data_3KQ6 # _model_server_result.job_id Pm1KqxId1yWVusI_Dh6epQ _model_server_result.datetime_utc '2024-10-18 16:22:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kq6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 3KQ6 # _exptl.entry_id 3KQ6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3KQ6 _cell.length_a 78.091 _cell.length_b 78.091 _cell.length_c 36.399 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KQ6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 78.091 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 39.0455 67.62879 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf5 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf6 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc1 A ND1 HIS 4 A HIS 4 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc2 A ND1 HIS 8 A HIS 8 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc3 B NE2 HIS 10 B HIS 10 1_555 G ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc4 D NE2 HIS 10 D HIS 10 1_555 I ZN ZN . D ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3KQ6 _atom_sites.fract_transf_matrix[1][1] 0.012806 _atom_sites.fract_transf_matrix[1][2] 0.007393 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014787 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 301 301 ZN ZN . F 4 CL A 1 302 302 CL CL . G 3 ZN B 1 101 101 ZN ZN . H 5 IPH C 1 100 100 IPH IPH . I 3 ZN D 1 201 201 ZN ZN . J 4 CL D 1 202 202 CL CL . K 6 HOH A 1 22 22 HOH HOH . K 6 HOH A 2 23 23 HOH HOH . K 6 HOH A 3 24 24 HOH HOH . K 6 HOH A 4 25 25 HOH HOH . K 6 HOH A 5 26 26 HOH HOH . K 6 HOH A 6 27 27 HOH HOH . K 6 HOH A 7 28 28 HOH HOH . K 6 HOH A 8 33 33 HOH HOH . K 6 HOH A 9 37 37 HOH HOH . K 6 HOH A 10 38 38 HOH HOH . K 6 HOH A 11 40 40 HOH HOH . K 6 HOH A 12 41 41 HOH HOH . K 6 HOH A 13 46 46 HOH HOH . K 6 HOH A 14 54 54 HOH HOH . K 6 HOH A 15 61 61 HOH HOH . K 6 HOH A 16 62 62 HOH HOH . K 6 HOH A 17 76 76 HOH HOH . L 6 HOH B 1 31 31 HOH HOH . L 6 HOH B 2 32 32 HOH HOH . L 6 HOH B 3 33 33 HOH HOH . L 6 HOH B 4 34 34 HOH HOH . L 6 HOH B 5 35 35 HOH HOH . L 6 HOH B 6 36 36 HOH HOH . L 6 HOH B 7 37 37 HOH HOH . L 6 HOH B 8 39 39 HOH HOH . L 6 HOH B 9 42 42 HOH HOH . L 6 HOH B 10 44 44 HOH HOH . L 6 HOH B 11 51 51 HOH HOH . L 6 HOH B 12 55 55 HOH HOH . L 6 HOH B 13 57 57 HOH HOH . L 6 HOH B 14 58 58 HOH HOH . L 6 HOH B 15 64 64 HOH HOH . L 6 HOH B 16 65 65 HOH HOH . L 6 HOH B 17 68 68 HOH HOH . L 6 HOH B 18 74 74 HOH HOH . L 6 HOH B 19 75 75 HOH HOH . L 6 HOH B 20 78 78 HOH HOH . L 6 HOH B 21 80 80 HOH HOH . M 6 HOH C 1 22 22 HOH HOH . M 6 HOH C 2 23 23 HOH HOH . M 6 HOH C 3 24 24 HOH HOH . M 6 HOH C 4 25 25 HOH HOH . M 6 HOH C 5 26 26 HOH HOH . M 6 HOH C 6 29 29 HOH HOH . M 6 HOH C 7 34 34 HOH HOH . M 6 HOH C 8 35 35 HOH HOH . M 6 HOH C 9 48 48 HOH HOH . M 6 HOH C 10 49 49 HOH HOH . M 6 HOH C 11 50 50 HOH HOH . M 6 HOH C 12 53 53 HOH HOH . M 6 HOH C 13 59 59 HOH HOH . M 6 HOH C 14 60 60 HOH HOH . M 6 HOH C 15 63 63 HOH HOH . M 6 HOH C 16 69 69 HOH HOH . M 6 HOH C 17 77 77 HOH HOH . M 6 HOH C 18 79 79 HOH HOH . N 6 HOH D 1 31 31 HOH HOH . N 6 HOH D 2 32 32 HOH HOH . N 6 HOH D 3 33 33 HOH HOH . N 6 HOH D 4 34 34 HOH HOH . N 6 HOH D 5 35 35 HOH HOH . N 6 HOH D 6 36 36 HOH HOH . N 6 HOH D 7 37 37 HOH HOH . N 6 HOH D 8 38 38 HOH HOH . N 6 HOH D 9 39 39 HOH HOH . N 6 HOH D 10 40 40 HOH HOH . N 6 HOH D 11 41 41 HOH HOH . N 6 HOH D 12 42 42 HOH HOH . N 6 HOH D 13 43 43 HOH HOH . N 6 HOH D 14 44 44 HOH HOH . N 6 HOH D 15 45 45 HOH HOH . N 6 HOH D 16 47 47 HOH HOH . N 6 HOH D 17 52 52 HOH HOH . N 6 HOH D 18 56 56 HOH HOH . N 6 HOH D 19 66 66 HOH HOH . N 6 HOH D 20 67 67 HOH HOH . N 6 HOH D 21 70 70 HOH HOH . N 6 HOH D 22 71 71 HOH HOH . N 6 HOH D 23 72 72 HOH HOH . N 6 HOH D 24 73 73 HOH HOH . N 6 HOH D 25 81 81 HOH HOH . N 6 HOH D 26 82 82 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 37.678 _atom_site.Cartn_y 8.233 _atom_site.Cartn_z 18.574 _atom_site.occupancy 0.91 _atom_site.B_iso_or_equiv 34.5 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #