data_3KO8 # _model_server_result.job_id KSvSL1vn1ybkNLjuq-uxPg _model_server_result.datetime_utc '2024-11-16 03:39:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ko8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1001}' # _entry.id 3KO8 # _exptl.entry_id 3KO8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KO8 _cell.length_a 100.803 _cell.length_b 100.803 _cell.length_c 76.302 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KO8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 76.302 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 335 n n P O2 PO4 sing 336 n n P O3 PO4 sing 337 n n P O4 PO4 sing 338 n n # _atom_sites.entry_id 3KO8 _atom_sites.fract_transf_matrix[1][1] 0.00992 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00992 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013106 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 901 901 NAD NAD . C 3 PO4 A 1 1001 1001 PO4 PO4 . D 4 HOH A 1 2001 2001 HOH HOH . D 4 HOH A 2 2002 2002 HOH HOH . D 4 HOH A 3 2003 2003 HOH HOH . D 4 HOH A 4 2004 2004 HOH HOH . D 4 HOH A 5 2005 2005 HOH HOH . D 4 HOH A 6 2006 2006 HOH HOH . D 4 HOH A 7 2007 2007 HOH HOH . D 4 HOH A 8 2008 2008 HOH HOH . D 4 HOH A 9 2009 2009 HOH HOH . D 4 HOH A 10 2010 2010 HOH HOH . D 4 HOH A 11 2011 2011 HOH HOH . D 4 HOH A 12 2012 2012 HOH HOH . D 4 HOH A 13 2013 2013 HOH HOH . D 4 HOH A 14 2014 2014 HOH HOH . D 4 HOH A 15 2015 2015 HOH HOH . D 4 HOH A 16 2016 2016 HOH HOH . D 4 HOH A 17 2017 2017 HOH HOH . D 4 HOH A 18 2018 2018 HOH HOH . D 4 HOH A 19 2019 2019 HOH HOH . D 4 HOH A 20 2020 2020 HOH HOH . D 4 HOH A 21 2021 2021 HOH HOH . D 4 HOH A 22 2022 2022 HOH HOH . D 4 HOH A 23 2023 2023 HOH HOH . D 4 HOH A 24 2024 2024 HOH HOH . D 4 HOH A 25 2025 2025 HOH HOH . D 4 HOH A 26 2026 2026 HOH HOH . D 4 HOH A 27 2027 2027 HOH HOH . D 4 HOH A 28 2028 2028 HOH HOH . D 4 HOH A 29 2029 2029 HOH HOH . D 4 HOH A 30 2030 2030 HOH HOH . D 4 HOH A 31 2031 2031 HOH HOH . D 4 HOH A 32 2032 2032 HOH HOH . D 4 HOH A 33 2033 2033 HOH HOH . D 4 HOH A 34 2034 2034 HOH HOH . D 4 HOH A 35 2035 2035 HOH HOH . D 4 HOH A 36 2036 2036 HOH HOH . D 4 HOH A 37 2037 2037 HOH HOH . D 4 HOH A 38 2038 2038 HOH HOH . D 4 HOH A 39 2039 2039 HOH HOH . D 4 HOH A 40 2040 2040 HOH HOH . D 4 HOH A 41 2042 2042 HOH HOH . D 4 HOH A 42 2043 2043 HOH HOH . D 4 HOH A 43 2044 2044 HOH HOH . D 4 HOH A 44 2045 2045 HOH HOH . D 4 HOH A 45 2046 2046 HOH HOH . D 4 HOH A 46 2047 2047 HOH HOH . D 4 HOH A 47 2048 2048 HOH HOH . D 4 HOH A 48 2049 2049 HOH HOH . D 4 HOH A 49 2050 2050 HOH HOH . D 4 HOH A 50 2051 2051 HOH HOH . D 4 HOH A 51 2052 2052 HOH HOH . D 4 HOH A 52 2053 2053 HOH HOH . D 4 HOH A 53 2054 2054 HOH HOH . D 4 HOH A 54 2055 2055 HOH HOH . D 4 HOH A 55 2056 2056 HOH HOH . D 4 HOH A 56 2057 2057 HOH HOH . D 4 HOH A 57 2058 2058 HOH HOH . D 4 HOH A 58 2059 2059 HOH HOH . D 4 HOH A 59 2060 2060 HOH HOH . D 4 HOH A 60 2061 2061 HOH HOH . D 4 HOH A 61 2062 2062 HOH HOH . D 4 HOH A 62 2063 2063 HOH HOH . D 4 HOH A 63 2064 2064 HOH HOH . D 4 HOH A 64 2065 2065 HOH HOH . D 4 HOH A 65 2066 2066 HOH HOH . D 4 HOH A 66 2067 2067 HOH HOH . D 4 HOH A 67 2068 2068 HOH HOH . D 4 HOH A 68 2070 2070 HOH HOH . D 4 HOH A 69 2071 2071 HOH HOH . D 4 HOH A 70 2072 2072 HOH HOH . D 4 HOH A 71 2073 2073 HOH HOH . D 4 HOH A 72 2074 2074 HOH HOH . D 4 HOH A 73 2078 2078 HOH HOH . D 4 HOH A 74 2079 2079 HOH HOH . D 4 HOH A 75 2080 2080 HOH HOH . D 4 HOH A 76 2081 2081 HOH HOH . D 4 HOH A 77 2082 2082 HOH HOH . D 4 HOH A 78 2084 2084 HOH HOH . D 4 HOH A 79 2085 2085 HOH HOH . D 4 HOH A 80 2086 2086 HOH HOH . D 4 HOH A 81 2087 2087 HOH HOH . D 4 HOH A 82 2088 2088 HOH HOH . D 4 HOH A 83 2089 2089 HOH HOH . D 4 HOH A 84 2090 2090 HOH HOH . D 4 HOH A 85 2091 2091 HOH HOH . D 4 HOH A 86 2092 2092 HOH HOH . D 4 HOH A 87 2093 2093 HOH HOH . D 4 HOH A 88 2094 2094 HOH HOH . D 4 HOH A 89 2095 2095 HOH HOH . D 4 HOH A 90 2096 2096 HOH HOH . D 4 HOH A 91 2097 2097 HOH HOH . D 4 HOH A 92 2098 2098 HOH HOH . D 4 HOH A 93 2099 2099 HOH HOH . D 4 HOH A 94 2100 2100 HOH HOH . D 4 HOH A 95 2102 2102 HOH HOH . D 4 HOH A 96 2104 2104 HOH HOH . D 4 HOH A 97 2105 2105 HOH HOH . D 4 HOH A 98 2106 2106 HOH HOH . D 4 HOH A 99 2107 2107 HOH HOH . D 4 HOH A 100 2108 2108 HOH HOH . D 4 HOH A 101 2110 2110 HOH HOH . D 4 HOH A 102 2111 2111 HOH HOH . D 4 HOH A 103 2112 2112 HOH HOH . D 4 HOH A 104 2114 2114 HOH HOH . D 4 HOH A 105 2116 2116 HOH HOH . D 4 HOH A 106 2117 2117 HOH HOH . D 4 HOH A 107 2118 2118 HOH HOH . D 4 HOH A 108 2119 2119 HOH HOH . D 4 HOH A 109 2122 2122 HOH HOH . D 4 HOH A 110 2124 2124 HOH HOH . D 4 HOH A 111 2125 2125 HOH HOH . D 4 HOH A 112 2126 2126 HOH HOH . D 4 HOH A 113 2129 2129 HOH HOH . D 4 HOH A 114 2130 2130 HOH HOH . D 4 HOH A 115 2131 2131 HOH HOH . D 4 HOH A 116 2132 2132 HOH HOH . D 4 HOH A 117 2133 2133 HOH HOH . D 4 HOH A 118 2134 2134 HOH HOH . D 4 HOH A 119 2135 2135 HOH HOH . D 4 HOH A 120 2136 2136 HOH HOH . D 4 HOH A 121 2138 2138 HOH HOH . D 4 HOH A 122 2139 2139 HOH HOH . D 4 HOH A 123 2140 2140 HOH HOH . D 4 HOH A 124 2142 2142 HOH HOH . D 4 HOH A 125 2144 2144 HOH HOH . D 4 HOH A 126 2146 2146 HOH HOH . D 4 HOH A 127 2147 2147 HOH HOH . D 4 HOH A 128 2148 2148 HOH HOH . D 4 HOH A 129 2150 2150 HOH HOH . D 4 HOH A 130 2151 2151 HOH HOH . D 4 HOH A 131 2158 2158 HOH HOH . D 4 HOH A 132 2159 2159 HOH HOH . D 4 HOH A 133 2160 2160 HOH HOH . D 4 HOH A 134 2161 2161 HOH HOH . D 4 HOH A 135 2162 2162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 3 6.45 -6.493 19.052 0.5 20.54 ? P PO4 1001 A 1 HETATM 2 O O1 PO4 . . . C 3 7.72 -5.889 19.578 0.5 33.92 ? O1 PO4 1001 A 1 HETATM 3 O O2 PO4 . . . C 3 6.119 -5.795 17.753 0.5 35.16 ? O2 PO4 1001 A 1 HETATM 4 O O3 PO4 . . . C 3 6.616 -7.961 18.782 0.5 33.27 ? O3 PO4 1001 A 1 HETATM 5 O O4 PO4 . . . C 3 5.346 -6.396 20.077 0.5 35.22 ? O4 PO4 1001 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #