data_3KUS # _model_server_result.job_id bp43-wWyyqznpyiaFNiMJQ _model_server_result.datetime_utc '2024-12-27 03:11:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kus # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1}' # _entry.id 3KUS # _exptl.entry_id 3KUS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 100.12 _cell.angle_beta 92.26 _cell.angle_gamma 98.9 _cell.entry_id 3KUS _cell.length_a 26.396 _cell.length_b 31.61 _cell.length_c 48.214 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KUS _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,G,I 1 1 B,D,F,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 70 n n N1 C6 EPE sing 71 n n N1 C9 EPE sing 72 n n C2 C3 EPE sing 73 n n C2 H21 EPE sing 74 n n C2 H22 EPE sing 75 n n C3 N4 EPE sing 76 n n C3 H31 EPE sing 77 n n C3 H32 EPE sing 78 n n N4 C5 EPE sing 79 n n N4 C7 EPE sing 80 n n C5 C6 EPE sing 81 n n C5 H51 EPE sing 82 n n C5 H52 EPE sing 83 n n C6 H61 EPE sing 84 n n C6 H62 EPE sing 85 n n C7 C8 EPE sing 86 n n C7 H71 EPE sing 87 n n C7 H72 EPE sing 88 n n C8 O8 EPE sing 89 n n C8 H81 EPE sing 90 n n C8 H82 EPE sing 91 n n O8 HO8 EPE sing 92 n n C9 C10 EPE sing 93 n n C9 H91 EPE sing 94 n n C9 H92 EPE sing 95 n n C10 S EPE sing 96 n n C10 H101 EPE sing 97 n n C10 H102 EPE sing 98 n n S O1S EPE doub 99 n n S O2S EPE doub 100 n n S O3S EPE sing 101 n n O3S HOS3 EPE sing 102 n n # _atom_sites.entry_id 3KUS _atom_sites.fract_transf_matrix[1][1] 0.037885 _atom_sites.fract_transf_matrix[1][2] 0.005935 _atom_sites.fract_transf_matrix[1][3] 0.002634 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.032021 _atom_sites.fract_transf_matrix[2][3] 0.005998 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021118 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 1 1 GOL GOL . F 4 EPE B 1 1 1 EPE EPE . G 5 HOH A 1 3 3 HOH HOH . G 5 HOH A 2 7 7 HOH HOH . G 5 HOH A 3 8 8 HOH HOH . G 5 HOH A 4 11 11 HOH HOH . G 5 HOH A 5 12 12 HOH HOH . G 5 HOH A 6 13 13 HOH HOH . G 5 HOH A 7 16 16 HOH HOH . G 5 HOH A 8 17 17 HOH HOH . G 5 HOH A 9 19 19 HOH HOH . G 5 HOH A 10 20 20 HOH HOH . G 5 HOH A 11 22 22 HOH HOH . G 5 HOH A 12 23 23 HOH HOH . G 5 HOH A 13 24 24 HOH HOH . G 5 HOH A 14 26 26 HOH HOH . G 5 HOH A 15 27 27 HOH HOH . G 5 HOH A 16 28 28 HOH HOH . G 5 HOH A 17 29 29 HOH HOH . G 5 HOH A 18 36 36 HOH HOH . G 5 HOH A 19 37 37 HOH HOH . G 5 HOH A 20 38 38 HOH HOH . G 5 HOH A 21 47 47 HOH HOH . G 5 HOH A 22 49 49 HOH HOH . G 5 HOH A 23 50 50 HOH HOH . G 5 HOH A 24 54 54 HOH HOH . G 5 HOH A 25 57 57 HOH HOH . G 5 HOH A 26 63 63 HOH HOH . G 5 HOH A 27 64 64 HOH HOH . G 5 HOH A 28 65 65 HOH HOH . G 5 HOH A 29 67 67 HOH HOH . G 5 HOH A 30 71 71 HOH HOH . G 5 HOH A 31 74 74 HOH HOH . G 5 HOH A 32 76 76 HOH HOH . G 5 HOH A 33 77 77 HOH HOH . G 5 HOH A 34 79 79 HOH HOH . G 5 HOH A 35 87 87 HOH HOH . G 5 HOH A 36 90 90 HOH HOH . G 5 HOH A 37 100 100 HOH HOH . G 5 HOH A 38 101 101 HOH HOH . G 5 HOH A 39 102 102 HOH HOH . G 5 HOH A 40 103 103 HOH HOH . G 5 HOH A 41 112 112 HOH HOH . G 5 HOH A 42 115 115 HOH HOH . G 5 HOH A 43 117 117 HOH HOH . G 5 HOH A 44 129 129 HOH HOH . G 5 HOH A 45 133 133 HOH HOH . G 5 HOH A 46 139 139 HOH HOH . G 5 HOH A 47 153 153 HOH HOH . G 5 HOH A 48 161 161 HOH HOH . G 5 HOH A 49 173 173 HOH HOH . G 5 HOH A 50 187 187 HOH HOH . G 5 HOH A 51 193 193 HOH HOH . G 5 HOH A 52 194 194 HOH HOH . G 5 HOH A 53 198 198 HOH HOH . G 5 HOH A 54 199 199 HOH HOH . G 5 HOH A 55 210 210 HOH HOH . G 5 HOH A 56 211 211 HOH HOH . G 5 HOH A 57 212 212 HOH HOH . G 5 HOH A 58 213 213 HOH HOH . G 5 HOH A 59 216 216 HOH HOH . G 5 HOH A 60 230 230 HOH HOH . G 5 HOH A 61 237 237 HOH HOH . G 5 HOH A 62 240 240 HOH HOH . G 5 HOH A 63 627 1 HOH HOH . H 5 HOH B 1 2 2 HOH HOH . H 5 HOH B 2 4 4 HOH HOH . H 5 HOH B 3 6 6 HOH HOH . H 5 HOH B 4 9 9 HOH HOH . H 5 HOH B 5 10 10 HOH HOH . H 5 HOH B 6 14 14 HOH HOH . H 5 HOH B 7 15 15 HOH HOH . H 5 HOH B 8 18 18 HOH HOH . H 5 HOH B 9 21 21 HOH HOH . H 5 HOH B 10 33 33 HOH HOH . H 5 HOH B 11 34 34 HOH HOH . H 5 HOH B 12 40 40 HOH HOH . H 5 HOH B 13 41 41 HOH HOH . H 5 HOH B 14 43 43 HOH HOH . H 5 HOH B 15 44 44 HOH HOH . H 5 HOH B 16 51 51 HOH HOH . H 5 HOH B 17 52 52 HOH HOH . H 5 HOH B 18 53 53 HOH HOH . H 5 HOH B 19 56 56 HOH HOH . H 5 HOH B 20 60 60 HOH HOH . H 5 HOH B 21 61 61 HOH HOH . H 5 HOH B 22 62 62 HOH HOH . H 5 HOH B 23 66 66 HOH HOH . H 5 HOH B 24 78 78 HOH HOH . H 5 HOH B 25 82 82 HOH HOH . H 5 HOH B 26 85 85 HOH HOH . H 5 HOH B 27 86 86 HOH HOH . H 5 HOH B 28 88 88 HOH HOH . H 5 HOH B 29 89 89 HOH HOH . H 5 HOH B 30 92 92 HOH HOH . H 5 HOH B 31 94 94 HOH HOH . H 5 HOH B 32 96 96 HOH HOH . H 5 HOH B 33 99 99 HOH HOH . H 5 HOH B 34 105 105 HOH HOH . H 5 HOH B 35 109 109 HOH HOH . H 5 HOH B 36 114 114 HOH HOH . H 5 HOH B 37 120 120 HOH HOH . H 5 HOH B 38 122 122 HOH HOH . H 5 HOH B 39 128 128 HOH HOH . H 5 HOH B 40 130 130 HOH HOH . H 5 HOH B 41 138 138 HOH HOH . H 5 HOH B 42 140 140 HOH HOH . H 5 HOH B 43 150 150 HOH HOH . H 5 HOH B 44 178 178 HOH HOH . H 5 HOH B 45 188 188 HOH HOH . H 5 HOH B 46 192 192 HOH HOH . H 5 HOH B 47 208 208 HOH HOH . H 5 HOH B 48 214 214 HOH HOH . H 5 HOH B 49 217 217 HOH HOH . H 5 HOH B 50 231 231 HOH HOH . I 5 HOH C 1 5 5 HOH HOH . I 5 HOH C 2 25 25 HOH HOH . I 5 HOH C 3 48 48 HOH HOH . I 5 HOH C 4 84 84 HOH HOH . I 5 HOH C 5 203 203 HOH HOH . I 5 HOH C 6 204 204 HOH HOH . I 5 HOH C 7 206 206 HOH HOH . J 5 HOH D 1 35 35 HOH HOH . J 5 HOH D 2 42 42 HOH HOH . J 5 HOH D 3 45 45 HOH HOH . J 5 HOH D 4 55 55 HOH HOH . J 5 HOH D 5 58 58 HOH HOH . J 5 HOH D 6 59 59 HOH HOH . J 5 HOH D 7 209 209 HOH HOH . J 5 HOH D 8 229 229 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EPE . . . F 4 12.379 17.969 -0.121 0.5 36.13 ? N1 EPE 1 B 1 HETATM 2 C C2 EPE . . . F 4 13.252 17.51 -1.217 0.5 36.24 ? C2 EPE 1 B 1 HETATM 3 C C3 EPE . . . F 4 14.614 18.195 -1.109 0.5 36.2 ? C3 EPE 1 B 1 HETATM 4 N N4 EPE . . . F 4 14.512 19.632 -0.882 0.5 36.3 ? N4 EPE 1 B 1 HETATM 5 C C5 EPE . . . F 4 13.426 20.19 -0.089 0.5 36.32 ? C5 EPE 1 B 1 HETATM 6 C C6 EPE . . . F 4 12.118 19.416 -0.239 0.5 36.3 ? C6 EPE 1 B 1 HETATM 7 C C7 EPE . . . F 4 15.492 20.525 -1.476 0.5 36.44 ? C7 EPE 1 B 1 HETATM 8 C C8 EPE . . . F 4 16.714 20.746 -0.588 0.5 36.38 ? C8 EPE 1 B 1 HETATM 9 O O8 EPE . . . F 4 16.634 22.02 0.013 0.5 36.48 ? O8 EPE 1 B 1 HETATM 10 C C9 EPE . . . F 4 11.102 17.239 -0.16 0.5 35.89 ? C9 EPE 1 B 1 HETATM 11 C C10 EPE . . . F 4 10.974 16.351 1.073 1 35.4 ? C10 EPE 1 B 1 HETATM 12 S S EPE . . . F 4 10.364 14.699 0.65 1 34.94 ? S EPE 1 B 1 HETATM 13 O O1S EPE . . . F 4 10.372 13.807 1.805 1 34.46 ? O1S EPE 1 B 1 HETATM 14 O O2S EPE . . . F 4 11.223 14.113 -0.376 1 34.86 ? O2S EPE 1 B 1 HETATM 15 O O3S EPE . . . F 4 9.009 14.871 0.138 1 34.31 ? O3S EPE 1 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 15 #