data_3KWX # _model_server_result.job_id qDUjfpYm0sF3VREKidhO4w _model_server_result.datetime_utc '2024-10-20 00:36:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kwx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":480}' # _entry.id 3KWX # _exptl.entry_id 3KWX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3KWX _cell.length_a 120.727 _cell.length_b 120.727 _cell.length_c 115.676 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KWX _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 30 1_555 A SG CYS 38 A CYS 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? disulf ? disulf2 A SG CYS 150 A CYS 150 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? disulf ? disulf3 A SG CYS 240 A CYS 240 1_555 A SG CYS 283 A CYS 283 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf4 A SG CYS 440 A CYS 440 1_555 A SG CYS 475 A CYS 475 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? covale ? covale1 A ND2 ASN 197 A ASN 197 1_555 C C1 NAG . A NAG 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? metalc ? metalc1 A OD1 ASN 121 A ASN 121 1_555 B CA CA . A CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc2 A O GLU 162 A GLU 162 1_555 B CA CA . A CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc3 A OD2 ASP 175 A ASP 175 1_555 B CA CA . A CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc4 A OD1 ASP 175 A ASP 175 1_555 B CA CA . A CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc5 A O HIS 210 A HIS 210 1_555 B CA CA . A CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc6 B CA CA . A CA 480 1_555 D O HOH . A HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc7 B CA CA . A CA 480 1_555 D O HOH . A HOH 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc8 B CA CA . A CA 480 1_555 D O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3KWX _atom_sites.fract_transf_matrix[1][1] 0.008283 _atom_sites.fract_transf_matrix[1][2] 0.004782 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009565 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008645 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 480 480 CA CA . C 3 NAG A 1 500 500 NAG NAG . D 4 HOH A 1 501 501 HOH HOH . D 4 HOH A 2 502 502 HOH HOH . D 4 HOH A 3 503 503 HOH HOH . D 4 HOH A 4 504 504 HOH HOH . D 4 HOH A 5 505 505 HOH HOH . D 4 HOH A 6 506 506 HOH HOH . D 4 HOH A 7 507 507 HOH HOH . D 4 HOH A 8 508 508 HOH HOH . D 4 HOH A 9 509 509 HOH HOH . D 4 HOH A 10 510 510 HOH HOH . D 4 HOH A 11 511 511 HOH HOH . D 4 HOH A 12 512 512 HOH HOH . D 4 HOH A 13 513 513 HOH HOH . D 4 HOH A 14 514 514 HOH HOH . D 4 HOH A 15 515 515 HOH HOH . D 4 HOH A 16 516 516 HOH HOH . D 4 HOH A 17 517 517 HOH HOH . D 4 HOH A 18 518 518 HOH HOH . D 4 HOH A 19 519 519 HOH HOH . D 4 HOH A 20 520 520 HOH HOH . D 4 HOH A 21 521 521 HOH HOH . D 4 HOH A 22 522 522 HOH HOH . D 4 HOH A 23 523 523 HOH HOH . D 4 HOH A 24 524 524 HOH HOH . D 4 HOH A 25 525 525 HOH HOH . D 4 HOH A 26 526 526 HOH HOH . D 4 HOH A 27 527 527 HOH HOH . D 4 HOH A 28 528 528 HOH HOH . D 4 HOH A 29 529 529 HOH HOH . D 4 HOH A 30 530 530 HOH HOH . D 4 HOH A 31 531 531 HOH HOH . D 4 HOH A 32 532 532 HOH HOH . D 4 HOH A 33 533 533 HOH HOH . D 4 HOH A 34 534 534 HOH HOH . D 4 HOH A 35 535 535 HOH HOH . D 4 HOH A 36 536 536 HOH HOH . D 4 HOH A 37 537 537 HOH HOH . D 4 HOH A 38 538 538 HOH HOH . D 4 HOH A 39 539 539 HOH HOH . D 4 HOH A 40 540 540 HOH HOH . D 4 HOH A 41 541 541 HOH HOH . D 4 HOH A 42 542 542 HOH HOH . D 4 HOH A 43 543 543 HOH HOH . D 4 HOH A 44 544 544 HOH HOH . D 4 HOH A 45 545 545 HOH HOH . D 4 HOH A 46 546 546 HOH HOH . D 4 HOH A 47 547 547 HOH HOH . D 4 HOH A 48 548 548 HOH HOH . D 4 HOH A 49 549 549 HOH HOH . D 4 HOH A 50 550 550 HOH HOH . D 4 HOH A 51 551 551 HOH HOH . D 4 HOH A 52 552 552 HOH HOH . D 4 HOH A 53 553 553 HOH HOH . D 4 HOH A 54 554 554 HOH HOH . D 4 HOH A 55 555 555 HOH HOH . D 4 HOH A 56 556 556 HOH HOH . D 4 HOH A 57 557 557 HOH HOH . D 4 HOH A 58 558 558 HOH HOH . D 4 HOH A 59 559 559 HOH HOH . D 4 HOH A 60 560 560 HOH HOH . D 4 HOH A 61 561 561 HOH HOH . D 4 HOH A 62 562 562 HOH HOH . D 4 HOH A 63 563 563 HOH HOH . D 4 HOH A 64 564 564 HOH HOH . D 4 HOH A 65 565 565 HOH HOH . D 4 HOH A 66 566 566 HOH HOH . D 4 HOH A 67 567 567 HOH HOH . D 4 HOH A 68 568 568 HOH HOH . D 4 HOH A 69 569 569 HOH HOH . D 4 HOH A 70 570 570 HOH HOH . D 4 HOH A 71 571 571 HOH HOH . D 4 HOH A 72 572 572 HOH HOH . D 4 HOH A 73 573 573 HOH HOH . D 4 HOH A 74 574 574 HOH HOH . D 4 HOH A 75 575 575 HOH HOH . D 4 HOH A 76 576 576 HOH HOH . D 4 HOH A 77 577 577 HOH HOH . D 4 HOH A 78 578 578 HOH HOH . D 4 HOH A 79 579 579 HOH HOH . D 4 HOH A 80 580 580 HOH HOH . D 4 HOH A 81 581 581 HOH HOH . D 4 HOH A 82 582 582 HOH HOH . D 4 HOH A 83 583 583 HOH HOH . D 4 HOH A 84 584 584 HOH HOH . D 4 HOH A 85 585 585 HOH HOH . D 4 HOH A 86 586 586 HOH HOH . D 4 HOH A 87 587 587 HOH HOH . D 4 HOH A 88 588 588 HOH HOH . D 4 HOH A 89 589 589 HOH HOH . D 4 HOH A 90 590 590 HOH HOH . D 4 HOH A 91 591 591 HOH HOH . D 4 HOH A 92 592 592 HOH HOH . D 4 HOH A 93 593 593 HOH HOH . D 4 HOH A 94 594 594 HOH HOH . D 4 HOH A 95 596 596 HOH HOH . D 4 HOH A 96 597 597 HOH HOH . D 4 HOH A 97 599 599 HOH HOH . D 4 HOH A 98 600 600 HOH HOH . D 4 HOH A 99 601 601 HOH HOH . D 4 HOH A 100 602 602 HOH HOH . D 4 HOH A 101 603 603 HOH HOH . D 4 HOH A 102 604 604 HOH HOH . D 4 HOH A 103 605 605 HOH HOH . D 4 HOH A 104 606 606 HOH HOH . D 4 HOH A 105 607 607 HOH HOH . D 4 HOH A 106 609 609 HOH HOH . D 4 HOH A 107 610 610 HOH HOH . D 4 HOH A 108 611 611 HOH HOH . D 4 HOH A 109 613 613 HOH HOH . D 4 HOH A 110 614 614 HOH HOH . D 4 HOH A 111 615 615 HOH HOH . D 4 HOH A 112 616 616 HOH HOH . D 4 HOH A 113 617 617 HOH HOH . D 4 HOH A 114 618 618 HOH HOH . D 4 HOH A 115 621 621 HOH HOH . D 4 HOH A 116 622 622 HOH HOH . D 4 HOH A 117 624 624 HOH HOH . D 4 HOH A 118 625 625 HOH HOH . D 4 HOH A 119 626 626 HOH HOH . D 4 HOH A 120 627 627 HOH HOH . D 4 HOH A 121 628 628 HOH HOH . D 4 HOH A 122 629 629 HOH HOH . D 4 HOH A 123 631 631 HOH HOH . D 4 HOH A 124 632 632 HOH HOH . D 4 HOH A 125 635 635 HOH HOH . D 4 HOH A 126 636 636 HOH HOH . D 4 HOH A 127 638 638 HOH HOH . D 4 HOH A 128 639 639 HOH HOH . D 4 HOH A 129 641 641 HOH HOH . D 4 HOH A 130 642 642 HOH HOH . D 4 HOH A 131 644 644 HOH HOH . D 4 HOH A 132 645 645 HOH HOH . D 4 HOH A 133 646 646 HOH HOH . D 4 HOH A 134 647 647 HOH HOH . D 4 HOH A 135 648 648 HOH HOH . D 4 HOH A 136 649 649 HOH HOH . D 4 HOH A 137 650 650 HOH HOH . D 4 HOH A 138 651 651 HOH HOH . D 4 HOH A 139 652 652 HOH HOH . D 4 HOH A 140 653 653 HOH HOH . D 4 HOH A 141 655 655 HOH HOH . D 4 HOH A 142 657 657 HOH HOH . D 4 HOH A 143 659 659 HOH HOH . D 4 HOH A 144 660 660 HOH HOH . D 4 HOH A 145 661 661 HOH HOH . D 4 HOH A 146 663 663 HOH HOH . D 4 HOH A 147 664 664 HOH HOH . D 4 HOH A 148 667 667 HOH HOH . D 4 HOH A 149 668 668 HOH HOH . D 4 HOH A 150 669 669 HOH HOH . D 4 HOH A 151 670 670 HOH HOH . D 4 HOH A 152 672 672 HOH HOH . D 4 HOH A 153 673 673 HOH HOH . D 4 HOH A 154 674 674 HOH HOH . D 4 HOH A 155 675 675 HOH HOH . D 4 HOH A 156 677 677 HOH HOH . D 4 HOH A 157 678 678 HOH HOH . D 4 HOH A 158 680 680 HOH HOH . D 4 HOH A 159 682 682 HOH HOH . D 4 HOH A 160 683 683 HOH HOH . D 4 HOH A 161 684 684 HOH HOH . D 4 HOH A 162 685 685 HOH HOH . D 4 HOH A 163 686 686 HOH HOH . D 4 HOH A 164 687 687 HOH HOH . D 4 HOH A 165 688 688 HOH HOH . D 4 HOH A 166 690 690 HOH HOH . D 4 HOH A 167 691 691 HOH HOH . D 4 HOH A 168 693 693 HOH HOH . D 4 HOH A 169 694 694 HOH HOH . D 4 HOH A 170 695 695 HOH HOH . D 4 HOH A 171 699 699 HOH HOH . D 4 HOH A 172 700 700 HOH HOH . D 4 HOH A 173 701 701 HOH HOH . D 4 HOH A 174 703 703 HOH HOH . D 4 HOH A 175 704 704 HOH HOH . D 4 HOH A 176 705 705 HOH HOH . D 4 HOH A 177 706 706 HOH HOH . D 4 HOH A 178 707 707 HOH HOH . D 4 HOH A 179 710 710 HOH HOH . D 4 HOH A 180 711 711 HOH HOH . D 4 HOH A 181 713 713 HOH HOH . D 4 HOH A 182 716 716 HOH HOH . D 4 HOH A 183 718 718 HOH HOH . D 4 HOH A 184 719 719 HOH HOH . D 4 HOH A 185 720 720 HOH HOH . D 4 HOH A 186 721 721 HOH HOH . D 4 HOH A 187 722 722 HOH HOH . D 4 HOH A 188 723 723 HOH HOH . D 4 HOH A 189 724 724 HOH HOH . D 4 HOH A 190 726 726 HOH HOH . D 4 HOH A 191 727 727 HOH HOH . D 4 HOH A 192 730 730 HOH HOH . D 4 HOH A 193 731 731 HOH HOH . D 4 HOH A 194 733 733 HOH HOH . D 4 HOH A 195 734 734 HOH HOH . D 4 HOH A 196 735 735 HOH HOH . D 4 HOH A 197 736 736 HOH HOH . D 4 HOH A 198 739 739 HOH HOH . D 4 HOH A 199 740 740 HOH HOH . D 4 HOH A 200 742 742 HOH HOH . D 4 HOH A 201 744 744 HOH HOH . D 4 HOH A 202 748 748 HOH HOH . D 4 HOH A 203 749 749 HOH HOH . D 4 HOH A 204 750 750 HOH HOH . D 4 HOH A 205 751 751 HOH HOH . D 4 HOH A 206 752 752 HOH HOH . D 4 HOH A 207 753 753 HOH HOH . D 4 HOH A 208 754 754 HOH HOH . D 4 HOH A 209 755 755 HOH HOH . D 4 HOH A 210 756 756 HOH HOH . D 4 HOH A 211 757 757 HOH HOH . D 4 HOH A 212 758 758 HOH HOH . D 4 HOH A 213 762 762 HOH HOH . D 4 HOH A 214 763 763 HOH HOH . D 4 HOH A 215 764 764 HOH HOH . D 4 HOH A 216 765 765 HOH HOH . D 4 HOH A 217 766 766 HOH HOH . D 4 HOH A 218 767 767 HOH HOH . D 4 HOH A 219 768 768 HOH HOH . D 4 HOH A 220 769 769 HOH HOH . D 4 HOH A 221 770 770 HOH HOH . D 4 HOH A 222 771 771 HOH HOH . D 4 HOH A 223 772 772 HOH HOH . D 4 HOH A 224 775 775 HOH HOH . D 4 HOH A 225 777 777 HOH HOH . D 4 HOH A 226 778 778 HOH HOH . D 4 HOH A 227 779 779 HOH HOH . D 4 HOH A 228 780 780 HOH HOH . D 4 HOH A 229 781 781 HOH HOH . D 4 HOH A 230 782 782 HOH HOH . D 4 HOH A 231 783 783 HOH HOH . D 4 HOH A 232 786 786 HOH HOH . D 4 HOH A 233 789 789 HOH HOH . D 4 HOH A 234 791 791 HOH HOH . D 4 HOH A 235 793 793 HOH HOH . D 4 HOH A 236 794 794 HOH HOH . D 4 HOH A 237 795 795 HOH HOH . D 4 HOH A 238 796 796 HOH HOH . D 4 HOH A 239 797 797 HOH HOH . D 4 HOH A 240 798 798 HOH HOH . D 4 HOH A 241 799 799 HOH HOH . D 4 HOH A 242 800 800 HOH HOH . D 4 HOH A 243 802 802 HOH HOH . D 4 HOH A 244 803 803 HOH HOH . D 4 HOH A 245 804 804 HOH HOH . D 4 HOH A 246 805 805 HOH HOH . D 4 HOH A 247 806 806 HOH HOH . D 4 HOH A 248 807 807 HOH HOH . D 4 HOH A 249 810 810 HOH HOH . D 4 HOH A 250 811 811 HOH HOH . D 4 HOH A 251 813 813 HOH HOH . D 4 HOH A 252 814 814 HOH HOH . D 4 HOH A 253 817 817 HOH HOH . D 4 HOH A 254 818 818 HOH HOH . D 4 HOH A 255 819 819 HOH HOH . D 4 HOH A 256 820 820 HOH HOH . D 4 HOH A 257 821 821 HOH HOH . D 4 HOH A 258 823 823 HOH HOH . D 4 HOH A 259 824 824 HOH HOH . D 4 HOH A 260 825 825 HOH HOH . D 4 HOH A 261 826 826 HOH HOH . D 4 HOH A 262 827 827 HOH HOH . D 4 HOH A 263 828 828 HOH HOH . D 4 HOH A 264 829 829 HOH HOH . D 4 HOH A 265 830 830 HOH HOH . D 4 HOH A 266 831 831 HOH HOH . D 4 HOH A 267 832 832 HOH HOH . D 4 HOH A 268 833 833 HOH HOH . D 4 HOH A 269 834 834 HOH HOH . D 4 HOH A 270 835 835 HOH HOH . D 4 HOH A 271 836 836 HOH HOH . D 4 HOH A 272 837 837 HOH HOH . D 4 HOH A 273 838 838 HOH HOH . D 4 HOH A 274 839 839 HOH HOH . D 4 HOH A 275 840 840 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -37.194 _atom_site.Cartn_y 34.07 _atom_site.Cartn_z 35.108 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.3 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 480 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 486 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #