data_3KJ0 # _model_server_result.job_id zdA0-SSLuDIJR8AZd7KV1A _model_server_result.datetime_utc '2024-11-09 02:16:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kj0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":7359}' # _entry.id 3KJ0 # _exptl.entry_id 3KJ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KJ0 _cell.length_a 40.381 _cell.length_b 52.943 _cell.length_c 69.373 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KJ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 334 n n C C2 TRS sing 335 n n C C3 TRS sing 336 n n C N TRS sing 337 n n C1 O1 TRS sing 338 n n C1 H11 TRS sing 339 n n C1 H12 TRS sing 340 n n C2 O2 TRS sing 341 n n C2 H21 TRS sing 342 n n C2 H22 TRS sing 343 n n C3 O3 TRS sing 344 n n C3 H31 TRS sing 345 n n C3 H32 TRS sing 346 n n N HN1 TRS sing 347 n n N HN2 TRS sing 348 n n N HN3 TRS sing 349 n n O1 HO1 TRS sing 350 n n O2 HO2 TRS sing 351 n n O3 HO3 TRS sing 352 n n # _atom_sites.entry_id 3KJ0 _atom_sites.fract_transf_matrix[1][1] 0.024764 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018888 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014415 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 TRS B 1 7359 7359 TRS TRS . D 4 HOH A 1 1 1 HOH HOH . D 4 HOH A 2 2 2 HOH HOH . D 4 HOH A 3 3 3 HOH HOH . D 4 HOH A 4 4 4 HOH HOH . D 4 HOH A 5 5 5 HOH HOH . D 4 HOH A 6 6 6 HOH HOH . D 4 HOH A 7 7 7 HOH HOH . D 4 HOH A 8 8 8 HOH HOH . D 4 HOH A 9 9 9 HOH HOH . D 4 HOH A 10 10 10 HOH HOH . D 4 HOH A 11 11 11 HOH HOH . D 4 HOH A 12 12 12 HOH HOH . D 4 HOH A 13 13 13 HOH HOH . D 4 HOH A 14 14 14 HOH HOH . D 4 HOH A 15 15 15 HOH HOH . D 4 HOH A 16 16 16 HOH HOH . D 4 HOH A 17 17 17 HOH HOH . D 4 HOH A 18 18 18 HOH HOH . D 4 HOH A 19 19 19 HOH HOH . D 4 HOH A 20 20 20 HOH HOH . D 4 HOH A 21 21 21 HOH HOH . D 4 HOH A 22 22 22 HOH HOH . D 4 HOH A 23 23 23 HOH HOH . D 4 HOH A 24 24 24 HOH HOH . D 4 HOH A 25 25 25 HOH HOH . D 4 HOH A 26 26 26 HOH HOH . D 4 HOH A 27 27 27 HOH HOH . D 4 HOH A 28 28 28 HOH HOH . D 4 HOH A 29 30 30 HOH HOH . D 4 HOH A 30 31 31 HOH HOH . D 4 HOH A 31 32 32 HOH HOH . D 4 HOH A 32 33 33 HOH HOH . D 4 HOH A 33 36 36 HOH HOH . D 4 HOH A 34 38 38 HOH HOH . D 4 HOH A 35 39 39 HOH HOH . D 4 HOH A 36 40 40 HOH HOH . D 4 HOH A 37 41 41 HOH HOH . D 4 HOH A 38 42 42 HOH HOH . D 4 HOH A 39 43 43 HOH HOH . D 4 HOH A 40 44 44 HOH HOH . D 4 HOH A 41 46 46 HOH HOH . D 4 HOH A 42 47 47 HOH HOH . D 4 HOH A 43 48 48 HOH HOH . D 4 HOH A 44 51 51 HOH HOH . D 4 HOH A 45 52 52 HOH HOH . D 4 HOH A 46 53 53 HOH HOH . D 4 HOH A 47 54 54 HOH HOH . D 4 HOH A 48 55 55 HOH HOH . D 4 HOH A 49 57 57 HOH HOH . D 4 HOH A 50 59 59 HOH HOH . D 4 HOH A 51 61 61 HOH HOH . D 4 HOH A 52 63 63 HOH HOH . D 4 HOH A 53 64 64 HOH HOH . D 4 HOH A 54 65 65 HOH HOH . D 4 HOH A 55 67 67 HOH HOH . D 4 HOH A 56 68 68 HOH HOH . D 4 HOH A 57 69 69 HOH HOH . D 4 HOH A 58 72 72 HOH HOH . D 4 HOH A 59 73 73 HOH HOH . D 4 HOH A 60 74 74 HOH HOH . D 4 HOH A 61 75 75 HOH HOH . D 4 HOH A 62 76 76 HOH HOH . D 4 