data_3KUS # _model_server_result.job_id 5jl6LufAnaSvParPndX7eA _model_server_result.datetime_utc '2024-12-27 03:02:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kus # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1}' # _entry.id 3KUS # _exptl.entry_id 3KUS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 100.12 _cell.angle_beta 92.26 _cell.angle_gamma 98.9 _cell.entry_id 3KUS _cell.length_a 26.396 _cell.length_b 31.61 _cell.length_c 48.214 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KUS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I 1 1 B,D,F,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 149 n n C1 C2 GOL sing 150 n n C1 H11 GOL sing 151 n n C1 H12 GOL sing 152 n n O1 HO1 GOL sing 153 n n C2 O2 GOL sing 154 n n C2 C3 GOL sing 155 n n C2 H2 GOL sing 156 n n O2 HO2 GOL sing 157 n n C3 O3 GOL sing 158 n n C3 H31 GOL sing 159 n n C3 H32 GOL sing 160 n n O3 HO3 GOL sing 161 n n # _atom_sites.entry_id 3KUS _atom_sites.fract_transf_matrix[1][1] 0.037885 _atom_sites.fract_transf_matrix[1][2] 0.005935 _atom_sites.fract_transf_matrix[1][3] 0.002634 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.032021 _atom_sites.fract_transf_matrix[2][3] 0.005998 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021118 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 1 1 GOL GOL . F 4 EPE B 1 1 1 EPE EPE . G 5 HOH A 1 3 3 HOH HOH . G 5 HOH A 2 7 7 HOH HOH . G 5 HOH A 3 8 8 HOH HOH . G 5 HOH A 4 11 11 HOH HOH . G 5 HOH A 5 12 12 HOH HOH . G 5 HOH A 6 13 13 HOH HOH . G 5 HOH A 7 16 16 HOH HOH . G 5 HOH A 8 17 17 HOH HOH . G 5 HOH A 9 19 19 HOH HOH . G 5 HOH A 10 20 20 HOH HOH . G 5 HOH A 11 22 22 HOH HOH . G 5 HOH A 12 23 23 HOH HOH . G 5 HOH A 13 24 24 HOH HOH . G 5 HOH A 14 26 26 HOH HOH . G 5 HOH A 15 27 27 HOH HOH . G 5 HOH A 16 28 28 HOH HOH . G 5 HOH A 17 29 29 HOH HOH . G 5 HOH A 18 36 36 HOH HOH . G 5 HOH A 19 37 37 HOH HOH . G 5 HOH A 20 38 38 HOH HOH . G 5 HOH A 21 47 47 HOH HOH . G 5 HOH A 22 49 49 HOH HOH . G 5 HOH A 23 50 50 HOH HOH . G 5 HOH A 24 54 54 HOH HOH . G 5 HOH A 25 57 57 HOH HOH . G 5 HOH A 26 63 63 HOH HOH . G 5 HOH A 27 64 64 HOH HOH . G 5 HOH A 28 65 65 HOH HOH . G 5 HOH A 29 67 67 HOH HOH . G 5 HOH A 30 71 71 HOH HOH . G 5 HOH A 31 74 74 HOH HOH . G 5 HOH A 32 76 76 HOH HOH . G 5 HOH A 33 77 77 HOH HOH . G 5 HOH A 34 79 79 HOH HOH . G 5 HOH A 35 87 87 HOH HOH . G 5 HOH A 36 90 90 HOH HOH . G 5 HOH A 37 100 100 HOH HOH . G 5 HOH A 38 101 101 HOH HOH . G 5 HOH A 39 102 102 HOH HOH . G 5 HOH A 40 103 103 HOH HOH . G 5 HOH A 41 112 112 HOH HOH . G 5 HOH A 42 115 115 HOH HOH . G 5 HOH A 43 117 117 HOH HOH . G 5 HOH A 44 129 129 HOH HOH . G 5 HOH A 45 133 133 HOH HOH . G 5 HOH A 46 139 139 HOH HOH . G 5 HOH A 47 153 153 HOH HOH . G 5 HOH A 48 161 161 HOH HOH . G 5 HOH A 49 173 173 HOH HOH . G 5 HOH A 50 187 187 HOH HOH . G 5 HOH A 51 