data_3KET # _model_server_result.job_id X4eOEzTZ2jvSsCZ6in1u4A _model_server_result.datetime_utc '2025-03-27 06:00:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ket # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":214}' # _entry.id 3KET # _exptl.entry_id 3KET _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KET _cell.length_a 48.72 _cell.length_b 107.03 _cell.length_c 153.95 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KET _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog WATSON-CRICK hydrog1 B N1 DA 2 B DA 2 1_555 C N3 DT 10 C DT 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N6 DA 2 B DA 2 1_555 C O4 DT 10 C DT 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B N3 DT 3 B DT 3 1_555 C N1 DA 9 C DA 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B O4 DT 3 B DT 3 1_555 C N6 DA 9 C DA 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N3 DT 4 B DT 4 1_555 C N1 DA 8 C DA 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B O4 DT 4 B DT 4 1_555 C N6 DA 8 C DA 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B N1 DG 5 B DG 5 1_555 C N3 DC 7 C DC 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N2 DG 5 B DG 5 1_555 C O2 DC 7 C DC 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B O6 DG 5 B DG 5 1_555 C N4 DC 7 C DC 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N3 DT 6 B DT 6 1_555 C N1 DA 6 C DA 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B O4 DT 6 B DT 6 1_555 C N6 DA 6 C DA 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N1 DG 7 B DG 7 1_555 C N3 DC 5 C DC 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N2 DG 7 B DG 7 1_555 C O2 DC 5 C DC 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B O6 DG 7 B DG 7 1_555 C N4 DC 5 C DC 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 B N1 DA 8 B DA 8 1_555 C N3 DT 4 C DT 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 B N6 DA 8 B DA 8 1_555 C O4 DT 4 C DT 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 B N1 DA 9 B DA 9 1_555 C N3 DT 3 C DT 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 B N6 DA 9 B DA 9 1_555 C O4 DT 3 C DT 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 B N1 DA 10 B DA 10 1_555 C N3 DT 2 C DT 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 B N6 DA 10 B DA 10 1_555 C O4 DT 2 C DT 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 B N3 DT 11 B DT 11 1_555 C N1 DA 1 C DA 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 B O4 DT 11 B DT 11 1_555 C N6 DA 1 C DA 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3KET _atom_sites.fract_transf_matrix[1][1] 0.020525 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009343 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006496 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAD A 1 213 213 NAD NAD . E 5 MG A 1 214 214 MG MG . F 6 HOH A 1 215 215 HOH HOH . F 6 HOH A 2 216 216 HOH HOH . F 6 HOH A 3 217 217 HOH HOH . F 6 HOH A 4 218 218 HOH HOH . F 6 HOH A 5 219 219 HOH HOH . F 6 HOH A 6 220 220 HOH HOH . F 6 HOH A 7 221 221 HOH HOH . F 6 HOH A 8 222 222 HOH HOH . F 6 HOH A 9 223 223 HOH HOH . F 6 HOH A 10 224 224 HOH HOH . F 6 HOH A 11 225 225 HOH HOH . F 6 HOH A 12 226 226 HOH HOH . F 6 HOH A 13 227 227 HOH HOH . F 6 HOH A 14 228 228 HOH HOH . F 6 HOH A 15 229 229 HOH HOH . F 6 HOH A 16 230 230 HOH HOH . F 6 HOH A 17 231 231 HOH HOH . F 6 HOH A 18 232 232 HOH HOH . F 6 HOH A 19 233 233 HOH HOH . F 6 HOH A 20 234 234 HOH HOH . F 6 HOH A 21 235 235 HOH HOH . F 6 HOH A 22 236 236 HOH HOH . F 6 HOH A 23 237 237 HOH HOH . F 6 HOH A 24 238 238 HOH HOH . F 6 HOH A 25 239 239 HOH HOH . F 6 HOH A 26 240 240 HOH HOH . F 6 HOH A 27 241 241 HOH HOH . F 6 HOH A 28 242 242 HOH HOH . F 6 HOH A 29 243 243 HOH HOH . F 6 HOH A 30 244 244 HOH HOH . F 6 HOH A 31 245 245 HOH HOH . F 6 HOH A 32 246 246 HOH HOH . F 6 HOH A 33 247 247 HOH HOH . F 6 HOH A 34 248 248 HOH HOH . F 6 HOH A 35 249 249 HOH HOH . F 6 HOH A 36 250 250 HOH HOH . F 6 HOH A 37 251 251 HOH HOH . F 6 HOH A 38 252 252 HOH HOH . F 6 HOH A 39 253 253 HOH HOH . F 6 HOH A 40 254 254 HOH HOH . F 6 HOH A 41 255 255 HOH HOH . F 6 HOH A 42 256 256 HOH HOH . F 6 HOH A 43 257 257 HOH HOH . F 6 HOH A 44 258 258 HOH HOH . F 6 HOH A 45 259 259 HOH HOH . F 6 HOH A 46 260 260 HOH HOH . F 6 HOH A 47 261 261 HOH HOH . F 6 HOH A 48 262 262 HOH HOH . F 6 HOH A 49 263 263 HOH HOH . F 6 HOH A 50 264 264 HOH HOH . F 6 HOH A 51 265 265 HOH HOH . F 6 HOH A 52 266 266 HOH HOH . F 6 HOH A 53 267 267 HOH HOH . F 6 HOH A 54 268 268 HOH HOH . F 6 HOH A 55 269 269 HOH HOH . F 6 HOH A 56 270 270 HOH HOH . F 6 HOH A 57 271 271 HOH HOH . F 6 HOH A 58 272 272 HOH HOH . F 6 HOH A 59 273 273 HOH HOH . F 6 HOH A 60 274 274 HOH HOH . F 6 HOH A 61 275 275 HOH HOH . F 6 HOH A 62 276 276 HOH HOH . F 6 HOH A 63 277 277 HOH HOH . F 6 HOH A 64 278 278 HOH HOH . F 6 HOH A 65 279 279 HOH HOH . F 6 HOH A 66 280 280 HOH HOH . F 6 HOH A 67 281 281 HOH HOH . F 6 HOH A 68 282 282 HOH HOH . F 6 HOH A 69 283 283 HOH HOH . F 6 HOH A 70 284 284 HOH HOH . F 6 HOH A 71 285 285 HOH HOH . F 6 HOH A 72 286 286 HOH HOH . F 6 HOH A 73 287 287 HOH HOH . F 6 HOH A 74 288 288 HOH HOH . F 6 HOH A 75 289 289 HOH HOH . F 6 HOH A 76 290 290 HOH HOH . F 6 HOH A 77 291 291 HOH HOH . F 6 HOH A 78 292 292 HOH HOH . F 6 HOH A 79 293 293 HOH HOH . F 6 HOH A 80 294 294 HOH HOH . F 6 HOH A 81 295 295 HOH HOH . F 6 HOH A 82 296 296 HOH HOH . F 6 HOH A 83 297 297 HOH HOH . F 6 HOH A 84 298 298 HOH HOH . F 6 HOH A 85 299 299 HOH HOH . F 6 HOH A 86 300 300 HOH HOH . F 6 HOH A 87 301 301 HOH HOH . F 6 HOH A 88 302 302 HOH HOH . F 6 HOH A 89 303 303 HOH HOH . F 6 HOH A 90 304 304 HOH HOH . F 6 HOH A 91 305 305 HOH HOH . F 6 HOH A 92 306 306 HOH HOH . F 6 HOH A 93 307 307 HOH HOH . F 6 HOH A 94 308 308 HOH HOH . F 6 HOH A 95 309 309 HOH HOH . F 6 HOH A 96 310 310 HOH HOH . F 6 HOH A 97 311 311 HOH HOH . F 6 HOH A 98 312 312 HOH HOH . F 6 HOH A 99 313 313 HOH HOH . F 6 HOH A 100 314 314 HOH HOH . F 6 HOH A 101 315 315 HOH HOH . F 6 HOH A 102 316 316 HOH HOH . F 6 HOH A 103 317 317 HOH HOH . F 6 HOH A 104 318 318 HOH HOH . F 6 HOH A 105 319 319 HOH HOH . F 6 HOH A 106 320 320 HOH HOH . F 6 HOH A 107 321 60 HOH HOH . F 6 HOH A 108 322 322 HOH HOH . F 6 HOH A 109 323 323 HOH HOH . F 6 HOH A 110 324 324 HOH HOH . F 6 HOH A 111 325 325 HOH HOH . G 6 HOH B 1 58 58 HOH HOH . G 6 HOH B 2 61 61 HOH HOH . G 6 HOH B 3 99 99 HOH HOH . H 6 HOH C 1 29 29 HOH HOH . H 6 HOH C 2 30 30 HOH HOH . H 6 HOH C 3 71 71 HOH HOH . H 6 HOH C 4 100 100 HOH HOH . H 6 HOH C 5 101 101 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 7.351 _atom_site.Cartn_y 8.917 _atom_site.Cartn_z 20.507 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 23.02 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 214 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #