data_3KJ2 # _model_server_result.job_id i1qyaSsnnljxwTHWS24X9w _model_server_result.datetime_utc '2024-11-17 07:46:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kj2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1428}' # _entry.id 3KJ2 # _exptl.entry_id 3KJ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KJ2 _cell.length_a 51.456 _cell.length_b 71.487 _cell.length_c 119.435 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KJ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA octameric 8 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 2 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 71.487 0 3 'crystal symmetry operation' 3_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 0 0 119.435 4 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 71.487 119.435 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 117 A CYS 286 1_555 A SG CYS 117 A CYS 286 3_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc1 C ZN ZN . A ZN 2 1_555 A OE2 GLU 71 A GLU 240 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc2 C ZN ZN . A ZN 2 1_555 A OD1 ASP 72 A ASP 241 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc3 D ZN ZN . A ZN 3 1_555 A OD1 ASP 135 A ASP 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc4 D ZN ZN . A ZN 3 1_555 F OXT ACT . A ACT 1428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc5 E ZN ZN . A ZN 4 1_555 H O HOH . A HOH 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.589 ? metalc ? metalc6 E ZN ZN . A ZN 4 1_555 A NE2 HIS 151 A HIS 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc7 E ZN ZN . A ZN 4 1_555 A OE2 GLU 153 A GLU 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc8 E ZN ZN . A ZN 4 1_555 A OE1 GLU 153 A GLU 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc9 A NE2 HIS 55 A HIS 224 1_555 G ZN ZN . B ZN 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc10 B OE1 GLU 16 B GLU 16 1_555 G ZN ZN . B ZN 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc11 B OE2 GLU 17 B GLU 17 1_555 G ZN ZN . B ZN 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc12 G ZN ZN . B ZN 23 1_555 I O HOH . B HOH 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3KJ2 _atom_sites.fract_transf_matrix[1][1] 0.019434 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013989 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008373 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 2 2 ZN ZN . D 3 ZN A 1 3 3 ZN ZN . E 3 ZN A 1 4 4 ZN ZN . F 4 ACT A 1 1428 1428 ACT ACT . G 3 ZN B 1 23 1 ZN ZN . H 5 HOH A 1 1 1 HOH HOH . H 5 HOH A 2 5 5 HOH HOH . H 5 HOH A 3 6 6 HOH HOH . H 5 HOH A 4 7 7 HOH HOH . H 5 HOH A 5 8 8 HOH HOH . H 5 HOH A 6 9 9 HOH HOH . H 5 HOH A 7 11 11 HOH HOH . H 5 HOH A 8 12 12 HOH HOH . H 5 HOH A 9 13 13 HOH HOH . H 5 HOH A 10 14 14 HOH HOH . H 5 HOH A 11 15 15 HOH HOH . H 5 HOH A 12 16 16 HOH HOH . H 5 HOH A 13 17 17 HOH HOH . H 5 HOH A 14 19 19 HOH HOH . H 5 HOH A 15 21 21 HOH HOH . H 5 HOH A 16 23 23 HOH HOH . H 5 HOH A 17 24 24 HOH HOH . H 5 HOH A 18 25 25 HOH HOH . H 5 HOH A 19 26 26 HOH HOH . H 5 HOH A 20 29 29 HOH HOH . H 5 HOH A 21 30 30 HOH HOH . H 5 HOH A 22 31 31 HOH HOH . H 5 HOH A 23 33 33 HOH HOH . H 5 HOH A 24 34 34 HOH HOH . H 5 HOH A 25 35 35 HOH HOH . H 5 HOH A 26 36 36 HOH HOH . H 5 HOH A 27 37 37 HOH HOH . H 5 HOH A 28 39 39 HOH HOH . H 5 HOH A 29 40 40 HOH HOH . H 5 HOH A 30 41 41 HOH HOH . H 5 HOH A 31 42 42 HOH HOH . H 5 HOH A 32 43 43 HOH HOH . H 5 HOH A 33 44 44 HOH HOH . H 5 HOH A 34 46 46 HOH HOH . H 5 HOH A 35 47 47 HOH HOH . H 5 HOH A 36 48 48 HOH HOH . H 5 HOH A 37 49 49 HOH HOH . H 5 HOH A 38 50 50 HOH HOH . H 5 HOH A 39 51 51 HOH HOH . H 5 HOH A 40 52 52 HOH HOH . H 5 HOH A 41 53 53 HOH HOH . H 5 HOH A 42 55 55 HOH HOH . H 5 HOH A 43 56 56 HOH HOH . H 5 HOH A 44 57 57 HOH HOH . H 5 HOH A 45 58 58 HOH HOH . H 5 HOH A 46 59 59 HOH HOH . H 5 HOH A 47 60 60 HOH HOH . H 5 HOH A 48 61 61 HOH HOH . H 5 HOH A 49 62 62 HOH HOH . H 5 HOH A 50 63 63 HOH HOH . H 5 HOH A 51 64 64 HOH HOH . H 5 HOH A 52 328 2 HOH HOH . H 5 HOH A 53 329 3 HOH HOH . H 5 HOH A 54 330 4 HOH HOH . I 5 HOH B 1 24 10 HOH HOH . I 5 HOH B 2 25 18 HOH HOH . I 5 HOH B 3 26 20 HOH HOH . I 5 HOH B 4 27 27 HOH HOH . I 5 HOH B 5 28 28 HOH HOH . I 5 HOH B 6 29 22 HOH HOH . I 5 HOH B 7 32 32 HOH HOH . I 5 HOH B 8 38 38 HOH HOH . I 5 HOH B 9 45 45 HOH HOH . I 5 HOH B 10 54 54 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . F 4 -13.872 36.522 38.015 1 49.88 ? C ACT 1428 A 1 HETATM 2 O O ACT . . . F 4 -14.681 36.663 37.072 1 51.91 ? O ACT 1428 A 1 HETATM 3 O OXT ACT . . . F 4 -13.65 35.347 38.369 1 42.78 ? OXT ACT 1428 A 1 HETATM 4 C CH3 ACT . . . F 4 -13.204 37.688 38.683 1 30.13 ? CH3 ACT 1428 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #