data_3KNV
#
_model_server_result.job_id            YD1DnbYZW1cUMBZ9co-xUg 
_model_server_result.datetime_utc      '2025-07-30 21:46:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3knv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    3KNV 
#
_exptl.entry_id    3KNV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3KNV 
_cell.length_a            43.669 
_cell.length_b            43.669 
_cell.length_c            284.393 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3KNV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 34 A CYS 34 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? 
metalc ? metalc2 A SG CYS 37 A CYS 37 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? 
metalc ? metalc3 A SG CYS 49 A CYS 49 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? 
metalc ? metalc4 A ND1 HIS 51 A HIS 51 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc5 A SG CYS 54 A CYS 54 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.438 ? 
metalc ? metalc6 A SG CYS 57 A CYS 57 1_555 C ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc7 A SG CYS 69 A CYS 69 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? 
metalc ? metalc8 A SG CYS 72 A CYS 72 1_555 B ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc9 A SG CYS 107 A CYS 107 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? 
metalc ? metalc10 A SG CYS 112 A CYS 112 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? 
metalc ? metalc11 A NE2 HIS 125 A HIS 125 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? 
metalc ? metalc12 A SG CYS 129 A CYS 129 1_555 D ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3KNV 
_atom_sites.fract_transf_matrix[1][1]    0.0229 
_atom_sites.fract_transf_matrix[1][2]    0.013221 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.026442 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003516 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 201 201 ZN ZN . 
C 2 ZN A 1 202 202 ZN ZN . 
D 2 ZN A 1 203 203 ZN ZN . 
E 3 HOH A 1 142 1 HOH HOH . 
E 3 HOH A 2 143 2 HOH HOH . 
E 3 HOH A 3 144 3 HOH HOH . 
E 3 HOH A 4 145 4 HOH HOH . 
E 3 HOH A 5 146 5 HOH HOH . 
E 3 HOH A 6 147 6 HOH HOH . 
E 3 HOH A 7 148 7 HOH HOH . 
E 3 HOH A 8 149 8 HOH HOH . 
E 3 HOH A 9 150 9 HOH HOH . 
E 3 HOH A 10 151 10 HOH HOH . 
E 3 HOH A 11 152 11 HOH HOH . 
E 3 HOH A 12 153 12 HOH HOH . 
E 3 HOH A 13 154 13 HOH HOH . 
E 3 HOH A 14 155 14 HOH HOH . 
E 3 HOH A 15 156 15 HOH HOH . 
E 3 HOH A 16 157 16 HOH HOH . 
E 3 HOH A 17 158 17 HOH HOH . 
E 3 HOH A 18 159 18 HOH HOH . 
E 3 HOH A 19 160 19 HOH HOH . 
E 3 HOH A 20 161 20 HOH HOH . 
E 3 HOH A 21 162 21 HOH HOH . 
E 3 HOH A 22 163 22 HOH HOH . 
E 3 HOH A 23 164 23 HOH HOH . 
E 3 HOH A 24 165 24 HOH HOH . 
E 3 HOH A 25 166 25 HOH HOH . 
E 3 HOH A 26 167 26 HOH HOH . 
E 3 HOH A 27 168 27 HOH HOH . 
E 3 HOH A 28 169 28 HOH HOH . 
E 3 HOH A 29 170 29 HOH HOH . 
E 3 HOH A 30 171 30 HOH HOH . 
E 3 HOH A 31 172 31 HOH HOH . 
E 3 HOH A 32 173 32 HOH HOH . 
E 3 HOH A 33 174 33 HOH HOH . 
E 3 HOH A 34 175 34 HOH HOH . 
E 3 HOH A 35 176 35 HOH HOH . 
E 3 HOH A 36 177 36 HOH HOH . 
E 3 HOH A 37 178 37 HOH HOH . 
E 3 HOH A 38 179 38 HOH HOH . 
E 3 HOH A 39 180 39 HOH HOH . 
E 3 HOH A 40 181 40 HOH HOH . 
E 3 HOH A 41 182 41 HOH HOH . 
E 3 HOH A 42 183 42 HOH HOH . 
E 3 HOH A 43 184 43 HOH HOH . 
E 3 HOH A 44 185 44 HOH HOH . 
E 3 HOH A 45 186 45 HOH HOH . 
E 3 HOH A 46 187 46 HOH HOH . 
E 3 HOH A 47 188 47 HOH HOH . 
E 3 HOH A 48 189 48 HOH HOH . 
E 3 HOH A 49 190 49 HOH HOH . 
E 3 HOH A 50 191 50 HOH HOH . 
E 3 HOH A 51 192 51 HOH HOH . 
E 3 HOH A 52 193 52 HOH HOH . 
E 3 HOH A 53 194 53 HOH HOH . 
E 3 HOH A 54 195 54 HOH HOH . 
E 3 HOH A 55 196 55 HOH HOH . 
E 3 HOH A 56 197 56 HOH HOH . 
E 3 HOH A 57 198 57 HOH HOH . 
E 3 HOH A 58 199 58 HOH HOH . 
E 3 HOH A 59 200 59 HOH HOH . 
E 3 HOH A 60 204 60 HOH HOH . 
E 3 HOH A 61 205 61 HOH HOH . 
E 3 HOH A 62 206 62 HOH HOH . 
E 3 HOH A 63 207 63 HOH HOH . 
E 3 HOH A 64 208 64 HOH HOH . 
E 3 HOH A 65 209 65 HOH HOH . 
E 3 HOH A 66 210 66 HOH HOH . 
E 3 HOH A 67 211 67 HOH HOH . 
E 3 HOH A 68 212 68 HOH HOH . 
E 3 HOH A 69 213 69 HOH HOH . 
E 3 HOH A 70 214 70 HOH HOH . 
E 3 HOH A 71 215 71 HOH HOH . 
E 3 HOH A 72 216 72 HOH HOH . 
E 3 HOH A 73 217 73 HOH HOH . 
E 3 HOH A 74 218 74 HOH HOH . 
E 3 HOH A 75 219 75 HOH HOH . 
E 3 HOH A 76 220 76 HOH HOH . 
E 3 HOH A 77 221 77 HOH HOH . 
E 3 HOH A 78 222 78 HOH HOH . 
E 3 HOH A 79 223 79 HOH HOH . 
E 3 HOH A 80 224 80 HOH HOH . 
E 3 HOH A 81 225 81 HOH HOH . 
E 3 HOH A 82 226 82 HOH HOH . 
E 3 HOH A 83 227 83 HOH HOH . 
E 3 HOH A 84 228 84 HOH HOH . 
E 3 HOH A 85 229 85 HOH HOH . 
E 3 HOH A 86 230 86 HOH HOH . 
E 3 HOH A 87 231 87 HOH HOH . 
E 3 HOH A 88 232 88 HOH HOH . 
E 3 HOH A 89 233 89 HOH HOH . 
E 3 HOH A 90 234 90 HOH HOH . 
E 3 HOH A 91 235 91 HOH HOH . 
E 3 HOH A 92 236 92 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -4.318 
_atom_site.Cartn_y               22.43 
_atom_site.Cartn_z               -3.928 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        37.86 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           203 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           329 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#