data_3KT6
#
_model_server_result.job_id            5A_ceFsaJlYlOLsOaqeHBQ 
_model_server_result.datetime_utc      '2024-11-02 11:29:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3kt6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":500}' 
#
_entry.id    3KT6 
#
_exptl.entry_id    3KT6 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              204.225 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            TRYPTOPHAN 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3KT6 
_cell.length_a            252.655 
_cell.length_b            252.655 
_cell.length_c            111.805 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3KT6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,L,T,U 1 1 
C,D,M,N,O,P,Q,R,S,V,W 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 J N N 
? 2 M N N 
? 2 Q N N 
#
_chem_comp.formula           'C11 H12 N2 O2' 
_chem_comp.formula_weight    204.225 
_chem_comp.id                TRP 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              TRYPTOPHAN 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA TRP sing 310 n n 
N H TRP sing 311 n n 
N H2 TRP sing 312 n n 
CA C TRP sing 313 n n 
CA CB TRP sing 314 n n 
CA HA TRP sing 315 n n 
C O TRP doub 316 n n 
C OXT TRP sing 317 n n 
CB CG TRP sing 318 n n 
CB HB2 TRP sing 319 n n 
CB HB3 TRP sing 320 n n 
CG CD1 TRP doub 321 n y 
CG CD2 TRP sing 322 n y 
CD1 NE1 TRP sing 323 n y 
CD1 HD1 TRP sing 324 n n 
CD2 CE2 TRP doub 325 n y 
CD2 CE3 TRP sing 326 n y 
NE1 CE2 TRP sing 327 n y 
NE1 HE1 TRP sing 328 n n 
CE2 CZ2 TRP sing 329 n y 
CE3 CZ3 TRP doub 330 n y 
CE3 HE3 TRP sing 331 n n 
CZ2 CH2 TRP doub 332 n y 
CZ2 HZ2 TRP sing 333 n n 
CZ3 CH2 TRP sing 334 n y 
CZ3 HZ3 TRP sing 335 n n 
CH2 HH2 TRP sing 336 n n 
OXT HXT TRP sing 337 n n 
#
_atom_sites.entry_id                     3KT6 
_atom_sites.fract_transf_matrix[1][1]    0.003958 
_atom_sites.fract_transf_matrix[1][2]    0.002285 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00457 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008944 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 TRP A 1 500 500 TRP TRP . 
F 3 SO4 A 1 703 703 SO4 SO4 . 
G 3 SO4 A 1 501 501 SO4 SO4 . 
H 3 SO4 A 1 502 502 SO4 SO4 . 
I 3 SO4 A 1 503 503 SO4 SO4 . 
J 2 TRP B 1 700 700 TRP TRP . 
K 3 SO4 B 1 701 701 SO4 SO4 . 
L 3 SO4 B 1 702 702 SO4 SO4 . 
M 2 TRP C 1 600 600 TRP TRP . 
N 3 SO4 C 1 601 601 SO4 SO4 . 
O 3 SO4 C 1 602 602 SO4 SO4 . 
P 3 SO4 C 1 603 603 SO4 SO4 . 
Q 2 TRP D 1 800 800 TRP TRP . 
R 3 SO4 D 1 801 801 SO4 SO4 . 
S 3 SO4 D 1 802 802 SO4 SO4 . 
T 4 HOH A 1 504 504 HOH HOH . 
T 4 HOH A 2 505 505 HOH HOH . 
T 4 HOH A 3 506 506 HOH HOH . 
T 4 HOH A 4 507 507 HOH HOH . 
T 4 HOH A 5 508 508 HOH HOH . 
T 4 HOH A 6 509 509 HOH HOH . 
T 4 HOH A 7 510 510 HOH HOH . 
T 4 HOH A 8 511 511 HOH HOH . 
T 4 HOH A 9 512 512 HOH HOH . 
T 4 HOH A 10 513 513 HOH HOH . 
T 4 HOH A 11 514 514 HOH HOH . 
T 4 HOH A 12 515 515 HOH HOH . 
T 4 HOH A 13 516 516 HOH HOH . 
T 4 HOH A 14 517 517 HOH HOH . 
T 4 HOH A 15 518 518 HOH HOH . 
T 4 HOH A 16 519 519 HOH HOH . 
T 4 HOH A 17 520 520 HOH HOH . 
T 4 HOH A 18 521 521 HOH HOH . 
T 4 HOH A 19 522 522 HOH HOH . 
T 4 HOH A 20 523 523 HOH HOH . 
T 4 HOH A 21 524 524 HOH HOH . 
T 4 HOH A 22 525 525 HOH HOH . 
T 4 HOH A 23 526 526 HOH HOH . 
T 4 HOH A 24 527 527 HOH HOH . 
T 4 HOH A 25 710 710 HOH HOH . 
U 4 HOH B 1 704 704 HOH HOH . 
U 4 HOH B 2 705 705 HOH HOH . 
U 4 HOH B 3 706 706 HOH HOH . 
U 4 HOH B 4 707 707 HOH HOH . 
U 4 HOH B 5 708 708 HOH HOH . 
U 4 HOH B 6 709 709 HOH HOH . 
U 4 HOH B 7 711 711 HOH HOH . 
U 4 HOH B 8 712 712 HOH HOH . 
U 4 HOH B 9 713 713 HOH HOH . 
U 4 HOH B 10 714 714 HOH HOH . 
U 4 HOH B 11 715 715 HOH HOH . 
U 4 HOH B 12 716 716 HOH HOH . 
U 4 HOH B 13 717 717 HOH HOH . 
U 4 HOH B 14 718 718 HOH HOH . 
U 4 HOH B 15 719 719 HOH HOH . 
U 4 HOH B 16 720 720 HOH HOH . 
U 4 HOH B 17 721 721 HOH HOH . 
U 4 HOH B 18 722 722 HOH HOH . 
U 4 HOH B 19 723 723 HOH HOH . 
U 4 HOH B 20 724 724 HOH HOH . 
V 4 HOH C 1 604 604 HOH HOH . 
V 4 HOH C 2 605 605 HOH HOH . 
V 4 HOH C 3 606 606 HOH HOH . 
V 4 HOH C 4 607 607 HOH HOH . 
V 4 HOH C 5 608 608 HOH HOH . 
V 4 HOH C 6 609 609 HOH HOH . 
V 4 HOH C 7 610 610 HOH HOH . 
V 4 HOH C 8 611 611 HOH HOH . 
V 4 HOH C 9 612 612 HOH HOH . 
V 4 HOH C 10 613 613 HOH HOH . 
V 4 HOH C 11 614 614 HOH HOH . 
V 4 HOH C 12 615 615 HOH HOH . 
V 4 HOH C 13 616 616 HOH HOH . 
V 4 HOH C 14 617 617 HOH HOH . 
V 4 HOH C 15 618 618 HOH HOH . 
V 4 HOH C 16 619 619 HOH HOH . 
V 4 HOH C 17 803 803 HOH HOH . 
W 4 HOH D 1 804 804 HOH HOH . 
W 4 HOH D 2 805 805 HOH HOH . 
W 4 HOH D 3 806 806 HOH HOH . 
W 4 HOH D 4 807 807 HOH HOH . 
W 4 HOH D 5 808 808 HOH HOH . 
W 4 HOH D 6 809 809 HOH HOH . 
W 4 HOH D 7 810 810 HOH HOH . 
W 4 HOH D 8 811 811 HOH HOH . 
W 4 HOH D 9 812 812 HOH HOH . 
W 4 HOH D 10 813 813 HOH HOH . 
W 4 HOH D 11 814 814 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N TRP . . . E 2 -152.836 21.504 -27.134 1 61.26 ? N TRP 500 A 1 
HETATM 2 C CA TRP . . . E 2 -152.947 22.876 -26.649 1 61.04 ? CA TRP 500 A 1 
HETATM 3 C C TRP . . . E 2 -152.367 23.887 -27.638 1 61.85 ? C TRP 500 A 1 
HETATM 4 O O TRP . . . E 2 -151.606 23.541 -28.54 1 62.23 ? O TRP 500 A 1 
HETATM 5 C CB TRP . . . E 2 -152.265 23.018 -25.288 1 60.91 ? CB TRP 500 A 1 
HETATM 6 C CG TRP . . . E 2 -153.05 22.44 -24.146 1 58.07 ? CG TRP 500 A 1 
HETATM 7 C CD1 TRP . . . E 2 -152.856 21.228 -23.547 1 56.61 ? CD1 TRP 500 A 1 
HETATM 8 C CD2 TRP . . . E 2 -154.15 23.055 -23.459 1 56.46 ? CD2 TRP 500 A 1 
HETATM 9 N NE1 TRP . . . E 2 -153.764 21.048 -22.53 1 56.46 ? NE1 TRP 500 A 1 
HETATM 10 C CE2 TRP . . . E 2 -154.571 22.153 -22.455 1 56.64 ? CE2 TRP 500 A 1 
HETATM 11 C CE3 TRP . . . E 2 -154.819 24.279 -23.593 1 56.8 ? CE3 TRP 500 A 1 
HETATM 12 C CZ2 TRP . . . E 2 -155.632 22.438 -21.591 1 56.38 ? CZ2 TRP 500 A 1 
HETATM 13 C CZ3 TRP . . . E 2 -155.875 24.56 -22.732 1 56.29 ? CZ3 TRP 500 A 1 
HETATM 14 C CH2 TRP . . . E 2 -156.269 23.644 -21.745 1 56.22 ? CH2 TRP 500 A 1 
HETATM 15 O OXT TRP . . . E 2 -152.647 25.083 -27.56 1 62.24 ? OXT TRP 500 A 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           229 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           15 
#