data_3KCY # _model_server_result.job_id L7t9eiIiLkj5sBETWbpZ7Q _model_server_result.datetime_utc '2025-01-25 11:27:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kcy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1353}' # _entry.id 3KCY # _exptl.entry_id 3KCY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KCY _cell.length_a 86.912 _cell.length_b 86.912 _cell.length_c 144.559 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KCY _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_465 y-1,x+1,-z 0 1 0 1 0 0 0 0 -1 -86.912 86.912 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 E OAA HQY . A HQY 1 1_555 B FE FE2 . A FE2 1350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? metalc ? metalc2 E NAH HQY . A HQY 1 1_555 B FE FE2 . A FE2 1350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc3 A NE2 HIS 185 A HIS 199 1_555 B FE FE2 . A FE2 1350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc4 A OD2 ASP 187 A ASP 201 1_555 B FE FE2 . A FE2 1350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc5 A NE2 HIS 265 A HIS 279 1_555 B FE FE2 . A FE2 1350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 309 n n S O2 SO4 doub 310 n n S O3 SO4 sing 311 n n S O4 SO4 sing 312 n n # _atom_sites.entry_id 3KCY _atom_sites.fract_transf_matrix[1][1] 0.011506 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011506 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006918 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE2 A 1 1350 1350 FE2 FE2 . C 3 SO4 A 1 1352 1352 SO4 SO4 . D 3 SO4 A 1 1353 1353 SO4 SO4 . E 4 HQY A 1 1 1 HQY HYQ . F 5 HOH A 1 2 2 HOH HOH . F 5 HOH A 2 3 3 HOH HOH . F 5 HOH A 3 4 4 HOH HOH . F 5 HOH A 4 5 5 HOH HOH . F 5 HOH A 5 6 6 HOH HOH . F 5 HOH A 6 7 7 HOH HOH . F 5 HOH A 7 8 8 HOH HOH . F 5 HOH A 8 9 9 HOH HOH . F 5 HOH A 9 10 10 HOH HOH . F 5 HOH A 10 11 11 HOH HOH . F 5 HOH A 11 12 12 HOH HOH . F 5 HOH A 12 13 13 HOH HOH . F 5 HOH A 13 14 14 HOH HOH . F 5 HOH A 14 350 1 HOH HOH . F 5 HOH A 15 351 15 HOH HOH . F 5 HOH A 16 352 16 HOH HOH . F 5 HOH A 17 353 17 HOH HOH . F 5 HOH A 18 354 18 HOH HOH . F 5 HOH A 19 355 19 HOH HOH . F 5 HOH A 20 356 20 HOH HOH . F 5 HOH A 21 357 21 HOH HOH . F 5 HOH A 22 358 22 HOH HOH . F 5 HOH A 23 359 23 HOH HOH . F 5 HOH A 24 360 24 HOH HOH . F 5 HOH A 25 361 25 HOH HOH . F 5 HOH A 26 362 26 HOH HOH . F 5 HOH A 27 363 27 HOH HOH . F 5 HOH A 28 364 28 HOH HOH . F 5 HOH A 29 365 29 HOH HOH . F 5 HOH A 30 366 30 HOH HOH . F 5 HOH A 31 367 31 HOH HOH . F 5 HOH A 32 368 32 HOH HOH . F 5 HOH A 33 369 33 HOH HOH . F 5 HOH A 34 370 34 HOH HOH . F 5 HOH A 35 371 35 HOH HOH . F 5 HOH A 36 372 36 HOH HOH . F 5 HOH A 37 373 37 HOH HOH . F 5 HOH A 38 374 38 HOH HOH . F 5 HOH A 39 375 39 HOH HOH . F 5 HOH A 40 376 40 HOH HOH . F 5 HOH A 41 377 41 HOH HOH . F 5 HOH A 42 378 42 HOH HOH . F 5 HOH A 43 379 43 HOH HOH . F 5 HOH A 44 380 44 HOH HOH . F 5 HOH A 45 381 45 HOH HOH . F 5 HOH A 46 382 46 HOH HOH . F 5 HOH A 47 383 47 HOH HOH . F 5 HOH A 48 384 48 HOH HOH . F 5 HOH A 49 385 49 HOH HOH . F 5 HOH A 50 386 50 HOH HOH . F 5 HOH A 51 387 51 HOH HOH . F 5 HOH A 52 388 52 HOH HOH . F 5 HOH A 53 389 53 HOH HOH . F 5 HOH A 54 390 54 HOH HOH . F 5 HOH A 55 391 55 HOH HOH . F 5 HOH A 56 392 56 HOH HOH . F 5 HOH A 57 393 57 HOH HOH . F 5 HOH A 58 394 58 HOH HOH . F 5 HOH A 59 395 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 -35.184 30.176 -1.494 1 110.14 ? S SO4 1353 A 1 HETATM 2 O O1 SO4 . . . D 3 -36.292 29.614 -2.256 1 110.48 ? O1 SO4 1353 A 1 HETATM 3 O O2 SO4 . . . D 3 -34.152 29.15 -1.321 1 109.46 ? O2 SO4 1353 A 1 HETATM 4 O O3 SO4 . . . D 3 -34.634 31.312 -2.24 1 109.24 ? O3 SO4 1353 A 1 HETATM 5 O O4 SO4 . . . D 3 -35.682 30.599 -0.183 1 109.37 ? O4 SO4 1353 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 5 #