data_3KFS # _model_server_result.job_id Anr0sOZhrdPzRrR-dDZIIw _model_server_result.datetime_utc '2024-11-08 08:56:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kfs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 3KFS # _exptl.entry_id 3KFS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.234 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-benzothiophen-2-ylacetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KFS _cell.length_a 28.95 _cell.length_b 66.35 _cell.length_c 92.97 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KFS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 67 A CYS 67 1_555 F S2 BME . A BME 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? covale ? covale2 B SG CYS 67 B CYS 67 1_555 I S2 BME . B BME 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? # _chem_comp.formula 'C10 H8 O2 S' _chem_comp.formula_weight 192.234 _chem_comp.id 2FX _chem_comp.mon_nstd_flag . _chem_comp.name '1-benzothiophen-2-ylacetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 O1 2FX sing 1 n n O1 HO1 2FX sing 2 n n C13 C2 2FX sing 3 n n O3 C2 2FX doub 4 n n S12 C4 2FX sing 5 n y C5 C4 2FX doub 6 n y C4 C13 2FX sing 7 n n C6 C5 2FX sing 8 n y C5 H5 2FX sing 9 n n C7 C6 2FX doub 10 n y C11 C6 2FX sing 11 n y C8 C7 2FX sing 12 n y C7 H7 2FX sing 13 n n C9 C8 2FX doub 14 n y C8 H8 2FX sing 15 n n C9 C10 2FX sing 16 n y C9 H9 2FX sing 17 n n C10 C11 2FX doub 18 n y C10 H10 2FX sing 19 n n C11 S12 2FX sing 20 n y C13 H13 2FX sing 21 n n C13 H13A 2FX sing 22 n n # _atom_sites.entry_id 3KFS _atom_sites.fract_transf_matrix[1][1] 0.034542 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015072 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010756 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3TL A 1 200 200 3TL 3TL . D 3 DMS A 1 302 302 DMS DMS . E 3 DMS A 1 304 304 DMS DMS . F 4 BME A 1 401 401 BME BME . G 5 2FX B 1 201 201 2FX 2FX . H 3 DMS B 1 305 305 DMS DMS . I 4 BME B 1 402 402 BME BME . J 6 HOH A 1 202 202 HOH HOH . J 6 HOH A 2 205 205 HOH HOH . J 6 HOH A 3 206 206 HOH HOH . J 6 HOH A 4 209 209 HOH HOH . J 6 HOH A 5 211 211 HOH HOH . J 6 HOH A 6 219 219 HOH HOH . J 6 HOH A 7 222 222 HOH HOH . J 6 HOH A 8 225 225 HOH HOH . J 6 HOH A 9 226 226 HOH HOH . J 6 HOH A 10 231 231 HOH HOH . J 6 HOH A 11 232 232 HOH HOH . J 6 HOH A 12 233 233 HOH HOH . J 6 HOH A 13 235 235 HOH HOH . J 6 HOH A 14 237 237 HOH HOH . J 6 HOH A 15 238 238 HOH HOH . J 6 HOH A 16 242 242 HOH HOH . J 6 HOH A 17 243 243 HOH HOH . J 6 HOH A 18 245 245 HOH HOH . J 6 HOH A 19 247 247 HOH HOH . J 6 HOH A 20 251 251 HOH HOH . J 6 HOH A 21 252 252 HOH HOH . J 6 HOH A 22 255 255 HOH HOH . J 6 HOH A 23 256 256 HOH HOH . J 6 HOH A 24 258 258 HOH HOH . J 6 HOH A 25 260 260 HOH HOH . J 6 HOH A 26 261 261 HOH HOH . J 6 HOH A 27 263 263 HOH HOH . J 6 HOH A 28 265 265 HOH HOH . J 6 HOH A 29 269 269 HOH HOH . J 6 HOH A 30 272 272 HOH HOH . J 6 HOH A 31 273 273 HOH HOH . J 6 HOH A 32 279 279 HOH HOH . J 6 HOH A 33 280 280 HOH HOH . K 6 HOH B 1 203 203 HOH HOH . K 6 HOH B 2 204 204 HOH HOH . K 6 HOH B 3 208 208 HOH HOH . K 6 HOH B 4 210 210 HOH HOH . K 6 HOH B 5 212 212 HOH HOH . K 6 HOH B 6 213 213 HOH HOH . K 6 HOH B 7 215 215 HOH HOH . K 6 HOH B 8 216 216 HOH HOH . K 6 HOH B 9 218 218 HOH HOH . K 6 HOH B 10 220 220 HOH HOH . K 6 HOH B 11 223 223 HOH HOH . K 6 HOH B 12 227 227 HOH HOH . K 6 HOH B 13 228 228 HOH HOH . K 6 HOH B 14 229 229 HOH HOH . K 6 HOH B 15 234 234 HOH HOH . K 6 HOH B 16 236 236 HOH HOH . K 6 HOH B 17 239 239 HOH HOH . K 6 HOH B 18 240 240 HOH HOH . K 6 HOH B 19 241 241 HOH HOH . K 6 HOH B 20 246 246 HOH HOH . K 6 HOH B 21 248 248 HOH HOH . K 6 HOH B 22 249 249 HOH HOH . K 6 HOH B 23 250 250 HOH HOH . K 6 HOH B 24 253 253 HOH HOH . K 6 HOH B 25 254 254 HOH HOH . K 6 HOH B 26 257 257 HOH HOH . K 6 HOH B 27 259 259 HOH HOH . K 6 HOH B 28 262 262 HOH HOH . K 6 HOH B 29 264 264 HOH HOH . K 6 HOH B 30 267 267 HOH HOH . K 6 HOH B 31 268 268 HOH HOH . K 6 HOH B 32 274 274 HOH HOH . K 6 HOH B 33 275 275 HOH HOH . K 6 HOH B 34 277 277 HOH HOH . K 6 HOH B 35 278 278 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2FX . . . G 5 -7.876 -22.555 26.183 1 38.17 ? O1 2FX 201 B 1 HETATM 2 C C2 2FX . . . G 5 -9.026 -22.717 25.534 1 37.51 ? C2 2FX 201 B 1 HETATM 3 O O3 2FX . . . G 5 -9.47 -23.844 25.464 1 41.53 ? O3 2FX 201 B 1 HETATM 4 C C4 2FX . . . G 5 -11.092 -21.81 24.284 1 33.24 ? C4 2FX 201 B 1 HETATM 5 C C5 2FX . . . G 5 -12.007 -22.854 23.998 1 29.45 ? C5 2FX 201 B 1 HETATM 6 C C6 2FX . . . G 5 -13.184 -22.508 23.319 1 28.59 ? C6 2FX 201 B 1 HETATM 7 C C7 2FX . . . G 5 -14.237 -23.345 22.922 1 31.31 ? C7 2FX 201 B 1 HETATM 8 C C8 2FX . . . G 5 -15.363 -22.8 22.283 1 30.65 ? C8 2FX 201 B 1 HETATM 9 C C9 2FX . . . G 5 -15.491 -21.456 21.962 1 30.78 ? C9 2FX 201 B 1 HETATM 10 C C10 2FX . . . G 5 -14.449 -20.586 22.322 1 32.93 ? C10 2FX 201 B 1 HETATM 11 C C11 2FX . . . G 5 -13.35 -21.145 22.996 1 31.97 ? C11 2FX 201 B 1 HETATM 12 S S12 2FX . . . G 5 -11.901 -20.44 23.613 1 37.03 ? S12 2FX 201 B 1 HETATM 13 C C13 2FX . . . G 5 -9.726 -21.537 24.919 1 36.08 ? C13 2FX 201 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #