data_3KT0 # _model_server_result.job_id q6ijy5c9kuG2vbVHe-VJcA _model_server_result.datetime_utc '2024-11-23 03:29:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kt0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":439}' # _entry.id 3KT0 # _exptl.entry_id 3KT0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 205.295 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-1-{[(2S)-3-(2-methoxyethoxy)-2-methylpropyl]oxy}propan-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KT0 _cell.length_a 55.912 _cell.length_b 55.912 _cell.length_c 313.784 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KT0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H23 N O3' _chem_comp.formula_weight 205.295 _chem_comp.id EMN _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-1-{[(2S)-3-(2-methoxyethoxy)-2-methylpropyl]oxy}propan-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA OAJ EMN sing 83 n n CAB CAM EMN sing 84 n n CAC CAN EMN sing 85 n n NAD CAM EMN sing 86 n n CAE CAF EMN sing 87 n n CAE OAJ EMN sing 88 n n CAF OAK EMN sing 89 n n CAG OAL EMN sing 90 n n CAG CAM EMN sing 91 n n CAH OAK EMN sing 92 n n CAH CAN EMN sing 93 n n CAI OAL EMN sing 94 n n CAI CAN EMN sing 95 n n CAA HAA EMN sing 96 n n CAA HAAA EMN sing 97 n n CAA HAAB EMN sing 98 n n CAB HAB EMN sing 99 n n CAB HABA EMN sing 100 n n CAB HABB EMN sing 101 n n CAC HAC EMN sing 102 n n CAC HACA EMN sing 103 n n CAC HACB EMN sing 104 n n NAD HNAD EMN sing 105 n n NAD HNAA EMN sing 106 n n CAE HAE EMN sing 107 n n CAE HAEA EMN sing 108 n n CAF HAF EMN sing 109 n n CAF HAFA EMN sing 110 n n CAG HAG EMN sing 111 n n CAG HAGA EMN sing 112 n n CAH HAH EMN sing 113 n n CAH HAHA EMN sing 114 n n CAI HAI EMN sing 115 n n CAI HAIA EMN sing 116 n n CAM HAM EMN sing 117 n n CAN HAN EMN sing 118 n n # _atom_sites.entry_id 3KT0 _atom_sites.fract_transf_matrix[1][1] 0.017885 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017885 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003187 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EMN A 1 439 1 EMN EMN . C 3 HOH A 1 440 1 HOH HOH . C 3 HOH A 2 441 2 HOH HOH . C 3 HOH A 3 442 3 HOH HOH . C 3 HOH A 4 443 4 HOH HOH . C 3 HOH A 5 444 5 HOH HOH . C 3 HOH A 6 445 6 HOH HOH . C 3 HOH A 7 446 7 HOH HOH . C 3 HOH A 8 447 8 HOH HOH . C 3 HOH A 9 448 9 HOH HOH . C 3 HOH A 10 449 10 HOH HOH . C 3 HOH A 11 450 11 HOH HOH . C 3 HOH A 12 451 12 HOH HOH . C 3 HOH A 13 452 13 HOH HOH . C 3 HOH A 14 453 14 HOH HOH . C 3 HOH A 15 454 15 HOH HOH . C 3 HOH A 16 455 16 HOH HOH . C 3 HOH A 17 456 17 HOH HOH . C 3 HOH A 18 457 18 HOH HOH . C 3 HOH A 19 458 19 HOH HOH . C 3 HOH A 20 459 20 HOH HOH . C 3 HOH A 21 460 21 HOH HOH . C 3 HOH A 22 461 22 HOH HOH . C 3 HOH A 23 462 23 HOH HOH . C 3 HOH A 24 463 24 HOH HOH . C 3 HOH A 25 464 25 HOH HOH . C 3 HOH A 26 465 26 HOH HOH . C 3 HOH A 27 466 27 HOH HOH . C 3 HOH A 28 467 28 HOH HOH . C 3 HOH A 29 468 29 HOH HOH . C 3 HOH A 30 469 30 HOH HOH . C 3 HOH A 31 470 31 HOH HOH . C 3 HOH A 32 471 32 HOH HOH . C 3 HOH A 33 472 33 HOH HOH . C 3 HOH A 34 473 34 HOH HOH . C 3 HOH A 35 474 35 HOH HOH . C 3 HOH A 36 475 36 HOH HOH . C 3 HOH A 37 476 37 HOH HOH . C 3 HOH A 38 477 38 HOH HOH . C 3 HOH A 39 478 39 HOH HOH . C 3 HOH A 40 479 40 HOH HOH . C 3 HOH A 41 480 41 HOH HOH . C 3 HOH A 42 481 42 HOH HOH . C 3 HOH A 43 482 43 HOH HOH . C 3 HOH A 44 483 44 HOH HOH . C 3 HOH A 45 484 45 HOH HOH . C 3 HOH A 46 485 46 HOH HOH . C 3 HOH A 47 486 47 HOH HOH . C 3 HOH A 48 487 48 HOH HOH . C 3 HOH A 49 488 49 HOH HOH . C 3 HOH A 50 489 50 HOH HOH . C 3 HOH A 51 490 51 HOH HOH . C 3 HOH A 52 491 52 HOH HOH . C 3 HOH A 53 492 53 HOH HOH . C 3 HOH A 54 493 54 HOH HOH . C 3 HOH A 55 494 55 HOH HOH . C 3 HOH A 56 495 56 HOH HOH . C 3 HOH A 57 496 57 HOH HOH . C 3 HOH A 58 497 58 HOH HOH . C 3 HOH A 59 498 59 HOH HOH . C 3 HOH A 60 499 60 HOH HOH . C 3 HOH A 61 500 61 HOH HOH . C 3 HOH A 62 501 62 HOH HOH . C 3 HOH A 63 502 63 HOH HOH . C 3 HOH A 64 503 64 HOH HOH . C 3 HOH A 65 504 65 HOH HOH . C 3 HOH A 66 505 66 HOH HOH . C 3 HOH A 67 506 67 HOH HOH . C 3 HOH A 68 507 68 HOH HOH . C 3 HOH A 69 508 69 HOH HOH . C 3 HOH A 70 509 70 HOH HOH . C 3 HOH A 71 510 71 HOH HOH . C 3 HOH A 72 511 72 HOH HOH . C 3 HOH A 73 512 73 HOH HOH . C 3 HOH A 74 513 74 HOH HOH . C 3 HOH A 75 514 75 HOH HOH . C 3 HOH A 76 515 76 HOH HOH . C 3 HOH A 77 516 77 HOH HOH . C 3 HOH A 78 517 78 HOH HOH . C 3 HOH A 79 518 79 HOH HOH . C 3 HOH A 80 519 80 HOH HOH . C 3 HOH A 81 520 81 HOH HOH . C 3 HOH A 82 521 82 HOH HOH . C 3 HOH A 83 522 83 HOH HOH . C 3 HOH A 84 523 84 HOH HOH . C 3 HOH A 85 524 85 HOH HOH . C 3 HOH A 86 525 86 HOH HOH . C 3 HOH A 87 526 87 HOH HOH . C 3 HOH A 88 527 88 HOH HOH . C 3 HOH A 89 528 89 HOH HOH . C 3 HOH A 90 529 90 HOH HOH . C 3 HOH A 91 530 91 HOH HOH . C 3 HOH A 92 531 92 HOH HOH . C 3 HOH A 93 532 93 HOH HOH . C 3 HOH A 94 533 94 HOH HOH . C 3 HOH A 95 534 95 HOH HOH . C 3 HOH A 96 535 96 HOH HOH . C 3 HOH A 97 536 97 HOH HOH . C 3 HOH A 98 537 98 HOH HOH . C 3 HOH A 99 538 99 HOH HOH . C 3 HOH A 100 539 100 HOH HOH . C 3 HOH A 101 540 101 HOH HOH . C 3 HOH A 102 541 102 HOH HOH . C 3 HOH A 103 542 103 HOH HOH . C 3 HOH A 104 543 104 HOH HOH . C 3 HOH A 105 544 105 HOH HOH . C 3 HOH A 106 545 106 HOH HOH . C 3 HOH A 107 546 107 HOH HOH . C 3 HOH A 108 547 108 HOH HOH . C 3 HOH A 109 548 109 HOH HOH . C 3 HOH A 110 549 110 HOH HOH . C 3 HOH A 111 550 111 HOH HOH . C 3 HOH A 112 551 112 HOH HOH . C 3 HOH A 113 552 113 HOH HOH . C 3 HOH A 114 553 114 HOH HOH . C 3 HOH A 115 554 115 HOH HOH . C 3 HOH A 116 555 116 HOH HOH . C 3 HOH A 117 556 117 HOH HOH . C 3 HOH A 118 557 118 HOH HOH . C 3 HOH A 119 558 119 HOH HOH . C 3 HOH A 120 559 120 HOH HOH . C 3 HOH A 121 560 121 HOH HOH . C 3 HOH A 122 561 122 HOH HOH . C 3 HOH A 123 562 123 HOH HOH . C 3 HOH A 124 563 124 HOH HOH . C 3 HOH A 125 564 125 HOH HOH . C 3 HOH A 126 565 126 HOH HOH . C 3 HOH A 127 566 127 HOH HOH . C 3 HOH A 128 567 128 HOH HOH . C 3 HOH A 129 568 129 HOH HOH . C 3 HOH A 130 569 130 HOH HOH . C 3 HOH A 131 570 131 HOH HOH . C 3 HOH A 132 571 132 HOH HOH . C 3 HOH A 133 572 133 HOH HOH . C 3 HOH A 134 573 134 HOH HOH . C 3 HOH A 135 574 135 HOH HOH . C 3 HOH A 136 575 136 HOH HOH . C 3 HOH A 137 576 137 HOH HOH . C 3 HOH A 138 577 138 HOH HOH . C 3 HOH A 139 578 139 HOH HOH . C 3 HOH A 140 579 140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA EMN . . . B 2 30.519 29.113 22.778 0.8 50.02 ? CAA EMN 439 A 1 HETATM 2 C CAB EMN . . . B 2 33.173 32.032 13.916 0.8 50.66 ? CAB EMN 439 A 1 HETATM 3 C CAC EMN . . . B 2 30.009 27.699 15.329 0.8 48.46 ? CAC EMN 439 A 1 HETATM 4 N NAD EMN . . . B 2 33.37 33.569 15.8 0.8 50.59 ? NAD EMN 439 A 1 HETATM 5 C CAE EMN . . . B 2 29.203 28.696 20.844 0.8 49.97 ? CAE EMN 439 A 1 HETATM 6 C CAF EMN . . . B 2 28.954 29.596 19.634 0.8 49.66 ? CAF EMN 439 A 1 HETATM 7 C CAG EMN . . . B 2 32.39 31.411 16.235 0.8 50.8 ? CAG EMN 439 A 1 HETATM 8 C CAH EMN . . . B 2 29.531 29.081 17.375 0.8 49.02 ? CAH EMN 439 A 1 HETATM 9 C CAI EMN . . . B 2 31.823 29.136 16.295 0.8 49.7 ? CAI EMN 439 A 1 HETATM 10 O OAJ EMN . . . B 2 30.522 28.893 21.365 0.8 49.4 ? OAJ EMN 439 A 1 HETATM 11 O OAK EMN . . . B 2 30.003 29.373 18.69 0.8 48.81 ? OAK EMN 439 A 1 HETATM 12 O OAL EMN . . . B 2 31.464 30.423 15.782 0.8 50.3 ? OAL EMN 439 A 1 HETATM 13 C CAM EMN . . . B 2 32.543 32.529 15.215 0.8 50.62 ? CAM EMN 439 A 1 HETATM 14 C CAN EMN . . . B 2 30.589 28.288 16.606 0.8 48.8 ? CAN EMN 439 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 14 #