193 193 HOH HOH . G 5 HOH A 52 194 194 HOH HOH . G 5 HOH A 53 198 198 HOH HOH . G 5 HOH A 54 199 199 HOH HOH . G 5 HOH A 55 210 210 HOH HOH . G 5 HOH A 56 211 211 HOH HOH . G 5 HOH A 57 212 212 HOH HOH . G 5 HOH A 58 213 213 HOH HOH . G 5 HOH A 59 216 216 HOH HOH . G 5 HOH A 60 230 230 HOH HOH . G 5 HOH A 61 237 237 HOH HOH . G 5 HOH A 62 240 240 HOH HOH . G 5 HOH A 63 627 1 HOH HOH . H 5 HOH B 1 2 2 HOH HOH . H 5 HOH B 2 4 4 HOH HOH . H 5 HOH B 3 6 6 HOH HOH . H 5 HOH B 4 9 9 HOH HOH . H 5 HOH B 5 10 10 HOH HOH . H 5 HOH B 6 14 14 HOH HOH . H 5 HOH B 7 15 15 HOH HOH . H 5 HOH B 8 18 18 HOH HOH . H 5 HOH B 9 21 21 HOH HOH . H 5 HOH B 10 33 33 HOH HOH . H 5 HOH B 11 34 34 HOH HOH . H 5 HOH B 12 40 40 HOH HOH . H 5 HOH B 13 41 41 HOH HOH . H 5 HOH B 14 43 43 HOH HOH . H 5 HOH B 15 44 44 HOH HOH . H 5 HOH B 16 51 51 HOH HOH . H 5 HOH B 17 52 52 HOH HOH . H 5 HOH B 18 53 53 HOH HOH . H 5 HOH B 19 56 56 HOH HOH . H 5 HOH B 20 60 60 HOH HOH . H 5 HOH B 21 61 61 HOH HOH . H 5 HOH B 22 62 62 HOH HOH . H 5 HOH B 23 66 66 HOH HOH . H 5 HOH B 24 78 78 HOH HOH . H 5 HOH B 25 82 82 HOH HOH . H 5 HOH B 26 85 85 HOH HOH . H 5 HOH B 27 86 86 HOH HOH . H 5 HOH B 28 88 88 HOH HOH . H 5 HOH B 29 89 89 HOH HOH . H 5 HOH B 30 92 92 HOH HOH . H 5 HOH B 31 94 94 HOH HOH . H 5 HOH B 32 96 96 HOH HOH . H 5 HOH B 33 99 99 HOH HOH . H 5 HOH B 34 105 105 HOH HOH . H 5 HOH B 35 109 109 HOH HOH . H 5 HOH B 36 114 114 HOH HOH . H 5 HOH B 37 120 120 HOH HOH . H 5 HOH B 38 122 122 HOH HOH . H 5 HOH B 39 128 128 HOH HOH . H 5 HOH B 40 130 130 HOH HOH . H 5 HOH B 41 138 138 HOH HOH . H 5 HOH B 42 140 140 HOH HOH . H 5 HOH B 43 150 150 HOH HOH . H 5 HOH B 44 178 178 HOH HOH . H 5 HOH B 45 188 188 HOH HOH . H 5 HOH B 46 192 192 HOH HOH . H 5 HOH B 47 208 208 HOH HOH . H 5 HOH B 48 214 214 HOH HOH . H 5 HOH B 49 217 217 HOH HOH . H 5 HOH B 50 231 231 HOH HOH . I 5 HOH C 1 5 5 HOH HOH . I 5 HOH C 2 25 25 HOH HOH . I 5 HOH C 3 48 48 HOH HOH . I 5 HOH C 4 84 84 HOH HOH . I 5 HOH C 5 203 203 HOH HOH . I 5 HOH C 6 204 204 HOH HOH . I 5 HOH C 7 206 206 HOH HOH . J 5 HOH D 1 35 35 HOH HOH . J 5 HOH D 2 42 42 HOH HOH . J 5 HOH D 3 45 45 HOH HOH . J 5 HOH D 4 55 55 HOH HOH . J 5 HOH D 5 58 58 HOH HOH . J 5 HOH D 6 59 59 HOH HOH . J 5 HOH D 7 209 209 HOH HOH . J 5 HOH D 8 229 229 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 3 -3.358 15.422 -6.629 1 25.59 ? C1 GOL 1 A 1 HETATM 2 O O1 GOL . . . E 3 -3.056 15.829 -5.312 1 28.5 ? O1 GOL 1 A 1 HETATM 3 C C2 GOL . . . E 3 -3.165 13.917 -6.784 1 23.92 ? C2 GOL 1 A 1 HETATM 4 O O2 GOL . . . E 3 -3.114 13.64 -8.161 1 27.67 ? O2 GOL 1 A 1 HETATM 5 C C3 GOL . . . E 3 -4.348 13.176 -6.17 1 21.42 ? C3 GOL 1 A 1 HETATM 6 O O3 GOL . . . E 3 -4.497 11.883 -6.705 1 20.24 ? O3 GOL 1 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 229 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #