data_3KE2 # _model_server_result.job_id 3InSQqjKieTR8lRsFQQAeA _model_server_result.datetime_utc '2024-10-28 11:26:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ke2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":117}' # _entry.id 3KE2 # _exptl.entry_id 3KE2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KE2 _cell.length_a 66.479 _cell.length_b 100.509 _cell.length_c 114.583 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KE2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,D,E,I,J 1 1 C,F,G,H,K 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 57.2915 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 28 A LEU 27 1_555 A N MSE 29 A MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C MSE 29 A MSE 28 1_555 A N ASP 30 A ASP 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale3 A C GLY 44 A GLY 43 1_555 A N MSE 45 A MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale4 A C MSE 45 A MSE 44 1_555 A N PRO 46 A PRO 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale5 A C TRP 90 A TRP 89 1_555 A N MSE 91 A MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale6 A C MSE 91 A MSE 90 1_555 A N ASP 92 A ASP 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale7 B C LEU 28 B LEU 27 1_555 B N MSE 29 B MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale8 B C MSE 29 B MSE 28 1_555 B N ASP 30 B ASP 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale9 B C GLY 44 B GLY 43 1_555 B N MSE 45 B MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale10 B C MSE 45 B MSE 44 1_555 B N PRO 46 B PRO 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale11 B C TRP 90 B TRP 89 1_555 B N MSE 91 B MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale12 B C MSE 91 B MSE 90 1_555 B N ASP 92 B ASP 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale13 C C LEU 28 C LEU 27 1_555 C N MSE 29 C MSE 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 C C MSE 29 C MSE 28 1_555 C N ASP 30 C ASP 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale15 C C GLY 44 C GLY 43 1_555 C N MSE 45 C MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale16 C C MSE 45 C MSE 44 1_555 C N PRO 46 C PRO 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? covale ? covale17 C C TRP 90 C TRP 89 1_555 C N MSE 91 C MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale18 C C MSE 91 C MSE 90 1_555 C N ASP 92 C ASP 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3KE2 _atom_sites.fract_transf_matrix[1][1] 0.015042 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009949 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008727 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 NO3 A 1 117 1 NO3 NO3 . E 2 NO3 B 1 117 3 NO3 NO3 . F 2 NO3 C 1 117 2 NO3 NO3 . G 3 EDO C 1 118 4 EDO EDO . H 3 EDO C 1 119 5 EDO EDO . I 4 HOH A 1 118 11 HOH HOH . I 4 HOH A 2 119 12 HOH HOH . I 4 HOH A 3 120 13 HOH HOH . I 4 HOH A 4 121 14 HOH HOH . I 4 HOH A 5 122 15 HOH HOH . I 4 HOH A 6 123 16 HOH HOH . I 4 HOH A 7 124 17 HOH HOH . I 4 HOH A 8 125 18 HOH HOH . I 4 HOH A 9 126 19 HOH HOH . I 4 HOH A 10 127 35 HOH HOH . I 4 HOH A 11 128 36 HOH HOH . I 4 HOH A 12 129 37 HOH HOH . I 4 HOH A 13 130 38 HOH HOH . I 4 HOH A 14 131 39 HOH HOH . I 4 HOH A 15 132 40 HOH HOH . I 4 HOH A 16 133 41 HOH HOH . I 4 HOH A 17 134 42 HOH HOH . I 4 HOH A 18 135 43 HOH HOH . I 4 HOH A 19 136 53 HOH HOH . I 4 HOH A 20 137 57 HOH HOH . I 4 HOH A 21 138 58 HOH HOH . I 4 HOH A 22 139 59 HOH HOH . I 4 HOH A 23 140 60 HOH HOH . J 4 HOH B 1 118 7 HOH HOH . J 4 HOH B 2 119 20 HOH HOH . J 4 HOH B 3 120 21 HOH HOH . J 4 HOH B 4 121 22 HOH HOH . J 4 HOH B 5 122 23 HOH HOH . J 4 HOH B 6 123 24 HOH HOH . J 4 HOH B 7 124 25 HOH HOH . J 4 HOH B 8 125 26 HOH HOH . J 4 HOH B 9 126 27 HOH HOH . J 4 HOH B 10 127 28 HOH HOH . J 4 HOH B 11 128 29 HOH HOH . J 4 HOH B 12 129 30 HOH HOH . J 4 HOH B 13 130 44 HOH HOH . J 4 HOH B 14 131 45 HOH HOH . J 4 HOH B 15 132 46 HOH HOH . J 4 HOH B 16 133 47 HOH HOH . J 4 HOH B 17 134 48 HOH HOH . J 4 HOH B 18 135 54 HOH HOH . J 4 HOH B 19 136 56 HOH HOH . K 4 HOH C 1 120 6 HOH HOH . K 4 HOH C 2 121 8 HOH HOH . K 4 HOH C 3 122 9 HOH HOH . K 4 HOH C 4 123 10 HOH HOH . K 4 HOH C 5 124 31 HOH HOH . K 4 HOH C 6 125 32 HOH HOH . K 4 HOH C 7 126 33 HOH HOH . K 4 HOH C 8 127 34 HOH HOH . K 4 HOH C 9 128 49 HOH HOH . K 4 HOH C 10 129 50 HOH HOH . K 4 HOH C 11 130 51 HOH HOH . K 4 HOH C 12 131 52 HOH HOH . K 4 HOH C 13 132 55 HOH HOH . K 4 HOH C 14 133 61 HOH HOH . K 4 HOH C 15 134 62 HOH HOH . K 4 HOH C 16 135 63 HOH HOH . K 4 HOH C 17 136 64 HOH HOH . K 4 HOH C 18 137 65 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . E 2 38.609 7.554 44.352 1 53.13 ? N NO3 117 B 1 HETATM 2 O O1 NO3 . . . E 2 38.897 7.03 45.648 1 52.36 ? O1 NO3 117 B 1 HETATM 3 O O2 NO3 . . . E 2 37.98 8.81 44.179 1 52.74 ? O2 NO3 117 B 1 HETATM 4 O O3 NO3 . . . E 2 38.968 6.831 43.199 1 53.22 ? O3 NO3 117 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #