data_3KGA # _model_server_result.job_id oip_e9b6ixJK_jH1dlUiUw _model_server_result.datetime_utc '2025-02-05 06:36:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kga # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3KGA # _exptl.entry_id 3KGA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3KGA _cell.length_a 103.12 _cell.length_b 103.12 _cell.length_c 165.415 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KGA _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B MG MG . A MG 1 1_555 D O HOH . A HOH 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc2 B MG MG . A MG 1 1_555 A O SER 68 A SER 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc3 B MG MG . A MG 1 1_555 A O CYS 70 A CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc4 B MG MG . A MG 1 1_555 A O ILE 73 A ILE 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3KGA _atom_sites.fract_transf_matrix[1][1] 0.009697 _atom_sites.fract_transf_matrix[1][2] 0.005599 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011198 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 1 1 MG MG . C 3 LX9 A 1 365 1 LX9 LX9 . D 4 HOH A 1 2 2 HOH HOH . D 4 HOH A 2 3 3 HOH HOH . D 4 HOH A 3 4 4 HOH HOH . D 4 HOH A 4 5 5 HOH HOH . D 4 HOH A 5 6 6 HOH HOH . D 4 HOH A 6 7 7 HOH HOH . D 4 HOH A 7 8 8 HOH HOH . D 4 HOH A 8 9 9 HOH HOH . D 4 HOH A 9 10 10 HOH HOH . D 4 HOH A 10 11 11 HOH HOH . D 4 HOH A 11 12 12 HOH HOH . D 4 HOH A 12 13 13 HOH HOH . D 4 HOH A 13 14 14 HOH HOH . D 4 HOH A 14 15 15 HOH HOH . D 4 HOH A 15 16 16 HOH HOH . D 4 HOH A 16 17 17 HOH HOH . D 4 HOH A 17 18 18 HOH HOH . D 4 HOH A 18 19 19 HOH HOH . D 4 HOH A 19 20 20 HOH HOH . D 4 HOH A 20 21 21 HOH HOH . D 4 HOH A 21 22 22 HOH HOH . D 4 HOH A 22 23 23 HOH HOH . D 4 HOH A 23 24 24 HOH HOH . D 4 HOH A 24 25 25 HOH HOH . D 4 HOH A 25 26 26 HOH HOH . D 4 HOH A 26 27 27 HOH HOH . D 4 HOH A 27 28 28 HOH HOH . D 4 HOH A 28 29 29 HOH HOH . D 4 HOH A 29 30 30 HOH HOH . D 4 HOH A 30 31 31 HOH HOH . D 4 HOH A 31 32 32 HOH HOH . D 4 HOH A 32 33 33 HOH HOH . D 4 HOH A 33 34 34 HOH HOH . D 4 HOH A 34 35 35 HOH HOH . D 4 HOH A 35 36 36 HOH HOH . D 4 HOH A 36 37 37 HOH HOH . D 4 HOH A 37 38 38 HOH HOH . D 4 HOH A 38 39 39 HOH HOH . D 4 HOH A 39 40 40 HOH HOH . D 4 HOH A 40 41 41 HOH HOH . D 4 HOH A 41 42 42 HOH HOH . D 4 HOH A 42 366 1 HOH HOH . D 4 HOH A 43 367 43 HOH HOH . D 4 HOH A 44 368 44 HOH HOH . D 4 HOH A 45 369 45 HOH HOH . D 4 HOH A 46 370 46 HOH HOH . D 4 HOH A 47 371 47 HOH HOH . D 4 HOH A 48 372 48 HOH HOH . D 4 HOH A 49 373 49 HOH HOH . D 4 HOH A 50 374 50 HOH HOH . D 4 HOH A 51 375 51 HOH HOH . D 4 HOH A 52 376 52 HOH HOH . D 4 HOH A 53 377 53 HOH HOH . D 4 HOH A 54 378 54 HOH HOH . D 4 HOH A 55 379 55 HOH HOH . D 4 HOH A 56 380 56 HOH HOH . D 4 HOH A 57 381 57 HOH HOH . D 4 HOH A 58 382 58 HOH HOH . D 4 HOH A 59 383 59 HOH HOH . D 4 HOH A 60 384 60 HOH HOH . D 4 HOH A 61 385 61 HOH HOH . D 4 HOH A 62 386 62 HOH HOH . D 4 HOH A 63 387 63 HOH HOH . D 4 HOH A 64 388 64 HOH HOH . D 4 HOH A 65 389 65 HOH HOH . D 4 HOH A 66 390 66 HOH HOH . D 4 HOH A 67 391 67 HOH HOH . D 4 HOH A 68 392 68 HOH HOH . D 4 HOH A 69 393 69 HOH HOH . D 4 HOH A 70 394 70 HOH HOH . D 4 HOH A 71 395 71 HOH HOH . D 4 HOH A 72 396 72 HOH HOH . D 4 HOH A 73 397 73 HOH HOH . D 4 HOH A 74 398 74 HOH HOH . D 4 HOH A 75 399 75 HOH HOH . D 4 HOH A 76 400 76 HOH HOH . D 4 HOH A 77 401 77 HOH HOH . D 4 HOH A 78 402 78 HOH HOH . D 4 HOH A 79 403 79 HOH HOH . D 4 HOH A 80 404 80 HOH HOH . D 4 HOH A 81 405 81 HOH HOH . D 4 HOH A 82 406 82 HOH HOH . D 4 HOH A 83 407 83 HOH HOH . D 4 HOH A 84 408 84 HOH HOH . D 4 HOH A 85 409 85 HOH HOH . D 4 HOH A 86 410 86 HOH HOH . D 4 HOH A 87 411 87 HOH HOH . D 4 HOH A 88 412 88 HOH HOH . D 4 HOH A 89 413 89 HOH HOH . D 4 HOH A 90 414 90 HOH HOH . D 4 HOH A 91 415 91 HOH HOH . D 4 HOH A 92 416 92 HOH HOH . D 4 HOH A 93 417 93 HOH HOH . D 4 HOH A 94 418 94 HOH HOH . D 4 HOH A 95 419 95 HOH HOH . D 4 HOH A 96 420 96 HOH HOH . D 4 HOH A 97 421 97 HOH HOH . D 4 HOH A 98 422 98 HOH HOH . D 4 HOH A 99 423 99 HOH HOH . D 4 HOH A 100 424 100 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 50.728 _atom_site.Cartn_y 5.428 _atom_site.Cartn_z 11.996 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.04 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #