data_3KSW # _model_server_result.job_id sqVICU8Zgjj48uids5rh3w _model_server_result.datetime_utc '2024-11-30 11:45:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ksw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":490}' # _entry.id 3KSW # _exptl.entry_id 3KSW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 401.888 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4'-chloro-N-[(1R)-2-(1H-imidazol-1-yl)-1-phenylethyl]biphenyl-4-carboxamide" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3KSW _cell.length_a 66.468 _cell.length_b 66.468 _cell.length_c 234.281 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KSW _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 393 A CYS 422 1_555 B FE HEM . A HEM 488 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? metalc ? metalc2 B FE HEM . A HEM 488 1_555 C NAT VNF . A VNF 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.879 ? # _chem_comp.formula 'C24 H20 Cl N3 O' _chem_comp.formula_weight 401.888 _chem_comp.id VNF _chem_comp.mon_nstd_flag . _chem_comp.name "4'-chloro-N-[(1R)-2-(1H-imidazol-1-yl)-1-phenylethyl]biphenyl-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAV OAA VNF doub 456 n n CLAB CAW VNF sing 457 n n CAE CAC VNF doub 458 n y CAD CAC VNF sing 459 n y CAC HAC VNF sing 460 n n CAG CAD VNF doub 461 n y CAD HAD VNF sing 462 n n CAH CAE VNF sing 463 n y CAE HAE VNF sing 464 n n NAT CAF VNF sing 465 n y CAF CAQ VNF doub 466 n y CAF HAF VNF sing 467 n n CBA CAG VNF sing 468 n y CAG HAG VNF sing 469 n n CBA CAH VNF doub 470 n y CAH HAH VNF sing 471 n n CAW CAI VNF doub 472 n y CAI CAM VNF sing 473 n y CAI HAI VNF sing 474 n n CAW CAJ VNF sing 475 n y CAJ CAN VNF doub 476 n y CAJ HAJ VNF sing 477 n n CAO CAK VNF doub 478 n y CAK CAX VNF sing 479 n y CAK HAK VNF sing 480 n n CAP CAL VNF sing 481 n y CAX CAL VNF doub 482 n y CAL HAL VNF sing 483 n n CAM CAY VNF doub 484 n y CAM HAM VNF sing 485 n n CAN CAY VNF sing 486 n y CAN HAN VNF sing 487 n n CAO CAZ VNF sing 488 n y CAO HAO VNF sing 489 n n CAZ CAP VNF doub 490 n y CAP HAP VNF sing 491 n n CAQ NBC VNF sing 492 n y CAQ HAQ VNF sing 493 n n NAT CAR VNF doub 494 n y CAR NBC VNF sing 495 n y CAR HAR VNF sing 496 n n NBC CAS VNF sing 497 n n CBB CAS VNF sing 498 n n CAS HAS VNF sing 499 n n CAS HASA VNF sing 500 n n NAU CBB VNF sing 501 n n NAU CAV VNF sing 502 n n NAU HNAU VNF sing 503 n n CAX CAV VNF sing 504 n n CAY CAZ VNF sing 505 n y CBB CBA VNF sing 506 n n CBB HBB VNF sing 507 n n # _atom_sites.entry_id 3KSW _atom_sites.fract_transf_matrix[1][1] 0.015045 _atom_sites.fract_transf_matrix[1][2] 0.008686 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017372 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004268 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 488 488 HEM HEM . C 3 VNF A 1 490 490 VNF VNF . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAA VNF . . . C 3 2.48 26.996 22.191 1 128.22 ? OAA VNF 490 A 1 HETATM 2 CL CLAB VNF . . . C 3 -4.303 32.755 15.854 1 133.45 ? CLAB VNF 490 A 1 HETATM 3 C CAC VNF . . . C 3 2.516 23.305 24.349 1 136.59 ? CAC VNF 490 A 1 HETATM 4 C CAD VNF . . . C 3 3.725 23.993 24.346 1 137.03 ? CAD VNF 490 A 1 HETATM 5 C CAE VNF . . . C 3 1.776 23.194 23.176 1 135.2 ? CAE VNF 490 A 1 HETATM 6 C CAF VNF . . . C 3 6.976 27.536 18.324 1 99.43 ? CAF VNF 490 A 1 HETATM 7 C CAG VNF . . . C 3 4.196 24.571 23.171 1 133.67 ? CAG VNF 490 A 1 HETATM 8 C CAH VNF . . . C 3 2.246 23.771 22.001 1 132.46 ? CAH VNF 490 A 1 HETATM 9 C CAI VNF . . . C 3 -2.14 32.362 17.433 1 129.71 ? CAI VNF 490 A 1 HETATM 10 C CAJ VNF . . . C 3 -3.348 30.385 16.769 1 129.41 ? CAJ VNF 490 A 1 HETATM 11 C CAK VNF . . . C 3 0.367 27.221 19.42 1 129.31 ? CAK VNF 490 A 1 HETATM 12 C CAL VNF . . . C 3 1.38 29.185 20.383 1 126.39 ? CAL VNF 490 A 1 HETATM 13 C CAM VNF . . . C 3 -1.246 31.572 18.146 1 130.12 ? CAM VNF 490 A 1 HETATM 14 C CAN VNF . . . C 3 -2.454 29.595 17.483 1 128.25 ? CAN VNF 490 A 1 HETATM 15 C CAO VNF . . . C 3 -0.544 28.018 18.738 1 131.03 ? CAO VNF 490 A 1 HETATM 16 C CAP VNF . . . C 3 0.468 29.983 19.699 1 129.07 ? CAP VNF 490 A 1 HETATM 17 C CAQ VNF . . . C 3 6.794 27.274 19.617 1 106.63 ? CAQ VNF 490 A 1 HETATM 18 C CAR VNF . . . C 3 5.4 26.061 18.467 1 106.04 ? CAR VNF 490 A 1 HETATM 19 C CAS VNF . . . C 3 5.301 25.796 20.936 1 112.53 ? CAS VNF 490 A 1 HETATM 20 N NAT VNF . . . C 3 6.121 26.793 17.621 1 101.1 ? NAT VNF 490 A 1 HETATM 21 N NAU VNF . . . C 3 2.966 26.047 20.191 1 123.22 ? NAU VNF 490 A 1 HETATM 22 C CAV VNF . . . C 3 2.317 26.904 20.977 1 125.18 ? CAV VNF 490 A 1 HETATM 23 C CAW VNF . . . C 3 -3.192 31.768 16.744 1 130.81 ? CAW VNF 490 A 1 HETATM 24 C CAX VNF . . . C 3 1.325 27.802 20.242 1 126.49 ? CAX VNF 490 A 1 HETATM 25 C CAY VNF . . . C 3 -1.406 30.189 18.179 1 130.08 ? CAY VNF 490 A 1 HETATM 26 C CAZ VNF . . . C 3 -0.499 29.4 18.881 1 130.52 ? CAZ VNF 490 A 1 HETATM 27 C CBA VNF . . . C 3 3.455 24.459 21.997 1 129.54 ? CBA VNF 490 A 1 HETATM 28 C CBB VNF . . . C 3 3.963 25.089 20.697 1 122 ? CBB VNF 490 A 1 HETATM 29 N NBC VNF . . . C 3 5.825 26.369 19.688 1 109.09 ? NBC VNF 490 A 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 29 #