data_3KLT # _model_server_result.job_id y1P1MlWbty0tJtXjhmFe8g _model_server_result.datetime_utc '2025-02-05 04:41:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3klt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":3}' # _entry.id 3KLT # _exptl.entry_id 3KLT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.278 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PENTAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.71 _cell.angle_gamma 90 _cell.entry_id 3KLT _cell.length_a 63.2 _cell.length_b 30.1 _cell.length_c 82.98 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KLT _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 1 1 A,B,E,F,G,H,I,J,T 2 1 C,D,K,L,M,N,O,P,Q,R,S,U,V 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id N _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id H _struct_conn.ptnr1_label_atom_id SM _struct_conn.ptnr1_label_comp_id SM _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id SM _struct_conn.ptnr1_auth_seq_id 1 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id N _struct_conn.ptnr2_label_atom_id OH7 _struct_conn.ptnr2_label_comp_id 1PE _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id D _struct_conn.ptnr2_auth_comp_id 1PE _struct_conn.ptnr2_auth_seq_id 3 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 3.479 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H22 O6' _chem_comp.formula_weight 238.278 _chem_comp.id 1PE _chem_comp.mon_nstd_flag . _chem_comp.name 'PENTAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PEG400 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OH2 C12 1PE sing 1 n n OH2 HO2 1PE sing 2 n n C12 C22 1PE sing 3 n n C12 H121 1PE sing 4 n n C12 H122 1PE sing 5 n n C22 OH3 1PE sing 6 n n C22 H221 1PE sing 7 n n C22 H222 1PE sing 8 n n OH3 C23 1PE sing 9 n n C13 C23 1PE sing 10 n n C13 OH4 1PE sing 11 n n C13 H131 1PE sing 12 n n C13 H132 1PE sing 13 n n C23 H231 1PE sing 14 n n C23 H232 1PE sing 15 n n OH4 C24 1PE sing 16 n n C14 C24 1PE sing 17 n n C14 OH5 1PE sing 18 n n C14 H141 1PE sing 19 n n C14 H142 1PE sing 20 n n C24 H241 1PE sing 21 n n C24 H242 1PE sing 22 n n OH5 C25 1PE sing 23 n n C15 C25 1PE sing 24 n n C15 OH6 1PE sing 25 n n C15 H151 1PE sing 26 n n C15 H152 1PE sing 27 n n C25 H251 1PE sing 28 n n C25 H252 1PE sing 29 n n OH6 C26 1PE sing 30 n n C16 C26 1PE sing 31 n n C16 OH7 1PE sing 32 n n C16 H161 1PE sing 33 n n C16 H162 1PE sing 34 n n C26 H261 1PE sing 35 n n C26 H262 1PE sing 36 n n OH7 HO7 1PE sing 37 n n # _atom_sites.entry_id 3KLT _atom_sites.fract_transf_matrix[1][1] 0.015823 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003569 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.033223 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012354 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 P33 A 1 1 1 P33 PM7 . F 3 SM A 1 3 3 SM SM . G 4 P6G B 1 4 4 P6G PM6 . H 3 SM B 1 1 1 SM SM . I 5 CA B 1 6 6 CA CA . J 5 CA B 1 7 7 CA CA . K 6 PG4 C 1 2 2 PG4 PM4 . L 6 PG4 C 1 5 5 PG4 PM4 . M 5 CA C 1 4 4 CA CA . N 7 1PE D 1 3 3 1PE PM5 . O 8 PGE D 1 6 6 PGE PM3 . P 3 SM D 1 2 2 SM SM . Q 5 CA D 1 5 5 CA CA . R 5 CA D 1 8 8 CA CA . S 5 CA D 1 9 9 CA CA . T 9 HOH B 1 10 10 HOH HOH . T 9 HOH B 2 16 16 HOH HOH . U 9 HOH C 1 12 12 HOH HOH . U 9 HOH C 2 15 15 HOH HOH . V 9 HOH D 1 11 11 HOH HOH . V 9 HOH D 2 13 13 HOH HOH . V 9 HOH D 3 14 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OH2 1PE . . . N 7 -2.86 16.361 78.964 1 43.45 ? OH2 1PE 3 D 1 HETATM 2 C C12 1PE . . . N 7 -3.893 15.478 79.414 1 58.78 ? C12 1PE 3 D 1 HETATM 3 C C22 1PE . . . N 7 -4.773 16.193 80.434 1 71.99 ? C22 1PE 3 D 1 HETATM 4 O OH3 1PE . . . N 7 -3.993 16.564 81.569 1 61.36 ? OH3 1PE 3 D 1 HETATM 5 C C13 1PE . . . N 7 -3.981 17.431 83.809 1 34.79 ? C13 1PE 3 D 1 HETATM 6 C C23 1PE . . . N 7 -4.729 17.374 82.483 1 39.86 ? C23 1PE 3 D 1 HETATM 7 O OH4 1PE . . . N 7 -2.773 18.173 83.657 1 39.52 ? OH4 1PE 3 D 1 HETATM 8 C C14 1PE . . . N 7 -0.715 18.752 84.795 1 34.81 ? C14 1PE 3 D 1 HETATM 9 C C24 1PE . . . N 7 -1.773 17.684 84.548 1 50.82 ? C24 1PE 3 D 1 HETATM 10 O OH5 1PE . . . N 7 -0.382 19.406 83.573 1 34.82 ? OH5 1PE 3 D 1 HETATM 11 C C15 1PE . . . N 7 0.225 21.707 83.26 1 67.9 ? C15 1PE 3 D 1 HETATM 12 C C25 1PE . . . N 7 0.675 20.343 83.771 1 35.17 ? C25 1PE 3 D 1 HETATM 13 O OH6 1PE . . . N 7 1.181 22.705 83.611 1 54.19 ? OH6 1PE 3 D 1 HETATM 14 C C16 1PE . . . N 7 1.619 24.872 82.652 1 54.75 ? C16 1PE 3 D 1 HETATM 15 C C26 1PE . . . N 7 0.647 24.018 83.455 1 46.4 ? C26 1PE 3 D 1 HETATM 16 O OH7 1PE . . . N 7 1.867 24.233 81.394 1 30.75 ? OH7 1PE 3 D 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 584 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 16 #