data_3KOL # _model_server_result.job_id VA1PlbtFrCoNQ7SqqNzSOg _model_server_result.datetime_utc '2024-11-07 14:38:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kol # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 3KOL # _exptl.entry_id 3KOL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KOL _cell.length_a 50.382 _cell.length_b 50.382 _cell.length_c 138.026 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KOL _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 50.382 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 30 A MSE 30 1_555 A N GLN 31 A GLN 31 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C MSE 145 A MSE 145 1_555 A N ILE 146 A ILE 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 A NE2 HIS 44 A HIS 44 1_555 B CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc2 A NE2 HIS 99 A HIS 99 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc3 A OE1 GLU 147 A GLU 147 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? metalc ? metalc4 D O HOH . A HOH 181 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc5 D O HOH . A HOH 183 1_555 B CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc6 D O HOH . A HOH 237 1_555 B CO CO . A CO 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc7 D O HOH . A HOH 238 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc8 D O HOH . A HOH 239 1_555 C CO CO . A CO 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3KOL _atom_sites.fract_transf_matrix[1][1] 0.019848 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007245 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 301 301 CO CO2 . C 2 CO A 1 302 302 CO CO2 . D 3 HOH A 1 157 1 HOH TIP . D 3 HOH A 2 158 2 HOH TIP . D 3 HOH A 3 159 3 HOH TIP . D 3 HOH A 4 160 4 HOH TIP . D 3 HOH A 5 161 5 HOH TIP . D 3 HOH A 6 162 6 HOH TIP . D 3 HOH A 7 163 7 HOH TIP . D 3 HOH A 8 164 8 HOH TIP . D 3 HOH A 9 165 9 HOH TIP . D 3 HOH A 10 166 10 HOH TIP . D 3 HOH A 11 167 11 HOH TIP . D 3 HOH A 12 168 12 HOH TIP . D 3 HOH A 13 169 13 HOH TIP . D 3 HOH A 14 170 14 HOH TIP . D 3 HOH A 15 171 15 HOH TIP . D 3 HOH A 16 172 16 HOH TIP . D 3 HOH A 17 173 17 HOH TIP . D 3 HOH A 18 174 18 HOH TIP . D 3 HOH A 19 175 19 HOH TIP . D 3 HOH A 20 176 20 HOH TIP . D 3 HOH A 21 177 21 HOH TIP . D 3 HOH A 22 178 22 HOH TIP . D 3 HOH A 23 179 23 HOH TIP . D 3 HOH A 24 180 24 HOH TIP . D 3 HOH A 25 181 25 HOH TIP . D 3 HOH A 26 182 26 HOH TIP . D 3 HOH A 27 183 27 HOH TIP . D 3 HOH A 28 184 28 HOH TIP . D 3 HOH A 29 185 29 HOH TIP . D 3 HOH A 30 186 30 HOH TIP . D 3 HOH A 31 187 31 HOH TIP . D 3 HOH A 32 188 32 HOH TIP . D 3 HOH A 33 189 33 HOH TIP . D 3 HOH A 34 190 34 HOH TIP . D 3 HOH A 35 191 35 HOH TIP . D 3 HOH A 36 192 36 HOH TIP . D 3 HOH A 37 193 37 HOH TIP . D 3 HOH A 38 194 38 HOH TIP . D 3 HOH A 39 195 39 HOH TIP . D 3 HOH A 40 196 40 HOH TIP . D 3 HOH A 41 197 41 HOH TIP . D 3 HOH A 42 198 42 HOH TIP . D 3 HOH A 43 199 43 HOH TIP . D 3 HOH A 44 200 44 HOH TIP . D 3 HOH A 45 201 45 HOH TIP . D 3 HOH A 46 202 46 HOH TIP . D 3 HOH A 47 203 47 HOH TIP . D 3 HOH A 48 204 48 HOH TIP . D 3 HOH A 49 205 49 HOH TIP . D 3 HOH A 50 206 50 HOH TIP . D 3 HOH A 51 207 51 HOH TIP . D 3 HOH A 52 208 52 HOH TIP . D 3 HOH A 53 209 53 HOH TIP . D 3 HOH A 54 210 54 HOH TIP . D 3 HOH A 55 211 55 HOH TIP . D 3 HOH A 56 212 56 HOH TIP . D 3 HOH A 57 213 57 HOH TIP . D 3 HOH A 58 214 58 HOH TIP . D 3 HOH A 59 215 59 HOH TIP . D 3 HOH A 60 216 60 HOH TIP . D 3 HOH A 61 217 61 HOH TIP . D 3 HOH A 62 218 62 HOH TIP . D 3 HOH A 63 219 63 HOH TIP . D 3 HOH A 64 220 64 HOH TIP . D 3 HOH A 65 221 65 HOH TIP . D 3 HOH A 66 222 66 HOH TIP . D 3 HOH A 67 223 67 HOH TIP . D 3 HOH A 68 224 68 HOH TIP . D 3 HOH A 69 225 69 HOH TIP . D 3 HOH A 70 226 70 HOH TIP . D 3 HOH A 71 227 71 HOH TIP . D 3 HOH A 72 228 72 HOH TIP . D 3 HOH A 73 229 73 HOH TIP . D 3 HOH A 74 230 74 HOH TIP . D 3 HOH A 75 231 75 HOH TIP . D 3 HOH A 76 232 76 HOH TIP . D 3 HOH A 77 233 77 HOH TIP . D 3 HOH A 78 234 78 HOH TIP . D 3 HOH A 79 235 79 HOH TIP . D 3 HOH A 80 236 80 HOH TIP . D 3 HOH A 81 237 81 HOH TIP . D 3 HOH A 82 238 82 HOH TIP . D 3 HOH A 83 239 83 HOH TIP . D 3 HOH A 84 240 84 HOH TIP . D 3 HOH A 85 241 85 HOH TIP . D 3 HOH A 86 242 86 HOH TIP . D 3 HOH A 87 243 87 HOH TIP . D 3 HOH A 88 244 88 HOH TIP . D 3 HOH A 89 245 89 HOH TIP . D 3 HOH A 90 246 90 HOH TIP . D 3 HOH A 91 247 91 HOH TIP . D 3 HOH A 92 248 92 HOH TIP . D 3 HOH A 93 249 93 HOH TIP . D 3 HOH A 94 250 94 HOH TIP . D 3 HOH A 95 251 95 HOH TIP . D 3 HOH A 96 252 96 HOH TIP . D 3 HOH A 97 253 97 HOH TIP . D 3 HOH A 98 254 98 HOH TIP . D 3 HOH A 99 255 99 HOH TIP . D 3 HOH A 100 256 100 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 20.09 _atom_site.Cartn_y 30.292 _atom_site.Cartn_z 17.253 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 11.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #