P sing 55 n n C14 H141 12P sing 56 n n C14 H142 12P sing 57 n n O13 C12 12P sing 58 n n C12 C11 12P sing 59 n n C12 H121 12P sing 60 n n C12 H122 12P sing 61 n n C11 O10 12P sing 62 n n C11 H111 12P sing 63 n n C11 H112 12P sing 64 n n O10 C9 12P sing 65 n n C9 C8 12P sing 66 n n C9 H91 12P sing 67 n n C9 H92 12P sing 68 n n C8 O7 12P sing 69 n n C8 H81 12P sing 70 n n C8 H82 12P sing 71 n n O7 C6 12P sing 72 n n C6 C5 12P sing 73 n n C6 H61 12P sing 74 n n C6 H62 12P sing 75 n n C5 O4 12P sing 76 n n C5 H51 12P sing 77 n n C5 H52 12P sing 78 n n O4 C3 12P sing 79 n n C3 C2 12P sing 80 n n C3 H31 12P sing 81 n n C3 H32 12P sing 82 n n C2 O1 12P sing 83 n n C2 H21 12P sing 84 n n C2 H22 12P sing 85 n n O1 HO1 12P sing 86 n n # _atom_sites.entry_id 3KCE _atom_sites.fract_transf_matrix[1][1] 0.01463 _atom_sites.fract_transf_matrix[1][2] 0.008446 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016893 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012524 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 12P A 1 164 1 12P 12P . C 3 4BY A 1 165 1 4BY 4BG . D 4 HOH A 1 166 1 HOH HOH . D 4 HOH A 2 167 2 HOH HOH . D 4 HOH A 3 168 3 HOH HOH . D 4 HOH A 4 169 4 HOH HOH . D 4 HOH A 5 170 5 HOH HOH . D 4 HOH A 6 171 6 HOH HOH . D 4 HOH A 7 172 7 HOH HOH . D 4 HOH A 8 173 8 HOH HOH . D 4 HOH A 9 174 9 HOH HOH . D 4 HOH A 10 175 10 HOH HOH . D 4 HOH A 11 176 11 HOH HOH . D 4 HOH A 12 177 12 HOH HOH . D 4 HOH A 13 178 13 HOH HOH . D 4 HOH A 14 179 14 HOH HOH . D 4 HOH A 15 180 15 HOH HOH . D 4 HOH A 16 181 16 HOH HOH . D 4 HOH A 17 182 17 HOH HOH . D 4 HOH A 18 183 18 HOH HOH . D 4 HOH A 19 184 19 HOH HOH . D 4 HOH A 20 185 20 HOH HOH . D 4 HOH A 21 186 21 HOH HOH . D 4 HOH A 22 187 22 HOH HOH . D 4 HOH A 23 188 23 HOH HOH . D 4 HOH A 24 189 24 HOH HOH . D 4 HOH A 25 190 25 HOH HOH . D 4 HOH A 26 191 26 HOH HOH . D 4 HOH A 27 192 27 HOH HOH . D 4 HOH A 28 193 28 HOH HOH . D 4 HOH A 29 194 29 HOH HOH . D 4 HOH A 30 195 30 HOH HOH . D 4 HOH A 31 196 31 HOH HOH . D 4 HOH A 32 197 32 HOH HOH . D 4 HOH A 33 198 33 HOH HOH . D 4 HOH A 34 199 34 HOH HOH . D 4 HOH A 35 200 35 HOH HOH . D 4 HOH A 36 201 36 HOH HOH . D 4 HOH A 37 202 37 HOH HOH . D 4 HOH A 38 203 38 HOH HOH . D 4 HOH A 39 204 39 HOH HOH . D 4 HOH A 40 205 40 HOH HOH . D 4 HOH A 41 206 41 HOH HOH . D 4 HOH A 42 207 42 HOH HOH . D 4 HOH A 43 208 43 HOH HOH . D 4 HOH A 44 209 44 HOH HOH . D 4 HOH A 45 210 45 HOH HOH . D 4 HOH A 46 211 46 HOH HOH . D 4 HOH A 47 212 47 HOH HOH . D 4 HOH A 48 213 48 HOH HOH . D 4 HOH A 49 214 49 HOH HOH . D 4 HOH A 50 215 50 HOH HOH . D 4 HOH A 51 216 51 HOH HOH . D 4 HOH A 52 217 52 HOH HOH . D 4 HOH A 53 218 53 HOH HOH . D 4 HOH A 54 219 54 HOH HOH . D 4 HOH A 55 220 55 HOH HOH . D 4 HOH A 56 221 56 HOH HOH . D 4 HOH A 57 222 57 HOH HOH . D 4 HOH A 58 223 58 HOH HOH . D 4 HOH A 59 224 59 HOH HOH . D 4 HOH A 60 225 60 HOH HOH . D 4 HOH A 61 226 61 HOH HOH . D 4 HOH A 62 227 62 HOH HOH . D 4 HOH A 63 228 63 HOH HOH . D 4 HOH A 64 229 64 HOH HOH . D 4 HOH A 65 230 65 HOH HOH . D 4 HOH A 66 231 66 HOH HOH . D 4 HOH A 67 232 67 HOH HOH . D 4 HOH A 68 233 68 HOH HOH . D 4 HOH A 69 234 69 HOH HOH . D 4 HOH A 70 235 70 HOH HOH . D 4 HOH A 71 236 71 HOH HOH . D 4 HOH A 72 237 72 HOH HOH . D 4 HOH A 73 238 73 HOH HOH . D 4 HOH A 74 239 74 HOH HOH . D 4 HOH A 75 240 75 HOH HOH . D 4 HOH A 76 241 76 HOH HOH . D 4 HOH A 77 242 77 HOH HOH . D 4 HOH A 78 243 78 HOH HOH . D 4 HOH A 79 244 79 HOH HOH . D 4 HOH A 80 245 80 HOH HOH . D 4 HOH A 81 246 81 HOH HOH . D 4 HOH A 82 247 82 HOH HOH . D 4 HOH A 83 248 83 HOH HOH . D 4 HOH A 84 249 84 HOH HOH . D 4 HOH A 85 250 85 HOH HOH . D 4 HOH A 86 251 86 HOH HOH . D 4 HOH A 87 252 87 HOH HOH . D 4 HOH A 88 253 88 HOH HOH . D 4 HOH A 89 254 89 HOH HOH . D 4 HOH A 90 255 90 HOH HOH . D 4 HOH A 91 256 91 HOH HOH . D 4 HOH A 92 257 92 HOH HOH . D 4 HOH A 93 258 93 HOH HOH . D 4 HOH A 94 259 94 HOH HOH . D 4 HOH A 95 260 95 HOH HOH . D 4 HOH A 96 261 96 HOH HOH . D 4 HOH A 97 262 97 HOH HOH . D 4 HOH A 98 263 98 HOH HOH . D 4 HOH A 99 264 99 HOH HOH . D 4 HOH A 100 265 100 HOH HOH . D 4 HOH A 101 266 101 HOH HOH . D 4 HOH A 102 267 102 HOH HOH . D 4 HOH A 103 268 103 HOH HOH . D 4 HOH A 104 269 104 HOH HOH . D 4 HOH A 105 270 105 HOH HOH . D 4 HOH A 106 271 106 HOH HOH . D 4 HOH A 107 272 107 HOH HOH . D 4 HOH A 108 273 108 HOH HOH . D 4 HOH A 109 274 109 HOH HOH . D 4 HOH A 110 275 110 HOH HOH . D 4 HOH A 111 276 111 HOH HOH . D 4 HOH A 112 277 112 HOH HOH . D 4 HOH A 113 278 113 HOH HOH . D 4 HOH A 114 279 114 HOH HOH . D 4 HOH A 115 280 115 HOH HOH . D 4 HOH A 116 281 116 HOH HOH . D 4 HOH A 117 282 117 HOH HOH . D 4 HOH A 118 283 118 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C36 12P . . . B 2 -13.792 33.459 23.435 1 44.01 ? C36 12P 164 A 1 HETATM 2 C C35 12P . . . B 2 -14.766 32.785 24.435 1 42.71 ? C35 12P 164 A 1 HETATM 3 O O34 12P . . . B 2 -14.277 31.573 25.046 1 41.97 ? O34 12P 164 A 1 HETATM 4 C C33 12P . . . B 2 -15.394 30.613 25.404 1 39.24 ? C33 12P 164 A 1 HETATM 5 C C32 12P . . . B 2 -15.721 29.802 24.139 1 33.32 ? C32 12P 164 A 1 HETATM 6 O O31 12P . . . B 2 -16.619 28.696 24.157 1 34.58 ? O31 12P 164 A 1 HETATM 7 C C30 12P . . . B 2 -16.514 27.843 22.961 1 31.33 ? C30 12P 164 A 1 HETATM 8 C C29 12P . . . B 2 -16.867 28.629 21.76 1 27.49 ? C29 12P 164 A 1 HETATM 9 O O28 12P . . . B 2 -16.592 27.88 20.566 1 32.21 ? O28 12P 164 A 1 HETATM 10 C C27 12P . . . B 2 -16.9 28.647 19.327 1 28.33 ? C27 12P 164 A 1 HETATM 11 C C26 12P . . . B 2 -16.604 30.09 19.533 1 22.78 ? C26 12P 164 A 1 HETATM 12 O O25 12P . . . B 2 -16.859 30.907 18.371 1 30.9 ? O25 12P 164 A 1 HETATM 13 C C24 12P . . . B 2 -16.419 32.236 18.677 1 26.51 ? C24 12P 164 A 1 HETATM 14 C C23 12P . . . B 2 -14.931 32.153 18.688 1 21.09 ? C23 12P 164 A 1 HETATM 15 O O22 12P . . . B 2 -14.379 33.457 18.919 1 28.88 ? O22 12P 164 A 1 HETATM 16 C C21 12P . . . B 2 -12.985 33.324 19.434 1 24.6 ? C21 12P 164 A 1 HETATM 17 C C20 12P . . . B 2 -12.279 32.654 18.29 1 19.53 ? C20 12P 164 A 1 HETATM 18 O O19 12P . . . B 2 -10.826 32.407 18.405 1 29.87 ? O19 12P 164 A 1 HETATM 19 C C18 12P . . . B 2 -10.322 31.783 17.142 1 25.48 ? C18 12P 164 A 1 HETATM 20 C C17 12P . . . B 2 -10.64 30.338 17.068 1 20.27 ? C17 12P 164 A 1 HETATM 21 O O16 12P . . . B 2 -10.163 29.701 15.772 1 34.99 ? O16 12P 164 A 1 HETATM 22 C C15 12P . . . B 2 -10.594 28.301 15.61 1 36.36 ? C15 12P 164 A 1 HETATM 23 C C14 12P . . . B 2 -11.981 28.278 14.906 1 39.48 ? C14 12P 164 A 1 HETATM 24 O O13 12P . . . B 2 -12.613 27.019 14.393 1 44.1 ? O13 12P 164 A 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 24 #