data_3KKB
#
_model_server_result.job_id            y-efSseYIFdOagRknKmHJQ 
_model_server_result.datetime_utc      '2024-12-21 16:32:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3kkb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":2}' 
#
_entry.id    3KKB 
#
_exptl.entry_id    3KKB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3KKB 
_cell.length_a            75.361 
_cell.length_b            75.361 
_cell.length_c            75.02 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3KKB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C ARG 7 A ARG 45 1_555 A N MSE 8 A MSE 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale2 A C MSE 8 A MSE 46 1_555 A N SER 9 A SER 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 A C PRO 90 A PRO 128 1_555 A N MSE 91 A MSE 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale4 A C MSE 91 A MSE 129 1_555 A N ALA 92 A ALA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale5 B C ARG 7 B ARG 45 1_555 B N MSE 8 B MSE 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale6 B C MSE 8 B MSE 46 1_555 B N SER 9 B SER 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale7 B C PRO 90 B PRO 128 1_555 B N MSE 91 B MSE 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale8 B C MSE 91 B MSE 129 1_555 B N ALA 92 B ALA 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 223 n n 
P O2 PO4 sing 224 n n 
P O3 PO4 sing 225 n n 
P O4 PO4 sing 226 n n 
#
_atom_sites.entry_id                     3KKB 
_atom_sites.fract_transf_matrix[1][1]    0.013269 
_atom_sites.fract_transf_matrix[1][2]    0.007661 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015322 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01333 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 PO4 A 1 1 1 PO4 PO4 . 
D 2 PO4 B 1 2 2 PO4 PO4 . 
E 3 HOH A 1 4 4 HOH HOH . 
E 3 HOH A 2 6 6 HOH HOH . 
E 3 HOH A 3 9 9 HOH HOH . 
E 3 HOH A 4 10 10 HOH HOH . 
E 3 HOH A 5 12 12 HOH HOH . 
E 3 HOH A 6 13 13 HOH HOH . 
E 3 HOH A 7 14 14 HOH HOH . 
E 3 HOH A 8 15 15 HOH HOH . 
E 3 HOH A 9 16 16 HOH HOH . 
E 3 HOH A 10 17 17 HOH HOH . 
E 3 HOH A 11 18 18 HOH HOH . 
E 3 HOH A 12 20 20 HOH HOH . 
E 3 HOH A 13 22 22 HOH HOH . 
E 3 HOH A 14 23 23 HOH HOH . 
E 3 HOH A 15 26 26 HOH HOH . 
E 3 HOH A 16 29 29 HOH HOH . 
E 3 HOH A 17 30 30 HOH HOH . 
E 3 HOH A 18 32 32 HOH HOH . 
E 3 HOH A 19 33 33 HOH HOH . 
E 3 HOH A 20 34 34 HOH HOH . 
E 3 HOH A 21 169 1 HOH HOH . 
E 3 HOH A 22 170 170 HOH HOH . 
E 3 HOH A 23 171 41 HOH HOH . 
E 3 HOH A 24 172 44 HOH HOH . 
E 3 HOH A 25 173 173 HOH HOH . 
E 3 HOH A 26 174 46 HOH HOH . 
E 3 HOH A 27 175 47 HOH HOH . 
E 3 HOH A 28 176 176 HOH HOH . 
E 3 HOH A 29 177 50 HOH HOH . 
E 3 HOH A 30 178 178 HOH HOH . 
E 3 HOH A 31 179 179 HOH HOH . 
E 3 HOH A 32 180 180 HOH HOH . 
E 3 HOH A 33 181 181 HOH HOH . 
E 3 HOH A 34 182 51 HOH HOH . 
E 3 HOH A 35 183 52 HOH HOH . 
E 3 HOH A 36 184 55 HOH HOH . 
E 3 HOH A 37 185 59 HOH HOH . 
E 3 HOH A 38 186 60 HOH HOH . 
E 3 HOH A 39 187 61 HOH HOH . 
E 3 HOH A 40 188 64 HOH HOH . 
E 3 HOH A 41 189 67 HOH HOH . 
E 3 HOH A 42 190 68 HOH HOH . 
E 3 HOH A 43 191 69 HOH HOH . 
E 3 HOH A 44 192 71 HOH HOH . 
E 3 HOH A 45 193 74 HOH HOH . 
E 3 HOH A 46 194 79 HOH HOH . 
E 3 HOH A 47 195 80 HOH HOH . 
E 3 HOH A 48 196 81 HOH HOH . 
E 3 HOH A 49 197 85 HOH HOH . 
E 3 HOH A 50 198 87 HOH HOH . 
E 3 HOH A 51 199 89 HOH HOH . 
E 3 HOH A 52 200 90 HOH HOH . 
E 3 HOH A 53 201 92 HOH HOH . 
E 3 HOH A 54 202 94 HOH HOH . 
E 3 HOH A 55 203 95 HOH HOH . 
E 3 HOH A 56 204 96 HOH HOH . 
E 3 HOH A 57 205 99 HOH HOH . 
E 3 HOH A 58 206 102 HOH HOH . 
E 3 HOH A 59 207 105 HOH HOH . 
E 3 HOH A 60 208 106 HOH HOH . 
E 3 HOH A 61 209 107 HOH HOH . 
E 3 HOH A 62 210 108 HOH HOH . 
E 3 HOH A 63 211 111 HOH HOH . 
E 3 HOH A 64 212 112 HOH HOH . 
E 3 HOH A 65 213 114 HOH HOH . 
E 3 HOH A 66 214 116 HOH HOH . 
E 3 HOH A 67 215 118 HOH HOH . 
E 3 HOH A 68 216 119 HOH HOH . 
E 3 HOH A 69 217 121 HOH HOH . 
E 3 HOH A 70 218 123 HOH HOH . 
E 3 HOH A 71 219 125 HOH HOH . 
E 3 HOH A 72 220 126 HOH HOH . 
E 3 HOH A 73 221 127 HOH HOH . 
E 3 HOH A 74 222 128 HOH HOH . 
E 3 HOH A 75 223 131 HOH HOH . 
E 3 HOH A 76 224 136 HOH HOH . 
E 3 HOH A 77 225 137 HOH HOH . 
E 3 HOH A 78 226 140 HOH HOH . 
E 3 HOH A 79 227 141 HOH HOH . 
E 3 HOH A 80 228 142 HOH HOH . 
E 3 HOH A 81 229 145 HOH HOH . 
E 3 HOH A 82 230 148 HOH HOH . 
E 3 HOH A 83 231 149 HOH HOH . 
E 3 HOH A 84 232 150 HOH HOH . 
E 3 HOH A 85 233 152 HOH HOH . 
E 3 HOH A 86 234 154 HOH HOH . 
E 3 HOH A 87 235 157 HOH HOH . 
E 3 HOH A 88 236 158 HOH HOH . 
E 3 HOH A 89 237 159 HOH HOH . 
E 3 HOH A 90 238 160 HOH HOH . 
E 3 HOH A 91 239 162 HOH HOH . 
E 3 HOH A 92 240 163 HOH HOH . 
E 3 HOH A 93 241 164 HOH HOH . 
E 3 HOH A 94 242 166 HOH HOH . 
E 3 HOH A 95 243 167 HOH HOH . 
F 3 HOH B 1 3 3 HOH HOH . 
F 3 HOH B 2 5 5 HOH HOH . 
F 3 HOH B 3 7 7 HOH HOH . 
F 3 HOH B 4 8 8 HOH HOH . 
F 3 HOH B 5 11 11 HOH HOH . 
F 3 HOH B 6 19 19 HOH HOH . 
F 3 HOH B 7 21 21 HOH HOH . 
F 3 HOH B 8 24 24 HOH HOH . 
F 3 HOH B 9 25 25 HOH HOH . 
F 3 HOH B 10 27 27 HOH HOH . 
F 3 HOH B 11 28 28 HOH HOH . 
F 3 HOH B 12 31 31 HOH HOH . 
F 3 HOH B 13 35 35 HOH HOH . 
F 3 HOH B 14 36 36 HOH HOH . 
F 3 HOH B 15 37 37 HOH HOH . 
F 3 HOH B 16 38 38 HOH HOH . 
F 3 HOH B 17 169 169 HOH HOH . 
F 3 HOH B 18 170 2 HOH HOH . 
F 3 HOH B 19 171 171 HOH HOH . 
F 3 HOH B 20 172 172 HOH HOH . 
F 3 HOH B 21 173 39 HOH HOH . 
F 3 HOH B 22 174 174 HOH HOH . 
F 3 HOH B 23 175 175 HOH HOH . 
F 3 HOH B 24 176 40 HOH HOH . 
F 3 HOH B 25 177 177 HOH HOH . 
F 3 HOH B 26 178 42 HOH HOH . 
F 3 HOH B 27 179 43 HOH HOH . 
F 3 HOH B 28 180 45 HOH HOH . 
F 3 HOH B 29 181 48 HOH HOH . 
F 3 HOH B 30 182 49 HOH HOH . 
F 3 HOH B 31 183 53 HOH HOH . 
F 3 HOH B 32 184 54 HOH HOH . 
F 3 HOH B 33 185 56 HOH HOH . 
F 3 HOH B 34 186 57 HOH HOH . 
F 3 HOH B 35 187 58 HOH HOH . 
F 3 HOH B 36 188 62 HOH HOH . 
F 3 HOH B 37 189 63 HOH HOH . 
F 3 HOH B 38 190 65 HOH HOH . 
F 3 HOH B 39 191 66 HOH HOH . 
F 3 HOH B 40 192 70 HOH HOH . 
F 3 HOH B 41 193 72 HOH HOH . 
F 3 HOH B 42 194 73 HOH HOH . 
F 3 HOH B 43 195 75 HOH HOH . 
F 3 HOH B 44 196 76 HOH HOH . 
F 3 HOH B 45 197 77 HOH HOH . 
F 3 HOH B 46 198 78 HOH HOH . 
F 3 HOH B 47 199 82 HOH HOH . 
F 3 HOH B 48 200 83 HOH HOH . 
F 3 HOH B 49 201 84 HOH HOH . 
F 3 HOH B 50 202 86 HOH HOH . 
F 3 HOH B 51 203 88 HOH HOH . 
F 3 HOH B 52 204 91 HOH HOH . 
F 3 HOH B 53 205 93 HOH HOH . 
F 3 HOH B 54 206 97 HOH HOH . 
F 3 HOH B 55 207 98 HOH HOH . 
F 3 HOH B 56 208 100 HOH HOH . 
F 3 HOH B 57 209 101 HOH HOH . 
F 3 HOH B 58 210 103 HOH HOH . 
F 3 HOH B 59 211 104 HOH HOH . 
F 3 HOH B 60 212 109 HOH HOH . 
F 3 HOH B 61 213 110 HOH HOH . 
F 3 HOH B 62 214 113 HOH HOH . 
F 3 HOH B 63 215 115 HOH HOH . 
F 3 HOH B 64 216 117 HOH HOH . 
F 3 HOH B 65 217 120 HOH HOH . 
F 3 HOH B 66 218 122 HOH HOH . 
F 3 HOH B 67 219 124 HOH HOH . 
F 3 HOH B 68 220 129 HOH HOH . 
F 3 HOH B 69 221 130 HOH HOH . 
F 3 HOH B 70 222 132 HOH HOH . 
F 3 HOH B 71 223 133 HOH HOH . 
F 3 HOH B 72 224 134 HOH HOH . 
F 3 HOH B 73 225 135 HOH HOH . 
F 3 HOH B 74 226 138 HOH HOH . 
F 3 HOH B 75 227 139 HOH HOH . 
F 3 HOH B 76 228 143 HOH HOH . 
F 3 HOH B 77 229 144 HOH HOH . 
F 3 HOH B 78 230 146 HOH HOH . 
F 3 HOH B 79 231 147 HOH HOH . 
F 3 HOH B 80 232 151 HOH HOH . 
F 3 HOH B 81 233 153 HOH HOH . 
F 3 HOH B 82 234 155 HOH HOH . 
F 3 HOH B 83 235 156 HOH HOH . 
F 3 HOH B 84 236 161 HOH HOH . 
F 3 HOH B 85 237 165 HOH HOH . 
F 3 HOH B 86 238 168 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . D 2 -20.267 52.256 20.751 0.8 69.43 ? P PO4 2 B 1 
HETATM 2 O O1 PO4 . . . D 2 -19.856 51.885 19.346 0.8 63.78 ? O1 PO4 2 B 1 
HETATM 3 O O2 PO4 . . . D 2 -21.294 51.268 21.255 0.8 66.4 ? O2 PO4 2 B 1 
HETATM 4 O O3 PO4 . . . D 2 -19.058 52.242 21.659 0.8 67.05 ? O3 PO4 2 B 1 
HETATM 5 O O4 PO4 . . . D 2 -20.863 53.644 20.742 0.8 67.45 ? O4 PO4 2 B 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           5 
#