data_3KKR # _model_server_result.job_id d8oAtdfMQ0R_lR1IcxPGxg _model_server_result.datetime_utc '2024-11-22 17:29:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kkr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":3}' # _entry.id 3KKR # _exptl.entry_id 3KKR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.005 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KKR _cell.length_a 82.32 _cell.length_b 82.32 _cell.length_c 51.057 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KKR _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,B,C,D,E,F,G 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'N O3 -1' _chem_comp.formula_weight 62.005 _chem_comp.id NO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N O1 NO3 doub 237 n n N O2 NO3 sing 238 n n N O3 NO3 sing 239 n n # _atom_sites.entry_id 3KKR _atom_sites.fract_transf_matrix[1][1] 0.012148 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 1 1 NO3 NO3 . C 2 NO3 A 1 2 2 NO3 NO3 . D 2 NO3 A 1 3 3 NO3 NO3 . E 2 NO3 A 1 4 4 NO3 NO3 . F 2 NO3 A 1 5 5 NO3 NO3 . G 3 HOH A 1 7 7 HOH HOH . G 3 HOH A 2 8 8 HOH HOH . G 3 HOH A 3 9 9 HOH HOH . G 3 HOH A 4 10 10 HOH HOH . G 3 HOH A 5 13 13 HOH HOH . G 3 HOH A 6 15 15 HOH HOH . G 3 HOH A 7 21 21 HOH HOH . G 3 HOH A 8 22 22 HOH HOH . G 3 HOH A 9 24 24 HOH HOH . G 3 HOH A 10 25 25 HOH HOH . G 3 HOH A 11 26 26 HOH HOH . G 3 HOH A 12 29 29 HOH HOH . G 3 HOH A 13 32 32 HOH HOH . G 3 HOH A 14 34 34 HOH HOH . G 3 HOH A 15 40 40 HOH HOH . G 3 HOH A 16 42 42 HOH HOH . G 3 HOH A 17 43 43 HOH HOH . G 3 HOH A 18 44 44 HOH HOH . G 3 HOH A 19 48 48 HOH HOH . G 3 HOH A 20 50 50 HOH HOH . G 3 HOH A 21 54 54 HOH HOH . G 3 HOH A 22 55 55 HOH HOH . G 3 HOH A 23 209 209 HOH HOH . G 3 HOH A 24 210 210 HOH HOH . G 3 HOH A 25 211 211 HOH HOH . G 3 HOH A 26 212 212 HOH HOH . G 3 HOH A 27 213 213 HOH HOH . G 3 HOH A 28 214 214 HOH HOH . G 3 HOH A 29 215 215 HOH HOH . G 3 HOH A 30 216 216 HOH HOH . G 3 HOH A 31 217 217 HOH HOH . G 3 HOH A 32 219 219 HOH HOH . G 3 HOH A 33 220 220 HOH HOH . G 3 HOH A 34 221 221 HOH HOH . G 3 HOH A 35 222 222 HOH HOH . G 3 HOH A 36 223 223 HOH HOH . G 3 HOH A 37 224 224 HOH HOH . G 3 HOH A 38 225 225 HOH HOH . G 3 HOH A 39 226 226 HOH HOH . G 3 HOH A 40 227 227 HOH HOH . G 3 HOH A 41 228 228 HOH HOH . G 3 HOH A 42 229 229 HOH HOH . G 3 HOH A 43 230 230 HOH HOH . G 3 HOH A 44 231 231 HOH HOH . G 3 HOH A 45 232 232 HOH HOH . G 3 HOH A 46 233 233 HOH HOH . G 3 HOH A 47 234 234 HOH HOH . G 3 HOH A 48 235 235 HOH HOH . G 3 HOH A 49 236 236 HOH HOH . G 3 HOH A 50 237 237 HOH HOH . G 3 HOH A 51 238 238 HOH HOH . G 3 HOH A 52 239 239 HOH HOH . G 3 HOH A 53 240 240 HOH HOH . G 3 HOH A 54 241 241 HOH HOH . G 3 HOH A 55 242 242 HOH HOH . G 3 HOH A 56 243 243 HOH HOH . G 3 HOH A 57 244 244 HOH HOH . G 3 HOH A 58 245 245 HOH HOH . G 3 HOH A 59 246 246 HOH HOH . G 3 HOH A 60 247 247 HOH HOH . G 3 HOH A 61 248 248 HOH HOH . G 3 HOH A 62 249 249 HOH HOH . G 3 HOH A 63 250 250 HOH HOH . G 3 HOH A 64 251 251 HOH HOH . G 3 HOH A 65 252 252 HOH HOH . G 3 HOH A 66 253 253 HOH HOH . G 3 HOH A 67 254 254 HOH HOH . G 3 HOH A 68 255 255 HOH HOH . G 3 HOH A 69 256 256 HOH HOH . G 3 HOH A 70 257 257 HOH HOH . G 3 HOH A 71 258 258 HOH HOH . G 3 HOH A 72 259 259 HOH HOH . G 3 HOH A 73 260 260 HOH HOH . G 3 HOH A 74 261 261 HOH HOH . G 3 HOH A 75 262 262 HOH HOH . G 3 HOH A 76 263 263 HOH HOH . G 3 HOH A 77 264 264 HOH HOH . G 3 HOH A 78 265 265 HOH HOH . G 3 HOH A 79 266 266 HOH HOH . G 3 HOH A 80 267 267 HOH HOH . G 3 HOH A 81 268 268 HOH HOH . G 3 HOH A 82 269 269 HOH HOH . G 3 HOH A 83 270 270 HOH HOH . G 3 HOH A 84 271 271 HOH HOH . G 3 HOH A 85 272 272 HOH HOH . G 3 HOH A 86 273 273 HOH HOH . G 3 HOH A 87 274 274 HOH HOH . G 3 HOH A 88 275 275 HOH HOH . G 3 HOH A 89 276 276 HOH HOH . G 3 HOH A 90 277 277 HOH HOH . G 3 HOH A 91 278 278 HOH HOH . G 3 HOH A 92 279 279 HOH HOH . G 3 HOH A 93 280 280 HOH HOH . G 3 HOH A 94 281 281 HOH HOH . G 3 HOH A 95 282 282 HOH HOH . G 3 HOH A 96 283 283 HOH HOH . G 3 HOH A 97 284 284 HOH HOH . G 3 HOH A 98 285 285 HOH HOH . G 3 HOH A 99 286 286 HOH HOH . G 3 HOH A 100 287 287 HOH HOH . G 3 HOH A 101 288 288 HOH HOH . G 3 HOH A 102 289 289 HOH HOH . G 3 HOH A 103 290 290 HOH HOH . G 3 HOH A 104 291 291 HOH HOH . G 3 HOH A 105 292 292 HOH HOH . G 3 HOH A 106 293 293 HOH HOH . G 3 HOH A 107 294 294 HOH HOH . G 3 HOH A 108 295 295 HOH HOH . G 3 HOH A 109 296 296 HOH HOH . G 3 HOH A 110 297 297 HOH HOH . G 3 HOH A 111 298 298 HOH HOH . G 3 HOH A 112 299 299 HOH HOH . G 3 HOH A 113 300 300 HOH HOH . G 3 HOH A 114 301 301 HOH HOH . G 3 HOH A 115 302 302 HOH HOH . G 3 HOH A 116 303 303 HOH HOH . G 3 HOH A 117 304 304 HOH HOH . G 3 HOH A 118 305 305 HOH HOH . G 3 HOH A 119 306 306 HOH HOH . G 3 HOH A 120 307 307 HOH HOH . G 3 HOH A 121 308 308 HOH HOH . G 3 HOH A 122 309 309 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO3 . . . D 2 5.042 33.623 -13.556 1 56.59 ? N NO3 3 A 1 HETATM 2 O O1 NO3 . . . D 2 4.86 32.232 -13.387 1 37.86 ? O1 NO3 3 A 1 HETATM 3 O O2 NO3 . . . D 2 4.515 34.284 -14.683 1 44.67 ? O2 NO3 3 A 1 HETATM 4 O O3 NO3 . . . D 2 5.751 34.368 -12.598 1 48.45 ? O3 NO3 3 A 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #