data_3KLM # _model_server_result.job_id NscQinxcGKZ7IY42Clgz-Q _model_server_result.datetime_utc '2024-12-02 20:17:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3klm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":732}' # _entry.id 3KLM # _exptl.entry_id 3KLM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 290.44 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-ALPHA-DIHYDROTESTOSTERONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.18 _cell.angle_gamma 90 _cell.entry_id 3KLM _cell.length_a 123.246 _cell.length_b 43.36 _cell.length_c 60.398 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KLM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H30 O2' _chem_comp.formula_weight 290.44 _chem_comp.id DHT _chem_comp.mon_nstd_flag . _chem_comp.name 5-ALPHA-DIHYDROTESTOSTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DHT sing 83 n n C1 C10 DHT sing 84 n n C1 H11 DHT sing 85 n n C1 H12 DHT sing 86 n n C2 C3 DHT sing 87 n n C2 H21 DHT sing 88 n n C2 H22 DHT sing 89 n n C3 O3 DHT doub 90 n n C3 C4 DHT sing 91 n n C4 C5 DHT sing 92 n n C4 H41 DHT sing 93 n n C4 H42 DHT sing 94 n n C5 C6 DHT sing 95 n n C5 C10 DHT sing 96 n n C5 H5 DHT sing 97 n n C6 C7 DHT sing 98 n n C6 H61 DHT sing 99 n n C6 H62 DHT sing 100 n n C7 C8 DHT sing 101 n n C7 H71 DHT sing 102 n n C7 H72 DHT sing 103 n n C8 C9 DHT sing 104 n n C8 C14 DHT sing 105 n n C8 H8 DHT sing 106 n n C9 C10 DHT sing 107 n n C9 C11 DHT sing 108 n n C9 H9 DHT sing 109 n n C10 C19 DHT sing 110 n n C11 C12 DHT sing 111 n n C11 H111 DHT sing 112 n n C11 H112 DHT sing 113 n n C12 C13 DHT sing 114 n n C12 H121 DHT sing 115 n n C12 H122 DHT sing 116 n n C13 C14 DHT sing 117 n n C13 C17 DHT sing 118 n n C13 C18 DHT sing 119 n n C14 C15 DHT sing 120 n n C14 H14 DHT sing 121 n n C15 C16 DHT sing 122 n n C15 H151 DHT sing 123 n n C15 H152 DHT sing 124 n n C16 C17 DHT sing 125 n n C16 H161 DHT sing 126 n n C16 H162 DHT sing 127 n n C17 O17 DHT sing 128 n n C17 H17 DHT sing 129 n n O17 HO7 DHT sing 130 n n C18 H181 DHT sing 131 n n C18 H182 DHT sing 132 n n C18 H183 DHT sing 133 n n C19 H191 DHT sing 134 n n C19 H192 DHT sing 135 n n C19 H193 DHT sing 136 n n # _atom_sites.entry_id 3KLM _atom_sites.fract_transf_matrix[1][1] 0.008114 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001458 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023063 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016822 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DHT X 1 732 732 DHT DHT . C 3 GOL X 1 328 1 GOL GOL . D 4 HOH X 1 329 1 HOH HOH . D 4 HOH X 2 330 2 HOH HOH . D 4 HOH X 3 331 3 HOH HOH . D 4 HOH X 4 332 7 HOH HOH . D 4 HOH X 5 333 8 HOH HOH . D 4 HOH X 6 334 9 HOH HOH . D 4 HOH X 7 335 10 HOH HOH . D 4 HOH X 8 336 11 HOH HOH . D 4 HOH X 9 337 12 HOH HOH . D 4 HOH X 10 338 13 HOH HOH . D 4 HOH X 11 339 14 HOH HOH . D 4 HOH X 12 340 16 HOH HOH . D 4 HOH X 13 341 18 HOH HOH . D 4 HOH X 14 342 19 HOH HOH . D 4 HOH X 15 343 21 HOH HOH . D 4 HOH X 16 344 22 HOH HOH . D 4 HOH X 17 345 23 HOH HOH . D 4 HOH X 18 346 24 HOH HOH . D 4 HOH X 19 347 25 HOH HOH . D 4 HOH X 20 348 27 HOH HOH . D 4 HOH X 21 349 30 HOH HOH . D 4 HOH X 22 350 32 HOH HOH . D 4 HOH X 23 351 33 HOH HOH . D 4 HOH X 24 352 34 HOH HOH . D 4 HOH X 25 353 36 HOH HOH . D 4 HOH X 26 354 38 HOH HOH . D 4 HOH X 27 355 40 HOH HOH . D 4 HOH X 28 356 41 HOH HOH . D 4 HOH X 29 357 42 HOH HOH . D 4 HOH X 30 358 43 HOH HOH . D 4 HOH X 31 359 45 HOH HOH . D 4 HOH X 32 360 46 HOH HOH . D 4 HOH X 33 361 47 HOH HOH . D 4 HOH X 34 362 49 HOH HOH . D 4 HOH X 35 363 50 HOH HOH . D 4 HOH X 36 364 52 HOH HOH . D 4 HOH X 37 365 53 HOH HOH . D 4 HOH X 38 366 54 HOH HOH . D 4 HOH X 39 367 55 HOH HOH . D 4 HOH X 40 368 56 HOH HOH . D 4 HOH X 41 369 57 HOH HOH . D 4 HOH X 42 370 58 HOH HOH . D 4 HOH X 43 371 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DHT . A . B 2 12.956 6.857 -13.194 0.4 41.9 ? C1 DHT 732 X 1 HETATM 2 C C1 DHT . B . B 2 10.491 11.681 -11.701 0.3 46.21 ? C1 DHT 732 X 1 HETATM 3 C C2 DHT . A . B 2 13.8 5.676 -12.671 0.4 41.3 ? C2 DHT 732 X 1 HETATM 4 C C2 DHT . B . B 2 9.267 12.56 -11.974 0.3 44.89 ? C2 DHT 732 X 1 HETATM 5 C C3 DHT . A . B 2 14.051 5.724 -11.171 0.4 41.42 ? C3 DHT 732 X 1 HETATM 6 C C3 DHT . B . B 2 8.978 12.527 -13.459 0.3 44.33 ? C3 DHT 732 X 1 HETATM 7 O O3 DHT . A . B 2 15.119 5.367 -10.714 0.4 41.93 ? O3 DHT 732 X 1 HETATM 8 O O3 DHT . B . B 2 8.85 13.55 -14.088 0.3 43.09 ? O3 DHT 732 X 1 HETATM 9 C C4 DHT . A . B 2 12.982 6.245 -10.239 0.4 41.77 ? C4 DHT 732 X 1 HETATM 10 C C4 DHT . B . B 2 8.859 11.18 -14.131 0.3 44.41 ? C4 DHT 732 X 1 HETATM 11 C C5 DHT . A . B 2 12.569 7.575 -10.864 0.4 42.48 ? C5 DHT 732 X 1 HETATM 12 C C5 DHT . B . B 2 10.091 10.338 -13.777 0.3 44.91 ? C5 DHT 732 X 1 HETATM 13 C C6 DHT . A . B 2 11.799 8.417 -9.858 0.4 41.49 ? C6 DHT 732 X 1 HETATM 14 C C6 DHT . B . B 2 9.898 8.927 -14.338 0.3 45.16 ? C6 DHT 732 X 1 HETATM 15 C C7 DHT . A . B 2 11.572 9.791 -10.486 0.4 41.45 ? C7 DHT 732 X 1 HETATM 16 C C7 DHT . B . B 2 11.102 8.056 -13.979 0.3 45.88 ? C7 DHT 732 X 1 HETATM 17 C C8 DHT . A . B 2 10.688 9.674 -11.724 0.4 41.08 ? C8 DHT 732 X 1 HETATM 18 C C8 DHT . B . B 2 11.229 7.979 -12.456 0.3 46.87 ? C8 DHT 732 X 1 HETATM 19 C C9 DHT . A . B 2 11.412 8.807 -12.775 0.4 41.89 ? C9 DHT 732 X 1 HETATM 20 C C9 DHT . B . B 2 11.449 9.392 -11.902 0.3 46.71 ? C9 DHT 732 X 1 HETATM 21 C C10 DHT . A . B 2 11.894 7.426 -12.242 0.4 41.93 ? C10 DHT 732 X 1 HETATM 22 C C10 DHT . B . B 2 10.244 10.261 -12.269 0.3 45.67 ? C10 DHT 732 X 1 HETATM 23 C C11 DHT . A . B 2 10.616 8.811 -14.092 0.4 41.6 ? C11 DHT 732 X 1 HETATM 24 C C11 DHT . B . B 2 11.636 9.379 -10.389 0.3 46.63 ? C11 DHT 732 X 1 HETATM 25 C C12 DHT . A . B 2 10.37 10.229 -14.627 0.4 42.21 ? C12 DHT 732 X 1 HETATM 26 C C12 DHT . B . B 2 12.789 8.448 -9.976 0.3 46.92 ? C12 DHT 732 X 1 HETATM 27 C C13 DHT . A . B 2 9.601 11.089 -13.621 0.4 41.19 ? C13 DHT 732 X 1 HETATM 28 C C13 DHT . B . B 2 12.467 7.069 -10.515 0.3 47.72 ? C13 DHT 732 X 1 HETATM 29 C C14 DHT . A . B 2 10.346 11.061 -12.285 0.4 40.83 ? C14 DHT 732 X 1 HETATM 30 C C14 DHT . B . B 2 12.469 7.163 -12.063 0.3 47.48 ? C14 DHT 732 X 1 HETATM 31 C C15 DHT . A . B 2 9.636 12.092 -11.403 0.4 39.5 ? C15 DHT 732 X 1 HETATM 32 C C15 DHT . B . B 2 12.455 5.687 -12.474 0.3 47.45 ? C15 DHT 732 X 1 HETATM 33 C C16 DHT . A . B 2 9.283 13.2 -12.402 0.4 40.04 ? C16 DHT 732 X 1 HETATM 34 C C16 DHT . B . B 2 13.46 5.043 -11.479 0.3 47.86 ? C16 DHT 732 X 1 HETATM 35 C C17 DHT . A . B 2 9.577 12.618 -13.786 0.4 39.94 ? C17 DHT 732 X 1 HETATM 36 C C17 DHT . B . B 2 13.489 5.972 -10.23 0.3 48.01 ? C17 DHT 732 X 1 HETATM 37 O O17 DHT . A . B 2 8.619 13.103 -14.716 0.4 39.47 ? O17 DHT 732 X 1 HETATM 38 O O17 DHT . B . B 2 13.137 5.236 -9.057 0.3 50.62 ? O17 DHT 732 X 1 HETATM 39 C C18 DHT . A . B 2 8.167 10.567 -13.598 0.4 41.49 ? C18 DHT 732 X 1 HETATM 40 C C18 DHT . B . B 2 11.088 6.629 -10.024 0.3 46.99 ? C18 DHT 732 X 1 HETATM 41 C C19 DHT . A . B 2 10.728 6.421 -12.128 0.4 42.09 ? C19 DHT 732 X 1 HETATM 42 C C19 DHT . B . B 2 8.974 9.677 -11.649 0.3 47.11 ? C19 DHT 732 X 1 # _model_server_stats.io_time_ms 37 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 42 #