HOH A 63 77 77 HOH HOH . D 4 HOH A 64 79 79 HOH HOH . D 4 HOH A 65 81 81 HOH HOH . D 4 HOH A 66 83 83 HOH HOH . D 4 HOH A 67 84 84 HOH HOH . D 4 HOH A 68 85 85 HOH HOH . D 4 HOH A 69 86 86 HOH HOH . D 4 HOH A 70 87 87 HOH HOH . D 4 HOH A 71 88 88 HOH HOH . D 4 HOH A 72 89 89 HOH HOH . D 4 HOH A 73 91 91 HOH HOH . D 4 HOH A 74 92 92 HOH HOH . D 4 HOH A 75 93 93 HOH HOH . D 4 HOH A 76 94 94 HOH HOH . D 4 HOH A 77 95 95 HOH HOH . D 4 HOH A 78 96 96 HOH HOH . D 4 HOH A 79 97 97 HOH HOH . D 4 HOH A 80 99 99 HOH HOH . D 4 HOH A 81 100 100 HOH HOH . D 4 HOH A 82 101 101 HOH HOH . D 4 HOH A 83 103 103 HOH HOH . D 4 HOH A 84 104 104 HOH HOH . D 4 HOH A 85 105 105 HOH HOH . D 4 HOH A 86 106 106 HOH HOH . D 4 HOH A 87 107 107 HOH HOH . D 4 HOH A 88 108 108 HOH HOH . D 4 HOH A 89 109 109 HOH HOH . D 4 HOH A 90 110 110 HOH HOH . D 4 HOH A 91 111 111 HOH HOH . D 4 HOH A 92 113 113 HOH HOH . D 4 HOH A 93 114 114 HOH HOH . D 4 HOH A 94 116 116 HOH HOH . D 4 HOH A 95 117 117 HOH HOH . D 4 HOH A 96 118 118 HOH HOH . D 4 HOH A 97 119 119 HOH HOH . D 4 HOH A 98 120 120 HOH HOH . D 4 HOH A 99 121 121 HOH HOH . D 4 HOH A 100 122 122 HOH HOH . D 4 HOH A 101 123 123 HOH HOH . D 4 HOH A 102 124 124 HOH HOH . D 4 HOH A 103 127 127 HOH HOH . D 4 HOH A 104 128 128 HOH HOH . D 4 HOH A 105 129 129 HOH HOH . D 4 HOH A 106 130 130 HOH HOH . D 4 HOH A 107 131 131 HOH HOH . D 4 HOH A 108 132 132 HOH HOH . D 4 HOH A 109 133 133 HOH HOH . D 4 HOH A 110 134 134 HOH HOH . D 4 HOH A 111 135 135 HOH HOH . D 4 HOH A 112 136 136 HOH HOH . D 4 HOH A 113 137 137 HOH HOH . D 4 HOH A 114 138 138 HOH HOH . D 4 HOH A 115 139 139 HOH HOH . E 4 HOH B 1 29 29 HOH HOH . E 4 HOH B 2 34 34 HOH HOH . E 4 HOH B 3 35 35 HOH HOH . E 4 HOH B 4 37 37 HOH HOH . E 4 HOH B 5 45 45 HOH HOH . E 4 HOH B 6 49 49 HOH HOH . E 4 HOH B 7 50 50 HOH HOH . E 4 HOH B 8 56 56 HOH HOH . E 4 HOH B 9 58 58 HOH HOH . E 4 HOH B 10 60 60 HOH HOH . E 4 HOH B 11 62 62 HOH HOH . E 4 HOH B 12 66 66 HOH HOH . E 4 HOH B 13 70 70 HOH HOH . E 4 HOH B 14 71 71 HOH HOH . E 4 HOH B 15 78 78 HOH HOH . E 4 HOH B 16 80 80 HOH HOH . E 4 HOH B 17 82 82 HOH HOH . E 4 HOH B 18 90 90 HOH HOH . E 4 HOH B 19 98 98 HOH HOH . E 4 HOH B 20 102 102 HOH HOH . E 4 HOH B 21 112 112 HOH HOH . E 4 HOH B 22 115 115 HOH HOH . E 4 HOH B 23 125 125 HOH HOH . E 4 HOH B 24 126 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . C 3 -3.591 -14.708 25.546 1 34.89 ? C TRS 7359 B 1 HETATM 2 C C1 TRS . . . C 3 -4.684 -14.64 24.484 1 37.18 ? C1 TRS 7359 B 1 HETATM 3 C C2 TRS . . . C 3 -2.238 -14.337 24.951 1 24.5 ? C2 TRS 7359 B 1 HETATM 4 C C3 TRS . . . C 3 -3.539 -16.105 26.153 1 34.17 ? C3 TRS 7359 B 1 HETATM 5 N N TRS . . . C 3 -3.88 -13.743 26.606 1 28.01 ? N TRS 7359 B 1 HETATM 6 O O1 TRS . . . C 3 -5.34 -13.391 24.504 1 30.35 ? O1 TRS 7359 B 1 HETATM 7 O O2 TRS . . . C 3 -1.511 -15.506 24.661 1 38.99 ? O2 TRS 7359 B 1 HETATM 8 O O3 TRS . . . C 3 -2.69 -16.1 27.277 1 37.46 ? O3 TRS 7359 B 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 8 #