data_3KSP # _model_server_result.job_id pyrDXHC5g15uVPMC7vkNNA _model_server_result.datetime_utc '2025-02-01 09:33:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ksp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":129}' # _entry.id 3KSP # _exptl.entry_id 3KSP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 207.29 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3KSP _cell.length_a 76.226 _cell.length_b 76.226 _cell.length_c 144.157 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KSP _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+5/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -38.113 66.013652 120.130833 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 1 A GLY 0 1_555 A N MSE 2 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale2 A C MSE 2 A MSE 1 1_555 A N GLU 3 A GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 A C LEU 22 A LEU 21 1_555 A N MSE 23 A MSE 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale4 A C MSE 23 A MSE 22 1_555 A N GLU 24 A GLU 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C ALA 29 A ALA 28 1_555 A N MSE 30 A MSE 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale6 A C MSE 30 A MSE 29 1_555 A N HIS 31 A HIS 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale7 A C SER 72 A SER 71 1_555 A N MSE 73 A MSE 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale8 A C MSE 73 A MSE 72 1_555 A N VAL 74 A VAL 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 A C SER 97 A SER 96 1_555 A N MSE 98 A MSE 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale10 A C MSE 98 A MSE 97 1_555 A N TYR 99 A TYR 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? # _chem_comp.formula 'C8 H17 N O3 S' _chem_comp.formula_weight 207.29 _chem_comp.id NHE _chem_comp.mon_nstd_flag . _chem_comp.name '2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-CYCLOHEXYLTAURINE;CHES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3' C2' NHE sing 233 n n C3' C4' NHE sing 234 n n C3' "H3'1" NHE sing 235 n n C3' "H3'2" NHE sing 236 n n C2' C1' NHE sing 237 n n C2' "H2'1" NHE sing 238 n n C2' "H2'2" NHE sing 239 n n C1' C6' NHE sing 240 n n C1' N NHE sing 241 n n C1' "HC'1" NHE sing 242 n n C6' C5' NHE sing 243 n n C6' "H6'1" NHE sing 244 n n C6' "H6'2" NHE sing 245 n n N C1 NHE sing 246 n n N HN NHE sing 247 n n C1 C2 NHE sing 248 n n C1 HC11 NHE sing 249 n n C1 HC12 NHE sing 250 n n C2 S NHE sing 251 n n C2 HC21 NHE sing 252 n n C2 HC22 NHE sing 253 n n S O1 NHE doub 254 n n S O2 NHE doub 255 n n S O3 NHE sing 256 n n O3 HO3 NHE sing 257 n n C5' C4' NHE sing 258 n n C5' "H5'1" NHE sing 259 n n C5' "H5'2" NHE sing 260 n n C4' "H4'1" NHE sing 261 n n C4' "H4'2" NHE sing 262 n n # _atom_sites.entry_id 3KSP _atom_sites.fract_transf_matrix[1][1] 0.013119 _atom_sites.fract_transf_matrix[1][2] 0.007574 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015148 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006937 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NHE A 1 129 1 NHE NHE . C 3 EDO A 1 130 2 EDO EDO . D 4 HOH A 1 131 3 HOH HOH . D 4 HOH A 2 132 4 HOH HOH . D 4 HOH A 3 133 5 HOH HOH . D 4 HOH A 4 134 6 HOH HOH . D 4 HOH A 5 135 7 HOH HOH . D 4 HOH A 6 136 8 HOH HOH . D 4 HOH A 7 137 9 HOH HOH . D 4 HOH A 8 138 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3' NHE . . . B 2 13.675 35.114 59.052 1 82.82 ? C3' NHE 129 A 1 HETATM 2 C C2' NHE . . . B 2 13.43 36.615 59.246 1 81.48 ? C2' NHE 129 A 1 HETATM 3 C C1' NHE . . . B 2 13.298 37.37 57.915 1 81.49 ? C1' NHE 129 A 1 HETATM 4 C C6' NHE . . . B 2 12.852 36.46 56.77 1 82.65 ? C6' NHE 129 A 1 HETATM 5 N N NHE . . . B 2 12.399 38.5 58.078 1 80.41 ? N NHE 129 A 1 HETATM 6 C C1 NHE . . . B 2 12.881 39.502 58.989 1 79.32 ? C1 NHE 129 A 1 HETATM 7 C C2 NHE . . . B 2 12.336 40.864 58.696 1 78.96 ? C2 NHE 129 A 1 HETATM 8 S S NHE . . . B 2 11.583 41.366 60.065 1 77.49 ? S NHE 129 A 1 HETATM 9 O O1 NHE . . . B 2 10.409 40.474 60.086 1 77.59 ? O1 NHE 129 A 1 HETATM 10 O O2 NHE . . . B 2 11.312 42.846 59.991 1 76.38 ? O2 NHE 129 A 1 HETATM 11 O O3 NHE . . . B 2 12.445 41.154 61.245 1 78.64 ? O3 NHE 129 A 1 HETATM 12 C C5' NHE . . . B 2 13.94 35.404 56.5 1 83.45 ? C5' NHE 129 A 1 HETATM 13 C C4' NHE . . . B 2 14.508 34.809 57.802 1 83.75 ? C4' NHE 129 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #