data_3KRL # _model_server_result.job_id -nubY5klCjbjFfR4GTt0_g _model_server_result.datetime_utc '2024-12-26 10:40:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3krl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3KRL # _exptl.entry_id 3KRL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 393.482 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-cyano-N-[4-(4-methylpiperazin-1-yl)-2-piperidin-1-ylphenyl]furan-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3KRL _cell.length_a 81.111 _cell.length_b 81.111 _cell.length_c 142.57 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KRL _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H27 N5 O2' _chem_comp.formula_weight 393.482 _chem_comp.id KRL _chem_comp.mon_nstd_flag . _chem_comp.name 5-cyano-N-[4-(4-methylpiperazin-1-yl)-2-piperidin-1-ylphenyl]furan-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag H01 C01 KRL sing 173 n n H01A C01 KRL sing 174 n n H01B C01 KRL sing 175 n n C01 N02 KRL sing 176 n n C07 N02 KRL sing 177 n n N02 C03 KRL sing 178 n n H03 C03 KRL sing 179 n n C03 H03A KRL sing 180 n n C03 C04 KRL sing 181 n n N05 C04 KRL sing 182 n n H04A C04 KRL sing 183 n n C04 H04 KRL sing 184 n n C06 N05 KRL sing 185 n n N05 C08 KRL sing 186 n n C07 C06 KRL sing 187 n n H06 C06 KRL sing 188 n n C06 H06A KRL sing 189 n n H07A C07 KRL sing 190 n n H07 C07 KRL sing 191 n n C09 C08 KRL doub 192 n y C08 C23 KRL sing 193 n y H09 C09 KRL sing 194 n n C09 C10 KRL sing 195 n y H10 C10 KRL sing 196 n n C10 C11 KRL doub 197 n y C11 C22 KRL sing 198 n y C11 N12 KRL sing 199 n n C13 N12 KRL sing 200 n n N12 HN12 KRL sing 201 n n O14 C13 KRL doub 202 n n C13 C15 KRL sing 203 n n C15 C16 KRL doub 204 n y C15 O21 KRL sing 205 n y H16 C16 KRL sing 206 n n C16 C17 KRL sing 207 n y C17 H17 KRL sing 208 n n C17 C18 KRL doub 209 n y O21 C18 KRL sing 210 n y C18 C19 KRL sing 211 n n C19 N20 KRL trip 212 n n C23 C22 KRL doub 213 n y C22 N24 KRL sing 214 n n C23 H23 KRL sing 215 n n N24 C25 KRL sing 216 n n N24 C29 KRL sing 217 n n H25 C25 KRL sing 218 n n H25A C25 KRL sing 219 n n C25 C26 KRL sing 220 n n C26 H26A KRL sing 221 n n C26 H26 KRL sing 222 n n C26 C27 KRL sing 223 n n C28 C27 KRL sing 224 n n H27A C27 KRL sing 225 n n C27 H27 KRL sing 226 n n C29 C28 KRL sing 227 n n H28A C28 KRL sing 228 n n C28 H28 KRL sing 229 n n H29A C29 KRL sing 230 n n C29 H29 KRL sing 231 n n # _atom_sites.entry_id 3KRL _atom_sites.fract_transf_matrix[1][1] 0.012329 _atom_sites.fract_transf_matrix[1][2] 0.007118 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014236 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KRL A 1 1 1 KRL KRL . C 3 SO4 A 1 923 1 SO4 SO4 . D 4 HOH A 1 2 2 HOH HOH . D 4 HOH A 2 3 3 HOH HOH . D 4 HOH A 3 4 4 HOH HOH . D 4 HOH A 4 5 5 HOH HOH . D 4 HOH A 5 6 6 HOH HOH . D 4 HOH A 6 7 7 HOH HOH . D 4 HOH A 7 8 8 HOH HOH . D 4 HOH A 8 9 9 HOH HOH . D 4 HOH A 9 10 10 HOH HOH . D 4 HOH A 10 11 11 HOH HOH . D 4 HOH A 11 12 12 HOH HOH . D 4 HOH A 12 13 13 HOH HOH . D 4 HOH A 13 14 14 HOH HOH . D 4 HOH A 14 15 15 HOH HOH . D 4 HOH A 15 16 16 HOH HOH . D 4 HOH A 16 17 17 HOH HOH . D 4 HOH A 17 18 18 HOH HOH . D 4 HOH A 18 19 19 HOH HOH . D 4 HOH A 19 20 20 HOH HOH . D 4 HOH A 20 21 21 HOH HOH . D 4 HOH A 21 22 22 HOH HOH . D 4 HOH A 22 23 23 HOH HOH . D 4 HOH A 23 24 24 HOH HOH . D 4 HOH A 24 25 25 HOH HOH . D 4 HOH A 25 26 26 HOH HOH . D 4 HOH A 26 27 27 HOH HOH . D 4 HOH A 27 28 28 HOH HOH . D 4 HOH A 28 29 29 HOH HOH . D 4 HOH A 29 30 30 HOH HOH . D 4 HOH A 30 31 31 HOH HOH . D 4 HOH A 31 32 32 HOH HOH . D 4 HOH A 32 33 33 HOH HOH . D 4 HOH A 33 34 34 HOH HOH . D 4 HOH A 34 35 35 HOH HOH . D 4 HOH A 35 36 36 HOH HOH . D 4 HOH A 36 37 37 HOH HOH . D 4 HOH A 37 924 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 KRL . . . B 2 8.166 -10.187 -15.259 1 72.12 ? C01 KRL 1 A 1 HETATM 2 N N02 KRL . . . B 2 8.968 -10.669 -14.088 1 73.29 ? N02 KRL 1 A 1 HETATM 3 C C03 KRL . . . B 2 8.289 -11.225 -12.91 1 71.45 ? C03 KRL 1 A 1 HETATM 4 C C04 KRL . . . B 2 9.015 -12.324 -12.042 1 63.88 ? C04 KRL 1 A 1 HETATM 5 N N05 KRL . . . B 2 10.44 -12.683 -12.24 1 58.27 ? N05 KRL 1 A 1 HETATM 6 C C06 KRL . . . B 2 11.118 -12.005 -13.381 1 71.28 ? C06 KRL 1 A 1 HETATM 7 C C07 KRL . . . B 2 10.399 -10.92 -14.273 1 70.32 ? C07 KRL 1 A 1 HETATM 8 C C08 KRL . . . B 2 11.089 -13.767 -11.406 1 46.77 ? C08 KRL 1 A 1 HETATM 9 C C09 KRL . . . B 2 11.619 -14.962 -11.914 1 48.26 ? C09 KRL 1 A 1 HETATM 10 C C10 KRL . . . B 2 12.289 -15.93 -11.136 1 40.8 ? C10 KRL 1 A 1 HETATM 11 C C11 KRL . . . B 2 12.506 -15.805 -9.749 1 35.28 ? C11 KRL 1 A 1 HETATM 12 N N12 KRL . . . B 2 13.237 -16.734 -8.905 1 32.51 ? N12 KRL 1 A 1 HETATM 13 C C13 KRL . . . B 2 13.755 -18.027 -9.108 1 38.32 ? C13 KRL 1 A 1 HETATM 14 O O14 KRL . . . B 2 13.583 -18.695 -10.125 1 44.05 ? O14 KRL 1 A 1 HETATM 15 C C15 KRL . . . B 2 14.552 -18.733 -8.03 1 33.74 ? C15 KRL 1 A 1 HETATM 16 C C16 KRL . . . B 2 14.894 -20.065 -7.873 1 28.98 ? C16 KRL 1 A 1 HETATM 17 C C17 KRL . . . B 2 15.648 -20.151 -6.646 1 34.95 ? C17 KRL 1 A 1 HETATM 18 C C18 KRL . . . B 2 15.696 -18.862 -6.151 1 44.67 ? C18 KRL 1 A 1 HETATM 19 C C19 KRL . . . B 2 16.248 -18.208 -5.022 1 46.59 ? C19 KRL 1 A 1 HETATM 20 N N20 KRL . . . B 2 16.685 -17.652 -4.104 1 39.69 ? N20 KRL 1 A 1 HETATM 21 O O21 KRL . . . B 2 15.029 -17.991 -6.983 1 38.31 ? O21 KRL 1 A 1 HETATM 22 C C22 KRL . . . B 2 11.993 -14.589 -9.189 1 38.02 ? C22 KRL 1 A 1 HETATM 23 C C23 KRL . . . B 2 11.316 -13.634 -10.004 1 41.39 ? C23 KRL 1 A 1 HETATM 24 N N24 KRL . . . B 2 12.183 -14.465 -7.729 1 41.87 ? N24 KRL 1 A 1 HETATM 25 C C25 KRL . . . B 2 13.21 -13.453 -7.384 1 44.63 ? C25 KRL 1 A 1 HETATM 26 C C26 KRL . . . B 2 13.506 -13.216 -5.891 1 38.19 ? C26 KRL 1 A 1 HETATM 27 C C27 KRL . . . B 2 12.601 -13.984 -4.944 1 29.61 ? C27 KRL 1 A 1 HETATM 28 C C28 KRL . . . B 2 12.545 -15.433 -5.382 1 30.92 ? C28 KRL 1 A 1 HETATM 29 C C29 KRL . . . B 2 11.77 -15.478 -6.714 1 38.95 ? C29 KRL 1 A 1 HETATM 30 H H01 KRL . . . B 2 7.204 -10.73 -15.341 1 86.54 ? H01 KRL 1 A 1 HETATM 31 H H01A KRL . . . B 2 8.67 -10.401 -16.223 1 86.54 ? H01A KRL 1 A 1 HETATM 32 H H01B KRL . . . B 2 7.885 -9.116 -15.332 1 86.54 ? H01B KRL 1 A 1 HETATM 33 H H03 KRL . . . B 2 7.4 -11.76 -13.332 1 85.74 ? H03 KRL 1 A 1 HETATM 34 H H03A KRL . . . B 2 7.788 -10.432 -12.297 1 85.74 ? H03A KRL 1 A 1 HETATM 35 H H04 KRL . . . B 2 8.295 -13.174 -12.116 1 76.66 ? H04 KRL 1 A 1 HETATM 36 H H04A KRL . . . B 2 9.015 -12.032 -10.971 1 76.66 ? H04A KRL 1 A 1 HETATM 37 H H06 KRL . . . B 2 11.585 -12.751 -14.061 1 85.53 ? H06 KRL 1 A 1 HETATM 38 H H06A KRL . . . B 2 11.975 -11.403 -12.994 1 85.53 ? H06A KRL 1 A 1 HETATM 39 H H07 KRL . . . B 2 10.525 -11.281 -15.324 1 84.39 ? H07 KRL 1 A 1 HETATM 40 H H07A KRL . . . B 2 10.97 -9.951 -14.308 1 84.39 ? H07A KRL 1 A 1 HETATM 41 H H09 KRL . . . B 2 11.511 -15.165 -12.983 1 57.91 ? H09 KRL 1 A 1 HETATM 42 H H10 KRL . . . B 2 12.647 -16.815 -11.67 1 48.96 ? H10 KRL 1 A 1 HETATM 43 H HN12 KRL . . . B 2 13.46 -16.343 -7.991 1 39.02 ? HN12 KRL 1 A 1 HETATM 44 H H16 KRL . . . B 2 14.697 -20.937 -8.486 1 34.78 ? H16 KRL 1 A 1 HETATM 45 H H17 KRL . . . B 2 16.063 -21.072 -6.246 1 41.94 ? H17 KRL 1 A 1 HETATM 46 H H23 KRL . . . B 2 10.942 -12.728 -9.516 1 49.67 ? H23 KRL 1 A 1 HETATM 47 H H25 KRL . . . B 2 12.841 -12.511 -7.851 1 53.56 ? H25 KRL 1 A 1 HETATM 48 H H25A KRL . . . B 2 14.184 -13.669 -7.878 1 53.56 ? H25A KRL 1 A 1 HETATM 49 H H26 KRL . . . B 2 14.574 -13.461 -5.705 1 45.83 ? H26 KRL 1 A 1 HETATM 50 H H26A KRL . . . B 2 13.466 -12.134 -5.65 1 45.83 ? H26A KRL 1 A 1 HETATM 51 H H27 KRL . . . B 2 11.58 -13.551 -4.951 1 35.53 ? H27 KRL 1 A 1 HETATM 52 H H27A KRL . . . B 2 12.929 -13.896 -3.887 1 35.53 ? H27A KRL 1 A 1 HETATM 53 H H28 KRL . . . B 2 13.549 -15.902 -5.43 1 37.11 ? H28 KRL 1 A 1 HETATM 54 H H28A KRL . . . B 2 12.047 -16.042 -4.592 1 37.11 ? H28A KRL 1 A 1 HETATM 55 H H29 KRL . . . B 2 11.763 -16.524 -7.084 1 46.73 ? H29 KRL 1 A 1 HETATM 56 H H29A KRL . . . B 2 10.707 -15.231 -6.464 1 46.73 ? H29A KRL 1 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 56 #