data_3KVL # _model_server_result.job_id x8RhjziY62DKvU6P7qwTHA _model_server_result.datetime_utc '2024-11-08 16:12:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kvl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":401}' # _entry.id 3KVL # _exptl.entry_id 3KVL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3KVL _cell.length_a 90.695 _cell.length_b 90.695 _cell.length_c 123.218 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KVL _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 44 n n C OXT ACT sing 45 n n C CH3 ACT sing 46 n n CH3 H1 ACT sing 47 n n CH3 H2 ACT sing 48 n n CH3 H3 ACT sing 49 n n # _atom_sites.entry_id 3KVL _atom_sites.fract_transf_matrix[1][1] 0.011026 _atom_sites.fract_transf_matrix[1][2] 0.006366 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012732 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008116 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 397 397 SO4 SO4 . C 3 FMN A 1 398 398 FMN FMN . D 4 DOR A 1 399 399 DOR DOR . E 5 DET A 1 400 400 DET DET . F 6 ACT A 1 401 401 ACT ACT . G 7 7Z5 A 1 402 402 7Z5 7Z5 . H 8 HOH A 1 403 403 HOH HOH . H 8 HOH A 2 404 404 HOH HOH . H 8 HOH A 3 405 405 HOH HOH . H 8 HOH A 4 406 406 HOH HOH . H 8 HOH A 5 407 407 HOH HOH . H 8 HOH A 6 408 408 HOH HOH . H 8 HOH A 7 409 409 HOH HOH . H 8 HOH A 8 410 410 HOH HOH . H 8 HOH A 9 411 411 HOH HOH . H 8 HOH A 10 412 412 HOH HOH . H 8 HOH A 11 413 413 HOH HOH . H 8 HOH A 12 414 414 HOH HOH . H 8 HOH A 13 415 415 HOH HOH . H 8 HOH A 14 416 416 HOH HOH . H 8 HOH A 15 417 417 HOH HOH . H 8 HOH A 16 418 418 HOH HOH . H 8 HOH A 17 419 419 HOH HOH . H 8 HOH A 18 420 420 HOH HOH . H 8 HOH A 19 421 421 HOH HOH . H 8 HOH A 20 422 422 HOH HOH . H 8 HOH A 21 423 423 HOH HOH . H 8 HOH A 22 424 424 HOH HOH . H 8 HOH A 23 425 425 HOH HOH . H 8 HOH A 24 426 426 HOH HOH . H 8 HOH A 25 427 427 HOH HOH . H 8 HOH A 26 428 428 HOH HOH . H 8 HOH A 27 429 429 HOH HOH . H 8 HOH A 28 430 430 HOH HOH . H 8 HOH A 29 431 431 HOH HOH . H 8 HOH A 30 432 432 HOH HOH . H 8 HOH A 31 433 433 HOH HOH . H 8 HOH A 32 434 434 HOH HOH . H 8 HOH A 33 435 435 HOH HOH . H 8 HOH A 34 436 436 HOH HOH . H 8 HOH A 35 437 437 HOH HOH . H 8 HOH A 36 438 438 HOH HOH . H 8 HOH A 37 439 439 HOH HOH . H 8 HOH A 38 440 440 HOH HOH . H 8 HOH A 39 441 441 HOH HOH . H 8 HOH A 40 442 442 HOH HOH . H 8 HOH A 41 443 443 HOH HOH . H 8 HOH A 42 444 444 HOH HOH . H 8 HOH A 43 445 445 HOH HOH . H 8 HOH A 44 446 446 HOH HOH . H 8 HOH A 45 447 447 HOH HOH . H 8 HOH A 46 448 448 HOH HOH . H 8 HOH A 47 449 449 HOH HOH . H 8 HOH A 48 450 450 HOH HOH . H 8 HOH A 49 451 451 HOH HOH . H 8 HOH A 50 452 452 HOH HOH . H 8 HOH A 51 453 453 HOH HOH . H 8 HOH A 52 454 454 HOH HOH . H 8 HOH A 53 455 455 HOH HOH . H 8 HOH A 54 456 456 HOH HOH . H 8 HOH A 55 457 457 HOH HOH . H 8 HOH A 56 458 458 HOH HOH . H 8 HOH A 57 459 459 HOH HOH . H 8 HOH A 58 460 460 HOH HOH . H 8 HOH A 59 461 461 HOH HOH . H 8 HOH A 60 462 462 HOH HOH . H 8 HOH A 61 463 463 HOH HOH . H 8 HOH A 62 464 464 HOH HOH . H 8 HOH A 63 465 465 HOH HOH . H 8 HOH A 64 466 466 HOH HOH . H 8 HOH A 65 467 467 HOH HOH . H 8 HOH A 66 468 468 HOH HOH . H 8 HOH A 67 469 469 HOH HOH . H 8 HOH A 68 470 470 HOH HOH . H 8 HOH A 69 471 471 HOH HOH . H 8 HOH A 70 472 472 HOH HOH . H 8 HOH A 71 473 473 HOH HOH . H 8 HOH A 72 474 474 HOH HOH . H 8 HOH A 73 475 475 HOH HOH . H 8 HOH A 74 476 476 HOH HOH . H 8 HOH A 75 477 477 HOH HOH . H 8 HOH A 76 478 478 HOH HOH . H 8 HOH A 77 479 479 HOH HOH . H 8 HOH A 78 480 480 HOH HOH . H 8 HOH A 79 481 481 HOH HOH . H 8 HOH A 80 482 482 HOH HOH . H 8 HOH A 81 483 483 HOH HOH . H 8 HOH A 82 484 484 HOH HOH . H 8 HOH A 83 485 485 HOH HOH . H 8 HOH A 84 486 486 HOH HOH . H 8 HOH A 85 487 487 HOH HOH . H 8 HOH A 86 488 488 HOH HOH . H 8 HOH A 87 489 489 HOH HOH . H 8 HOH A 88 490 490 HOH HOH . H 8 HOH A 89 491 491 HOH HOH . H 8 HOH A 90 492 492 HOH HOH . H 8 HOH A 91 493 493 HOH HOH . H 8 HOH A 92 494 494 HOH HOH . H 8 HOH A 93 495 495 HOH HOH . H 8 HOH A 94 496 496 HOH HOH . H 8 HOH A 95 497 497 HOH HOH . H 8 HOH A 96 498 498 HOH HOH . H 8 HOH A 97 499 499 HOH HOH . H 8 HOH A 98 500 500 HOH HOH . H 8 HOH A 99 501 501 HOH HOH . H 8 HOH A 100 502 502 HOH HOH . H 8 HOH A 101 503 503 HOH HOH . H 8 HOH A 102 504 504 HOH HOH . H 8 HOH A 103 505 505 HOH HOH . H 8 HOH A 104 506 506 HOH HOH . H 8 HOH A 105 507 507 HOH HOH . H 8 HOH A 106 508 508 HOH HOH . H 8 HOH A 107 509 509 HOH HOH . H 8 HOH A 108 510 510 HOH HOH . H 8 HOH A 109 511 511 HOH HOH . H 8 HOH A 110 512 512 HOH HOH . H 8 HOH A 111 513 513 HOH HOH . H 8 HOH A 112 514 514 HOH HOH . H 8 HOH A 113 515 515 HOH HOH . H 8 HOH A 114 516 516 HOH HOH . H 8 HOH A 115 517 517 HOH HOH . H 8 HOH A 116 518 518 HOH HOH . H 8 HOH A 117 519 519 HOH HOH . H 8 HOH A 118 520 520 HOH HOH . H 8 HOH A 119 521 521 HOH HOH . H 8 HOH A 120 522 522 HOH HOH . H 8 HOH A 121 523 523 HOH HOH . H 8 HOH A 122 524 524 HOH HOH . H 8 HOH A 123 525 525 HOH HOH . H 8 HOH A 124 526 526 HOH HOH . H 8 HOH A 125 527 527 HOH HOH . H 8 HOH A 126 528 528 HOH HOH . H 8 HOH A 127 529 529 HOH HOH . H 8 HOH A 128 530 530 HOH HOH . H 8 HOH A 129 531 531 HOH HOH . H 8 HOH A 130 532 532 HOH HOH . H 8 HOH A 131 533 533 HOH HOH . H 8 HOH A 132 534 534 HOH HOH . H 8 HOH A 133 535 535 HOH HOH . H 8 HOH A 134 536 536 HOH HOH . H 8 HOH A 135 537 537 HOH HOH . H 8 HOH A 136 538 538 HOH HOH . H 8 HOH A 137 539 539 HOH HOH . H 8 HOH A 138 540 540 HOH HOH . H 8 HOH A 139 541 541 HOH HOH . H 8 HOH A 140 542 542 HOH HOH . H 8 HOH A 141 543 543 HOH HOH . H 8 HOH A 142 544 544 HOH HOH . H 8 HOH A 143 545 545 HOH HOH . H 8 HOH A 144 546 546 HOH HOH . H 8 HOH A 145 547 547 HOH HOH . H 8 HOH A 146 548 548 HOH HOH . H 8 HOH A 147 549 549 HOH HOH . H 8 HOH A 148 550 550 HOH HOH . H 8 HOH A 149 551 551 HOH HOH . H 8 HOH A 150 552 552 HOH HOH . H 8 HOH A 151 553 553 HOH HOH . H 8 HOH A 152 554 554 HOH HOH . H 8 HOH A 153 555 555 HOH HOH . H 8 HOH A 154 556 556 HOH HOH . H 8 HOH A 155 557 557 HOH HOH . H 8 HOH A 156 558 558 HOH HOH . H 8 HOH A 157 559 559 HOH HOH . H 8 HOH A 158 560 560 HOH HOH . H 8 HOH A 159 561 561 HOH HOH . H 8 HOH A 160 562 562 HOH HOH . H 8 HOH A 161 563 563 HOH HOH . H 8 HOH A 162 564 564 HOH HOH . H 8 HOH A 163 565 565 HOH HOH . H 8 HOH A 164 566 566 HOH HOH . H 8 HOH A 165 567 567 HOH HOH . H 8 HOH A 166 568 568 HOH HOH . H 8 HOH A 167 569 569 HOH HOH . H 8 HOH A 168 570 570 HOH HOH . H 8 HOH A 169 571 571 HOH HOH . H 8 HOH A 170 572 572 HOH HOH . H 8 HOH A 171 573 573 HOH HOH . H 8 HOH A 172 574 574 HOH HOH . H 8 HOH A 173 575 575 HOH HOH . H 8 HOH A 174 576 576 HOH HOH . H 8 HOH A 175 577 577 HOH HOH . H 8 HOH A 176 578 578 HOH HOH . H 8 HOH A 177 579 579 HOH HOH . H 8 HOH A 178 580 580 HOH HOH . H 8 HOH A 179 581 581 HOH HOH . H 8 HOH A 180 582 582 HOH HOH . H 8 HOH A 181 583 583 HOH HOH . H 8 HOH A 182 584 584 HOH HOH . H 8 HOH A 183 585 585 HOH HOH . H 8 HOH A 184 586 586 HOH HOH . H 8 HOH A 185 587 587 HOH HOH . H 8 HOH A 186 588 588 HOH HOH . H 8 HOH A 187 589 589 HOH HOH . H 8 HOH A 188 590 590 HOH HOH . H 8 HOH A 189 591 591 HOH HOH . H 8 HOH A 190 592 592 HOH HOH . H 8 HOH A 191 593 593 HOH HOH . H 8 HOH A 192 594 594 HOH HOH . H 8 HOH A 193 595 595 HOH HOH . H 8 HOH A 194 596 596 HOH HOH . H 8 HOH A 195 597 597 HOH HOH . H 8 HOH A 196 598 598 HOH HOH . H 8 HOH A 197 599 599 HOH HOH . H 8 HOH A 198 600 600 HOH HOH . H 8 HOH A 199 601 601 HOH HOH . H 8 HOH A 200 602 602 HOH HOH . H 8 HOH A 201 603 603 HOH HOH . H 8 HOH A 202 604 604 HOH HOH . H 8 HOH A 203 605 605 HOH HOH . H 8 HOH A 204 606 606 HOH HOH . H 8 HOH A 205 607 607 HOH HOH . H 8 HOH A 206 608 608 HOH HOH . H 8 HOH A 207 609 609 HOH HOH . H 8 HOH A 208 610 610 HOH HOH . H 8 HOH A 209 611 611 HOH HOH . H 8 HOH A 210 612 612 HOH HOH . H 8 HOH A 211 613 613 HOH HOH . H 8 HOH A 212 614 614 HOH HOH . H 8 HOH A 213 615 615 HOH HOH . H 8 HOH A 214 616 616 HOH HOH . H 8 HOH A 215 617 617 HOH HOH . H 8 HOH A 216 618 618 HOH HOH . H 8 HOH A 217 619 619 HOH HOH . H 8 HOH A 218 620 620 HOH HOH . H 8 HOH A 219 621 621 HOH HOH . H 8 HOH A 220 622 622 HOH HOH . H 8 HOH A 221 623 623 HOH HOH . H 8 HOH A 222 624 624 HOH HOH . H 8 HOH A 223 625 625 HOH HOH . H 8 HOH A 224 626 626 HOH HOH . H 8 HOH A 225 627 627 HOH HOH . H 8 HOH A 226 628 628 HOH HOH . H 8 HOH A 227 629 629 HOH HOH . H 8 HOH A 228 630 630 HOH HOH . H 8 HOH A 229 631 631 HOH HOH . H 8 HOH A 230 632 632 HOH HOH . H 8 HOH A 231 633 633 HOH HOH . H 8 HOH A 232 634 634 HOH HOH . H 8 HOH A 233 635 635 HOH HOH . H 8 HOH A 234 636 636 HOH HOH . H 8 HOH A 235 637 637 HOH HOH . H 8 HOH A 236 638 638 HOH HOH . H 8 HOH A 237 639 639 HOH HOH . H 8 HOH A 238 640 640 HOH HOH . H 8 HOH A 239 641 641 HOH HOH . H 8 HOH A 240 642 642 HOH HOH . H 8 HOH A 241 643 643 HOH HOH . H 8 HOH A 242 644 644 HOH HOH . H 8 HOH A 243 645 645 HOH HOH . H 8 HOH A 244 646 646 HOH HOH . H 8 HOH A 245 647 647 HOH HOH . H 8 HOH A 246 648 648 HOH HOH . H 8 HOH A 247 649 649 HOH HOH . H 8 HOH A 248 650 650 HOH HOH . H 8 HOH A 249 651 651 HOH HOH . H 8 HOH A 250 652 652 HOH HOH . H 8 HOH A 251 653 653 HOH HOH . H 8 HOH A 252 654 654 HOH HOH . H 8 HOH A 253 655 655 HOH HOH . H 8 HOH A 254 656 656 HOH HOH . H 8 HOH A 255 657 657 HOH HOH . H 8 HOH A 256 658 658 HOH HOH . H 8 HOH A 257 659 659 HOH HOH . H 8 HOH A 258 660 660 HOH HOH . H 8 HOH A 259 661 661 HOH HOH . H 8 HOH A 260 662 662 HOH HOH . H 8 HOH A 261 663 663 HOH HOH . H 8 HOH A 262 664 664 HOH HOH . H 8 HOH A 263 665 665 HOH HOH . H 8 HOH A 264 666 666 HOH HOH . H 8 HOH A 265 667 667 HOH HOH . H 8 HOH A 266 668 668 HOH HOH . H 8 HOH A 267 669 669 HOH HOH . H 8 HOH A 268 670 670 HOH HOH . H 8 HOH A 269 671 671 HOH HOH . H 8 HOH A 270 672 672 HOH HOH . H 8 HOH A 271 673 673 HOH HOH . H 8 HOH A 272 674 674 HOH HOH . H 8 HOH A 273 675 675 HOH HOH . H 8 HOH A 274 676 676 HOH HOH . H 8 HOH A 275 677 677 HOH HOH . H 8 HOH A 276 678 678 HOH HOH . H 8 HOH A 277 679 679 HOH HOH . H 8 HOH A 278 680 680 HOH HOH . H 8 HOH A 279 681 681 HOH HOH . H 8 HOH A 280 682 682 HOH HOH . H 8 HOH A 281 683 683 HOH HOH . H 8 HOH A 282 684 684 HOH HOH . H 8 HOH A 283 685 685 HOH HOH . H 8 HOH A 284 686 686 HOH HOH . H 8 HOH A 285 687 687 HOH HOH . H 8 HOH A 286 688 688 HOH HOH . H 8 HOH A 287 689 689 HOH HOH . H 8 HOH A 288 690 690 HOH HOH . H 8 HOH A 289 691 691 HOH HOH . H 8 HOH A 290 692 692 HOH HOH . H 8 HOH A 291 693 693 HOH HOH . H 8 HOH A 292 694 694 HOH HOH . H 8 HOH A 293 695 695 HOH HOH . H 8 HOH A 294 696 696 HOH HOH . H 8 HOH A 295 697 697 HOH HOH . H 8 HOH A 296 698 698 HOH HOH . H 8 HOH A 297 699 699 HOH HOH . H 8 HOH A 298 700 700 HOH HOH . H 8 HOH A 299 701 701 HOH HOH . H 8 HOH A 300 702 702 HOH HOH . H 8 HOH A 301 703 703 HOH HOH . H 8 HOH A 302 704 704 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . F 6 20.894 29.512 5.02 1 30.39 ? C ACT 401 A 1 HETATM 2 O O ACT . . . F 6 20.233 29.381 6.073 1 29.01 ? O ACT 401 A 1 HETATM 3 O OXT ACT . . . F 6 22 28.969 4.811 1 29.85 ? OXT ACT 401 A 1 HETATM 4 C CH3 ACT . . . F 6 20.315 30.398 3.915 1 26.96 ? CH3 ACT 401 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #