data_3KEX # _model_server_result.job_id EaeRKQfa1zg4hiHeZTai7g _model_server_result.datetime_utc '2024-12-23 07:19:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kex # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1001}' # _entry.id 3KEX # _exptl.entry_id 3KEX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.04 _cell.angle_gamma 90 _cell.entry_id 3KEX _cell.length_a 194.164 _cell.length_b 47.637 _cell.length_c 81.281 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KEX _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,C,D,G 2 1 B,E,F,H 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 x+1/2,y+1/2,z 1 0 0 0 1 0 0 0 1 97.082 23.8185 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C O2A ANP . A ANP 1 1_555 D MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc2 G O HOH . A HOH 17 1_555 D MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc3 A OD1 ASN 145 A ASN 820 1_555 D MG MG . A MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc4 E O2A ANP . B ANP 2 1_555 F MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc5 E O3G ANP . B ANP 2 1_555 F MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? metalc ? metalc6 H O HOH . B HOH 21 1_555 F MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc7 H O HOH . B HOH 22 1_555 F MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? metalc ? metalc8 B OD1 ASN 145 B ASN 820 1_555 F MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc9 B OD2 ASP 158 B ASP 833 1_555 F MG MG . B MG 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.891 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3KEX _atom_sites.fract_transf_matrix[1][1] 0.00515 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001678 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020992 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ANP A 1 1 1 ANP ANP . D 3 MG A 1 1001 1 MG MG . E 2 ANP B 1 2 2 ANP ANP . F 3 MG B 1 1001 2 MG MG . G 4 HOH A 1 4 4 HOH HOH . G 4 HOH A 2 5 5 HOH HOH . G 4 HOH A 3 10 10 HOH HOH . G 4 HOH A 4 11 11 HOH HOH . G 4 HOH A 5 14 14 HOH HOH . G 4 HOH A 6 15 15 HOH HOH . G 4 HOH A 7 17 17 HOH HOH . G 4 HOH A 8 18 18 HOH HOH . G 4 HOH A 9 27 27 HOH HOH . G 4 HOH A 10 28 28 HOH HOH . G 4 HOH A 11 30 30 HOH HOH . G 4 HOH A 12 31 31 HOH HOH . G 4 HOH A 13 32 32 HOH HOH . G 4 HOH A 14 33 33 HOH HOH . G 4 HOH A 15 1002 1 HOH HOH . H 4 HOH B 1 3 3 HOH HOH . H 4 HOH B 2 6 6 HOH HOH . H 4 HOH B 3 9 9 HOH HOH . H 4 HOH B 4 12 12 HOH HOH . H 4 HOH B 5 13 13 HOH HOH . H 4 HOH B 6 16 16 HOH HOH . H 4 HOH B 7 21 21 HOH HOH . H 4 HOH B 8 22 22 HOH HOH . H 4 HOH B 9 25 25 HOH HOH . H 4 HOH B 10 26 26 HOH HOH . H 4 HOH B 11 34 34 HOH HOH . H 4 HOH B 12 35 35 HOH HOH . H 4 HOH B 13 36 36 HOH HOH . H 4 HOH B 14 37 37 HOH HOH . H 4 HOH B 15 1002 2 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 26.371 _atom_site.Cartn_y 3.071 _atom_site.Cartn_z -11.635 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #