data_3KFS
#
_model_server_result.job_id            0uVIzdVPje762LXuM9Uveg 
_model_server_result.datetime_utc      '2024-11-08 08:53:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3kfs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":401}' 
#
_entry.id    3KFS 
#
_exptl.entry_id    3KFS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BETA-MERCAPTOETHANOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3KFS 
_cell.length_a            28.95 
_cell.length_b            66.35 
_cell.length_c            92.97 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3KFS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 67 A CYS 67 1_555 F S2 BME . A BME 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? 
covale ? covale2 B SG CYS 67 B CYS 67 1_555 I S2 BME . B BME 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                BME 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BETA-MERCAPTOETHANOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 BME sing 225 n n 
C1 O1 BME sing 226 n n 
C1 H11 BME sing 227 n n 
C1 H12 BME sing 228 n n 
C2 S2 BME sing 229 n n 
C2 H21 BME sing 230 n n 
C2 H22 BME sing 231 n n 
O1 HO1 BME sing 232 n n 
S2 HS2 BME sing 233 n n 
#
_atom_sites.entry_id                     3KFS 
_atom_sites.fract_transf_matrix[1][1]    0.034542 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015072 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010756 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 3TL A 1 200 200 3TL 3TL . 
D 3 DMS A 1 302 302 DMS DMS . 
E 3 DMS A 1 304 304 DMS DMS . 
F 4 BME A 1 401 401 BME BME . 
G 5 2FX B 1 201 201 2FX 2FX . 
H 3 DMS B 1 305 305 DMS DMS . 
I 4 BME B 1 402 402 BME BME . 
J 6 HOH A 1 202 202 HOH HOH . 
J 6 HOH A 2 205 205 HOH HOH . 
J 6 HOH A 3 206 206 HOH HOH . 
J 6 HOH A 4 209 209 HOH HOH . 
J 6 HOH A 5 211 211 HOH HOH . 
J 6 HOH A 6 219 219 HOH HOH . 
J 6 HOH A 7 222 222 HOH HOH . 
J 6 HOH A 8 225 225 HOH HOH . 
J 6 HOH A 9 226 226 HOH HOH . 
J 6 HOH A 10 231 231 HOH HOH . 
J 6 HOH A 11 232 232 HOH HOH . 
J 6 HOH A 12 233 233 HOH HOH . 
J 6 HOH A 13 235 235 HOH HOH . 
J 6 HOH A 14 237 237 HOH HOH . 
J 6 HOH A 15 238 238 HOH HOH . 
J 6 HOH A 16 242 242 HOH HOH . 
J 6 HOH A 17 243 243 HOH HOH . 
J 6 HOH A 18 245 245 HOH HOH . 
J 6 HOH A 19 247 247 HOH HOH . 
J 6 HOH A 20 251 251 HOH HOH . 
J 6 HOH A 21 252 252 HOH HOH . 
J 6 HOH A 22 255 255 HOH HOH . 
J 6 HOH A 23 256 256 HOH HOH . 
J 6 HOH A 24 258 258 HOH HOH . 
J 6 HOH A 25 260 260 HOH HOH . 
J 6 HOH A 26 261 261 HOH HOH . 
J 6 HOH A 27 263 263 HOH HOH . 
J 6 HOH A 28 265 265 HOH HOH . 
J 6 HOH A 29 269 269 HOH HOH . 
J 6 HOH A 30 272 272 HOH HOH . 
J 6 HOH A 31 273 273 HOH HOH . 
J 6 HOH A 32 279 279 HOH HOH . 
J 6 HOH A 33 280 280 HOH HOH . 
K 6 HOH B 1 203 203 HOH HOH . 
K 6 HOH B 2 204 204 HOH HOH . 
K 6 HOH B 3 208 208 HOH HOH . 
K 6 HOH B 4 210 210 HOH HOH . 
K 6 HOH B 5 212 212 HOH HOH . 
K 6 HOH B 6 213 213 HOH HOH . 
K 6 HOH B 7 215 215 HOH HOH . 
K 6 HOH B 8 216 216 HOH HOH . 
K 6 HOH B 9 218 218 HOH HOH . 
K 6 HOH B 10 220 220 HOH HOH . 
K 6 HOH B 11 223 223 HOH HOH . 
K 6 HOH B 12 227 227 HOH HOH . 
K 6 HOH B 13 228 228 HOH HOH . 
K 6 HOH B 14 229 229 HOH HOH . 
K 6 HOH B 15 234 234 HOH HOH . 
K 6 HOH B 16 236 236 HOH HOH . 
K 6 HOH B 17 239 239 HOH HOH . 
K 6 HOH B 18 240 240 HOH HOH . 
K 6 HOH B 19 241 241 HOH HOH . 
K 6 HOH B 20 246 246 HOH HOH . 
K 6 HOH B 21 248 248 HOH HOH . 
K 6 HOH B 22 249 249 HOH HOH . 
K 6 HOH B 23 250 250 HOH HOH . 
K 6 HOH B 24 253 253 HOH HOH . 
K 6 HOH B 25 254 254 HOH HOH . 
K 6 HOH B 26 257 257 HOH HOH . 
K 6 HOH B 27 259 259 HOH HOH . 
K 6 HOH B 28 262 262 HOH HOH . 
K 6 HOH B 29 264 264 HOH HOH . 
K 6 HOH B 30 267 267 HOH HOH . 
K 6 HOH B 31 268 268 HOH HOH . 
K 6 HOH B 32 274 274 HOH HOH . 
K 6 HOH B 33 275 275 HOH HOH . 
K 6 HOH B 34 277 277 HOH HOH . 
K 6 HOH B 35 278 278 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BME . . . F 4 -26.133 6.822 3.665 1 40.03 ? C1 BME 401 A 1 
HETATM 2 C C2 BME . . . F 4 -26 7.844 2.566 1 38.53 ? C2 BME 401 A 1 
HETATM 3 O O1 BME . . . F 4 -27.456 6.537 4.036 1 36.7 ? O1 BME 401 A 1 
HETATM 4 S S2 BME . . . F 4 -24.723 8.921 3.226 1 54.69 ? S2 BME 401 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           44 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#