data_3KDT # _model_server_result.job_id QRsOZ-lEjOU1WDISC4ldUw _model_server_result.datetime_utc '2024-12-22 04:16:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kdt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 3KDT # _exptl.entry_id 3KDT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 444.865 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-{[2-(4-chlorophenyl)-5-methyl-1,3-oxazol-4-yl]methoxy}benzyl)-N-(methoxycarbonyl)glycine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KDT _cell.length_a 64.754 _cell.length_b 64.754 _cell.length_c 123.664 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KDT _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,C,E 2 1 B,D 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C22 H21 Cl N2 O6' _chem_comp.formula_weight 444.865 _chem_comp.id 7HA _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-{[2-(4-chlorophenyl)-5-methyl-1,3-oxazol-4-yl]methoxy}benzyl)-N-(methoxycarbonyl)glycine _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 7HA sing 1 n n C1 H1 7HA sing 2 n n C1 H1A 7HA sing 3 n n C1 H1B 7HA sing 4 n n O6 C2 7HA sing 5 n y C2 C3 7HA doub 6 n y N4 C3 7HA sing 7 n y C3 C14 7HA sing 8 n n C5 N4 7HA doub 9 n y C7 C5 7HA sing 10 n y C5 O6 7HA sing 11 n y C8 C7 7HA doub 12 n y C12 C7 7HA sing 13 n y C9 C8 7HA sing 14 n y C8 H8 7HA sing 15 n n C10 C9 7HA doub 16 n y C9 H9 7HA sing 17 n n CL13 C10 7HA sing 18 n n C10 C11 7HA sing 19 n y C11 C12 7HA doub 20 n y C11 H11 7HA sing 21 n n C12 H12 7HA sing 22 n n C14 O15 7HA sing 23 n n C14 H14 7HA sing 24 n n C14 H14A 7HA sing 25 n n O15 C16 7HA sing 26 n n C16 C21 7HA doub 27 n y C16 C17 7HA sing 28 n y C17 C18 7HA doub 29 n y C17 H17 7HA sing 30 n n C18 C19 7HA sing 31 n y C18 H18 7HA sing 32 n n C20 C19 7HA doub 33 n y C19 H19 7HA sing 34 n n C21 C20 7HA sing 35 n y C20 C22 7HA sing 36 n n C21 H21 7HA sing 37 n n N23 C22 7HA sing 38 n n C22 H22 7HA sing 39 n n C22 H22A 7HA sing 40 n n C24 N23 7HA sing 41 n n C28 N23 7HA sing 42 n n C24 C25 7HA sing 43 n n C24 H24 7HA sing 44 n n C24 H24A 7HA sing 45 n n O26 C25 7HA doub 46 n n C25 O27 7HA sing 47 n n O27 HO27 7HA sing 48 n n O30 C28 7HA sing 49 n n C28 O29 7HA doub 50 n n C31 O30 7HA sing 51 n n C31 H31 7HA sing 52 n n C31 H31A 7HA sing 53 n n C31 H31B 7HA sing 54 n n # _atom_sites.entry_id 3KDT _atom_sites.fract_transf_matrix[1][1] 0.015443 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015443 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008086 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 7HA A 1 501 501 7HA 7HA . D 2 7HA B 1 501 501 7HA 7HA . E 3 HOH A 1 1 1 HOH HOH . E 3 HOH A 2 2 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 7HA . . . C 2 0.775 17.14 -8.104 1 61.88 ? C1 7HA 501 A 1 HETATM 2 C C2 7HA . . . C 2 1.937 17.245 -9.065 1 61.17 ? C2 7HA 501 A 1 HETATM 3 C C3 7HA . . . C 2 3.211 16.664 -8.957 1 60.52 ? C3 7HA 501 A 1 HETATM 4 N N4 7HA . . . C 2 3.894 17.049 -10.043 1 61.53 ? N4 7HA 501 A 1 HETATM 5 C C5 7HA . . . C 2 3.06 17.814 -10.778 1 63.79 ? C5 7HA 501 A 1 HETATM 6 O O6 7HA . . . C 2 1.92 17.916 -10.167 1 61.99 ? O6 7HA 501 A 1 HETATM 7 C C7 7HA . . . C 2 3.488 18.462 -12.052 1 63.64 ? C7 7HA 501 A 1 HETATM 8 C C8 7HA . . . C 2 2.621 18.841 -13.083 1 64.44 ? C8 7HA 501 A 1 HETATM 9 C C9 7HA . . . C 2 3.152 19.466 -14.212 1 64.51 ? C9 7HA 501 A 1 HETATM 10 C C10 7HA . . . C 2 4.53 19.72 -14.287 1 65.27 ? C10 7HA 501 A 1 HETATM 11 C C11 7HA . . . C 2 5.384 19.356 -13.252 1 65.04 ? C11 7HA 501 A 1 HETATM 12 C C12 7HA . . . C 2 4.853 18.737 -12.139 1 64.85 ? C12 7HA 501 A 1 HETATM 13 CL CL13 7HA . . . C 2 5.27 20.497 -15.656 1 65.8 ? CL13 7HA 501 A 1 HETATM 14 C C14 7HA . . . C 2 3.769 15.774 -7.876 1 59.15 ? C14 7HA 501 A 1 HETATM 15 O O15 7HA . . . C 2 2.681 15.11 -7.199 1 54.63 ? O15 7HA 501 A 1 HETATM 16 C C16 7HA . . . C 2 2.793 13.97 -6.535 1 54.17 ? C16 7HA 501 A 1 HETATM 17 C C17 7HA . . . C 2 4.026 13.609 -5.981 1 52.19 ? C17 7HA 501 A 1 HETATM 18 C C18 7HA . . . C 2 4.124 12.411 -5.298 1 51.23 ? C18 7HA 501 A 1 HETATM 19 C C19 7HA . . . C 2 3.021 11.581 -5.152 1 51.93 ? C19 7HA 501 A 1 HETATM 20 C C20 7HA . . . C 2 1.79 11.943 -5.683 1 51.81 ? C20 7HA 501 A 1 HETATM 21 C C21 7HA . . . C 2 1.685 13.137 -6.385 1 52.27 ? C21 7HA 501 A 1 HETATM 22 C C22 7HA . . . C 2 0.628 11.005 -5.524 1 51.76 ? C22 7HA 501 A 1 HETATM 23 N N23 7HA . . . C 2 0.271 10.568 -6.869 1 51.82 ? N23 7HA 501 A 1 HETATM 24 C C24 7HA . . . C 2 1.158 9.717 -7.668 1 50.8 ? C24 7HA 501 A 1 HETATM 25 C C25 7HA . . . C 2 0.905 8.253 -7.41 1 49.67 ? C25 7HA 501 A 1 HETATM 26 O O26 7HA . . . C 2 1.8 7.46 -7.635 1 49.94 ? O26 7HA 501 A 1 HETATM 27 O O27 7HA . . . C 2 -0.267 7.829 -6.951 1 48.75 ? O27 7HA 501 A 1 HETATM 28 C C28 7HA . . . C 2 -0.867 11.004 -7.407 1 52.27 ? C28 7HA 501 A 1 HETATM 29 O O29 7HA . . . C 2 -1.647 11.652 -6.733 1 52.68 ? O29 7HA 501 A 1 HETATM 30 O O30 7HA . . . C 2 -1.136 10.741 -8.681 1 53 ? O30 7HA 501 A 1 HETATM 31 C C31 7HA . . . C 2 -2.069 9.679 -9.022 1 53.79 ? C31 7HA 501 A 1 # _model_server_stats.io_time_ms 122 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #