data_3KWP # _model_server_result.job_id Bxto1bOIGHQlSdIwkA6WIA _model_server_result.datetime_utc '2024-12-26 20:20:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kwp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 3KWP # _exptl.entry_id 3KWP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KWP _cell.length_a 64.275 _cell.length_b 79.206 _cell.length_c 54.132 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KWP _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 79.206 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 31 A MSE 28 1_555 A N THR 32 A THR 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C MSE 89 A MSE 86 1_555 A N GLN 90 A GLN 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 A C MSE 99 A MSE 96 1_555 A N PRO 100 A PRO 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.359 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 334 n n C C2 TRS sing 335 n n C C3 TRS sing 336 n n C N TRS sing 337 n n C1 O1 TRS sing 338 n n C1 H11 TRS sing 339 n n C1 H12 TRS sing 340 n n C2 O2 TRS sing 341 n n C2 H21 TRS sing 342 n n C2 H22 TRS sing 343 n n C3 O3 TRS sing 344 n n C3 H31 TRS sing 345 n n C3 H32 TRS sing 346 n n N HN1 TRS sing 347 n n N HN2 TRS sing 348 n n N HN3 TRS sing 349 n n O1 HO1 TRS sing 350 n n O2 HO2 TRS sing 351 n n O3 HO3 TRS sing 352 n n # _atom_sites.entry_id 3KWP _atom_sites.fract_transf_matrix[1][1] 0.015558 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012625 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018473 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 301 301 TRS TRS . C 3 HOH A 1 294 1 HOH HOH . C 3 HOH A 2 295 2 HOH HOH . C 3 HOH A 3 296 3 HOH HOH . C 3 HOH A 4 297 4 HOH HOH . C 3 HOH A 5 298 5 HOH HOH . C 3 HOH A 6 299 6 HOH HOH . C 3 HOH A 7 300 7 HOH HOH . C 3 HOH A 8 302 8 HOH HOH . C 3 HOH A 9 303 9 HOH HOH . C 3 HOH A 10 304 10 HOH HOH . C 3 HOH A 11 305 11 HOH HOH . C 3 HOH A 12 306 12 HOH HOH . C 3 HOH A 13 307 13 HOH HOH . C 3 HOH A 14 308 14 HOH HOH . C 3 HOH A 15 309 15 HOH HOH . C 3 HOH A 16 310 16 HOH HOH . C 3 HOH A 17 311 17 HOH HOH . C 3 HOH A 18 312 18 HOH HOH . C 3 HOH A 19 313 19 HOH HOH . C 3 HOH A 20 314 20 HOH HOH . C 3 HOH A 21 315 21 HOH HOH . C 3 HOH A 22 316 22 HOH HOH . C 3 HOH A 23 317 23 HOH HOH . C 3 HOH A 24 318 24 HOH HOH . C 3 HOH A 25 319 25 HOH HOH . C 3 HOH A 26 320 26 HOH HOH . C 3 HOH A 27 321 27 HOH HOH . C 3 HOH A 28 322 28 HOH HOH . C 3 HOH A 29 323 29 HOH HOH . C 3 HOH A 30 324 30 HOH HOH . C 3 HOH A 31 325 31 HOH HOH . C 3 HOH A 32 326 32 HOH HOH . C 3 HOH A 33 327 33 HOH HOH . C 3 HOH A 34 328 34 HOH HOH . C 3 HOH A 35 329 35 HOH HOH . C 3 HOH A 36 330 36 HOH HOH . C 3 HOH A 37 331 37 HOH HOH . C 3 HOH A 38 332 38 HOH HOH . C 3 HOH A 39 333 39 HOH HOH . C 3 HOH A 40 334 40 HOH HOH . C 3 HOH A 41 335 41 HOH HOH . C 3 HOH A 42 336 42 HOH HOH . C 3 HOH A 43 337 43 HOH HOH . C 3 HOH A 44 338 44 HOH HOH . C 3 HOH A 45 339 45 HOH HOH . C 3 HOH A 46 340 46 HOH HOH . C 3 HOH A 47 341 47 HOH HOH . C 3 HOH A 48 342 48 HOH HOH . C 3 HOH A 49 343 49 HOH HOH . C 3 HOH A 50 344 50 HOH HOH . C 3 HOH A 51 345 51 HOH HOH . C 3 HOH A 52 346 52 HOH HOH . C 3 HOH A 53 347 53 HOH HOH . C 3 HOH A 54 348 54 HOH HOH . C 3 HOH A 55 349 55 HOH HOH . C 3 HOH A 56 350 56 HOH HOH . C 3 HOH A 57 351 57 HOH HOH . C 3 HOH A 58 352 58 HOH HOH . C 3 HOH A 59 353 59 HOH HOH . C 3 HOH A 60 354 60 HOH HOH . C 3 HOH A 61 355 61 HOH HOH . C 3 HOH A 62 356 62 HOH HOH . C 3 HOH A 63 357 63 HOH HOH . C 3 HOH A 64 358 64 HOH HOH . C 3 HOH A 65 359 65 HOH HOH . C 3 HOH A 66 360 66 HOH HOH . C 3 HOH A 67 361 67 HOH HOH . C 3 HOH A 68 362 68 HOH HOH . C 3 HOH A 69 363 69 HOH HOH . C 3 HOH A 70 364 70 HOH HOH . C 3 HOH A 71 365 72 HOH HOH . C 3 HOH A 72 366 73 HOH HOH . C 3 HOH A 73 367 74 HOH HOH . C 3 HOH A 74 368 75 HOH HOH . C 3 HOH A 75 369 76 HOH HOH . C 3 HOH A 76 370 77 HOH HOH . C 3 HOH A 77 371 78 HOH HOH . C 3 HOH A 78 372 79 HOH HOH . C 3 HOH A 79 373 80 HOH HOH . C 3 HOH A 80 374 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . B 2 5.711 17.072 1.892 1 64.41 ? C TRS 301 A 1 HETATM 2 C C1 TRS . . . B 2 7.168 16.626 2.058 1 64.66 ? C1 TRS 301 A 1 HETATM 3 C C2 TRS . . . B 2 5.519 17.977 0.655 1 64.7 ? C2 TRS 301 A 1 HETATM 4 C C3 TRS . . . B 2 5.243 17.761 3.197 1 64.99 ? C3 TRS 301 A 1 HETATM 5 N N TRS . . . B 2 4.865 15.887 1.668 1 64.74 ? N TRS 301 A 1 HETATM 6 O O1 TRS . . . B 2 7.488 15.54 1.207 1 64.02 ? O1 TRS 301 A 1 HETATM 7 O O2 TRS . . . B 2 6.696 18.391 -0.02 1 63.54 ? O2 TRS 301 A 1 HETATM 8 O O3 TRS . . . B 2 4.774 16.907 4.242 1 62.29 ? O3 TRS 301 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #