data_3KSZ # _model_server_result.job_id lGoiIpfQOBuaLvefx0IJSA _model_server_result.datetime_utc '2024-11-27 04:15:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ksz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":337}' # _entry.id 3KSZ # _exptl.entry_id 3KSZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 186.057 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-PHOSPHOGLYCERIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.61 _cell.angle_gamma 90 _cell.entry_id 3KSZ _cell.length_a 67.872 _cell.length_b 93.596 _cell.length_c 89.884 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KSZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C3 H7 O7 P' _chem_comp.formula_weight 186.057 _chem_comp.id 3PG _chem_comp.mon_nstd_flag . _chem_comp.name '3-PHOSPHOGLYCERIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 3PG doub 1 n n C1 O2 3PG sing 2 n n C1 C2 3PG sing 3 n n O2 HO2 3PG sing 4 n n C2 O3 3PG sing 5 n n C2 C3 3PG sing 6 n n C2 H2 3PG sing 7 n n O3 HO3 3PG sing 8 n n C3 O1P 3PG sing 9 n n C3 H31 3PG sing 10 n n C3 H32 3PG sing 11 n n O1P P 3PG sing 12 n n P O2P 3PG doub 13 n n P O3P 3PG sing 14 n n P O4P 3PG sing 15 n n O3P HOP3 3PG sing 16 n n O4P HOP4 3PG sing 17 n n # _atom_sites.entry_id 3KSZ _atom_sites.fract_transf_matrix[1][1] 0.014734 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004677 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010684 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011672 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NAD O 1 0 0 NAD NAD . F 3 3PG O 1 337 337 3PG 3PG . G 2 NAD P 1 0 0 NAD NAD . H 3 3PG P 1 337 337 3PG 3PG . I 2 NAD R 1 0 0 NAD NAD . J 3 3PG R 1 337 337 3PG 3PG . K 2 NAD Q 1 0 0 NAD NAD . L 3 3PG Q 1 337 337 3PG 3PG . M 4 HOH O 1 338 338 HOH HOH . M 4 HOH O 2 339 339 HOH HOH . M 4 HOH O 3 340 340 HOH HOH . M 4 HOH O 4 341 341 HOH HOH . M 4 HOH O 5 342 342 HOH HOH . M 4 HOH O 6 343 343 HOH HOH . M 4 HOH O 7 344 344 HOH HOH . M 4 HOH O 8 345 345 HOH HOH . M 4 HOH O 9 346 346 HOH HOH . M 4 HOH O 10 347 347 HOH HOH . M 4 HOH O 11 348 348 HOH HOH . M 4 HOH O 12 349 349 HOH HOH . M 4 HOH O 13 350 350 HOH HOH . M 4 HOH O 14 351 351 HOH HOH . M 4 HOH O 15 352 352 HOH HOH . M 4 HOH O 16 353 353 HOH HOH . M 4 HOH O 17 354 354 HOH HOH . M 4 HOH O 18 355 355 HOH HOH . M 4 HOH O 19 356 356 HOH HOH . M 4 HOH O 20 357 357 HOH HOH . M 4 HOH O 21 358 358 HOH HOH . M 4 HOH O 22 359 359 HOH HOH . M 4 HOH O 23 360 360 HOH HOH . M 4 HOH O 24 361 361 HOH HOH . M 4 HOH O 25 362 362 HOH HOH . M 4 HOH O 26 363 363 HOH HOH . N 4 HOH P 1 338 338 HOH HOH . N 4 HOH P 2 339 339 HOH HOH . N 4 HOH P 3 340 340 HOH HOH . N 4 HOH P 4 341 341 HOH HOH . N 4 HOH P 5 342 342 HOH HOH . N 4 HOH P 6 343 343 HOH HOH . N 4 HOH P 7 344 344 HOH HOH . N 4 HOH P 8 345 345 HOH HOH . N 4 HOH P 9 346 346 HOH HOH . N 4 HOH P 10 347 347 HOH HOH . N 4 HOH P 11 348 348 HOH HOH . N 4 HOH P 12 349 349 HOH HOH . N 4 HOH P 13 350 350 HOH HOH . N 4 HOH P 14 351 351 HOH HOH . N 4 HOH P 15 352 352 HOH HOH . N 4 HOH P 16 353 353 HOH HOH . N 4 HOH P 17 354 354 HOH HOH . N 4 HOH P 18 355 355 HOH HOH . N 4 HOH P 19 356 356 HOH HOH . N 4 HOH P 20 357 357 HOH HOH . N 4 HOH P 21 358 358 HOH HOH . N 4 HOH P 22 359 359 HOH HOH . N 4 HOH P 23 360 360 HOH HOH . N 4 HOH P 24 361 361 HOH HOH . N 4 HOH P 25 362 362 HOH HOH . N 4 HOH P 26 363 363 HOH HOH . N 4 HOH P 27 364 364 HOH HOH . N 4 HOH P 28 365 365 HOH HOH . N 4 HOH P 29 366 366 HOH HOH . N 4 HOH P 30 367 367 HOH HOH . N 4 HOH P 31 368 368 HOH HOH . N 4 HOH P 32 369 369 HOH HOH . O 4 HOH R 1 338 338 HOH HOH . O 4 HOH R 2 339 339 HOH HOH . O 4 HOH R 3 340 340 HOH HOH . O 4 HOH R 4 341 341 HOH HOH . O 4 HOH R 5 342 342 HOH HOH . O 4 HOH R 6 343 343 HOH HOH . O 4 HOH R 7 344 344 HOH HOH . O 4 HOH R 8 345 345 HOH HOH . O 4 HOH R 9 346 346 HOH HOH . O 4 HOH R 10 347 347 HOH HOH . O 4 HOH R 11 348 348 HOH HOH . O 4 HOH R 12 349 349 HOH HOH . O 4 HOH R 13 350 350 HOH HOH . O 4 HOH R 14 351 351 HOH HOH . O 4 HOH R 15 352 352 HOH HOH . O 4 HOH R 16 353 353 HOH HOH . O 4 HOH R 17 354 354 HOH HOH . O 4 HOH R 18 355 355 HOH HOH . P 4 HOH Q 1 338 338 HOH HOH . P 4 HOH Q 2 339 339 HOH HOH . P 4 HOH Q 3 340 340 HOH HOH . P 4 HOH Q 4 341 341 HOH HOH . P 4 HOH Q 5 342 342 HOH HOH . P 4 HOH Q 6 343 343 HOH HOH . P 4 HOH Q 7 344 344 HOH HOH . P 4 HOH Q 8 345 345 HOH HOH . P 4 HOH Q 9 346 346 HOH HOH . P 4 HOH Q 10 347 347 HOH HOH . P 4 HOH Q 11 348 348 HOH HOH . P 4 HOH Q 12 349 349 HOH HOH . P 4 HOH Q 13 350 350 HOH HOH . P 4 HOH Q 14 351 351 HOH HOH . P 4 HOH Q 15 352 352 HOH HOH . P 4 HOH Q 16 353 353 HOH HOH . P 4 HOH Q 17 354 354 HOH HOH . P 4 HOH Q 18 355 355 HOH HOH . P 4 HOH Q 19 356 356 HOH HOH . P 4 HOH Q 20 357 357 HOH HOH . P 4 HOH Q 21 358 358 HOH HOH . P 4 HOH Q 22 359 359 HOH HOH . P 4 HOH Q 23 360 360 HOH HOH . P 4 HOH Q 24 361 361 HOH HOH . P 4 HOH Q 25 362 362 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 3PG . . . L 3 20.247 -22.688 40.669 1 52.79 ? C1 3PG 337 Q 1 HETATM 2 O O1 3PG . . . L 3 21.013 -21.798 41.434 1 57.76 ? O1 3PG 337 Q 1 HETATM 3 O O2 3PG . . . L 3 19.42 -23.215 41.711 1 38.38 ? O2 3PG 337 Q 1 HETATM 4 C C2 3PG . . . L 3 21.219 -23.686 39.846 1 58.48 ? C2 3PG 337 Q 1 HETATM 5 O O3 3PG . . . L 3 22.579 -23.148 39.826 1 40.5 ? O3 3PG 337 Q 1 HETATM 6 C C3 3PG . . . L 3 20.793 -24.079 38.344 1 62.84 ? C3 3PG 337 Q 1 HETATM 7 O O1P 3PG . . . L 3 21.256 -25.453 37.8 1 69.26 ? O1P 3PG 337 Q 1 HETATM 8 P P 3PG . . . L 3 20.4 -26.586 36.74 1 71.39 ? P 3PG 337 Q 1 HETATM 9 O O2P 3PG . . . L 3 21.343 -27.063 35.521 1 68.16 ? O2P 3PG 337 Q 1 HETATM 10 O O3P 3PG . . . L 3 19.798 -27.757 37.413 1 70.74 ? O3P 3PG 337 Q 1 HETATM 11 O O4P 3PG . . . L 3 19.283 -25.784 35.94 1 77.01 ? O4P 3PG 337 Q 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 718 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 11 #