data_3KXA
#
_model_server_result.job_id            iLqR7B2ABbtIR5tYW9KhRA 
_model_server_result.datetime_utc      '2025-09-03 22:12:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3kxa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":205}' 
#
_entry.id    3KXA 
#
_exptl.entry_id    3KXA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              ? 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'UNKNOWN ATOM OR ION' 
_entity.pdbx_number_of_molecules    22 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3KXA 
_cell.length_a            124.823 
_cell.length_b            124.823 
_cell.length_c            137.577 
_cell.Z_PDB               36 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3KXA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,RA,SA 1 1 
C,D,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,TA,UA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 P N N 
? 4 Q N N 
? 4 R N N 
? 4 S N N 
? 4 T N N 
? 4 U N N 
? 4 Z N N 
? 4 AA N N 
? 4 BA N N 
? 4 CA N N 
? 4 DA N N 
? 4 EA N N 
? 4 FA N N 
? 4 GA N N 
? 4 HA N N 
? 4 IA N N 
? 4 JA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 16 A CYS 8 1_555 A SG CYS 25 A CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf2 B SG CYS 16 B CYS 8 1_555 B SG CYS 25 B CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf3 C SG CYS 16 C CYS 8 1_555 C SG CYS 25 C CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf4 D SG CYS 16 D CYS 8 1_555 D SG CYS 25 D CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
covale ? covale1 A C ALA 52 A ALA 44 1_555 A N MSE 53 A MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale2 A C MSE 53 A MSE 45 1_555 A N ASP 54 A ASP 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale3 A C ARG 77 A ARG 69 1_555 A N MSE 78 A MSE 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale4 A C MSE 78 A MSE 70 1_555 A N LYS 79 A LYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale5 A C TYR 137 A TYR 129 1_555 A N MSE 138 A MSE 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale6 A C MSE 138 A MSE 130 1_555 A N GLU 139 A GLU 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale7 K UNK UNX . A UNX 201 1_555 M UNK UNX . A UNX 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.259 ? 
covale ? covale8 M UNK UNX . A UNX 202 1_555 L UNK UNX . A UNX 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.249 ? 
covale ? covale9 M UNK UNX . A UNX 202 1_555 N UNK UNX . A UNX 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.519 ? 
covale ? covale10 N UNK UNX . A UNX 204 1_555 O UNK UNX . A UNX 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.522 ? 
covale ? covale11 O UNK UNX . A UNX 205 1_555 P UNK UNX . A UNX 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.527 ? 
covale ? covale12 P UNK UNX . A UNX 206 1_555 Q UNK UNX . A UNX 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.528 ? 
covale ? covale13 Q UNK UNX . A UNX 207 1_555 R UNK UNX . A UNX 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.529 ? 
covale ? covale14 R UNK UNX . A UNX 208 1_555 S UNK UNX . A UNX 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.536 ? 
covale ? covale15 S UNK UNX . A UNX 209 1_555 T UNK UNX . A UNX 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.533 ? 
covale ? covale16 T UNK UNX . A UNX 210 1_555 U UNK UNX . A UNX 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.534 ? 
covale ? covale17 B C ALA 52 B ALA 44 1_555 B N MSE 53 B MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale18 B C MSE 53 B MSE 45 1_555 B N ASP 54 B ASP 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale19 B C ARG 77 B ARG 69 1_555 B N MSE 78 B MSE 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale20 B C MSE 78 B MSE 70 1_555 B N LYS 79 B LYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale21 B C TYR 137 B TYR 129 1_555 B N MSE 138 B MSE 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale22 C C ALA 52 C ALA 44 1_555 C N MSE 53 C MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale23 C C MSE 53 C MSE 45 1_555 C N ASP 54 C ASP 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale24 C C ARG 77 C ARG 69 1_555 C N MSE 78 C MSE 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale25 C C MSE 78 C MSE 70 1_555 C N LYS 79 C LYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale26 C C TYR 137 C TYR 129 1_555 C N MSE 138 C MSE 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale27 C C MSE 138 C MSE 130 1_555 C N GLU 139 C GLU 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale28 Z UNK UNX . C UNX 212 1_555 BA UNK UNX . C UNX 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.261 ? 
covale ? covale29 BA UNK UNX . C UNX 213 1_555 AA UNK UNX . C UNX 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.258 ? 
covale ? covale30 BA UNK UNX . C UNX 213 1_555 CA UNK UNX . C UNX 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.514 ? 
covale ? covale31 CA UNK UNX . C UNX 215 1_555 DA UNK UNX . C UNX 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.526 ? 
covale ? covale32 DA UNK UNX . C UNX 216 1_555 EA UNK UNX . C UNX 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.526 ? 
covale ? covale33 EA UNK UNX . C UNX 217 1_555 FA UNK UNX . C UNX 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.529 ? 
covale ? covale34 FA UNK UNX . C UNX 218 1_555 GA UNK UNX . C UNX 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.528 ? 
covale ? covale35 GA UNK UNX . C UNX 219 1_555 HA UNK UNX . C UNX 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.533 ? 
covale ? covale36 HA UNK UNX . C UNX 220 1_555 IA UNK UNX . C UNX 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.528 ? 
covale ? covale37 IA UNK UNX . C UNX 221 1_555 JA UNK UNX . C UNX 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.523 ? 
covale ? covale38 D C ALA 52 D ALA 44 1_555 D N MSE 53 D MSE 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale39 D C MSE 53 D MSE 45 1_555 D N ASP 54 D ASP 46 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale40 D C ARG 77 D ARG 69 1_555 D N MSE 78 D MSE 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale41 D C MSE 78 D MSE 70 1_555 D N LYS 79 D LYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale42 D C TYR 137 D TYR 129 1_555 D N MSE 138 D MSE 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
#
_chem_comp.formula           ? 
_chem_comp.formula_weight    ? 
_chem_comp.id                UNX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'UNKNOWN ATOM OR ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3KXA 
_atom_sites.fract_transf_matrix[1][1]    0.008011 
_atom_sites.fract_transf_matrix[1][2]    0.004625 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009251 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007269 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 ASN A 1 140 140 ASN ASN . 
F 3 CL A 1 134 134 CL CL . 
G 3 CL A 1 135 135 CL CL . 
H 3 CL A 1 136 136 CL CL . 
I 3 CL A 1 137 137 CL CL . 
J 3 CL A 1 138 138 CL CL . 
K 4 UNX A 1 201 201 UNX UNX . 
L 4 UNX A 1 203 203 UNX UNX . 
M 4 UNX A 1 202 202 UNX UNX . 
N 4 UNX A 1 204 204 UNX UNX . 
O 4 UNX A 1 205 205 UNX UNX . 
P 4 UNX A 1 206 206 UNX UNX . 
Q 4 UNX A 1 207 207 UNX UNX . 
R 4 UNX A 1 208 208 UNX UNX . 
S 4 UNX A 1 209 209 UNX UNX . 
T 4 UNX A 1 210 210 UNX UNX . 
U 4 UNX A 1 211 211 UNX UNX . 
V 2 ASN B 1 140 140 ASN ASN . 
W 3 CL B 1 134 134 CL CL . 
X 3 CL B 1 135 135 CL CL . 
Y 2 ASN C 1 140 140 ASN ASN . 
Z 4 UNX C 1 212 212 UNX UNX . 
AA 4 UNX C 1 214 214 UNX UNX . 
BA 4 UNX C 1 213 213 UNX UNX . 
CA 4 UNX C 1 215 215 UNX UNX . 
DA 4 UNX C 1 216 216 UNX UNX . 
EA 4 UNX C 1 217 217 UNX UNX . 
FA 4 UNX C 1 218 218 UNX UNX . 
GA 4 UNX C 1 219 219 UNX UNX . 
HA 4 UNX C 1 220 220 UNX UNX . 
IA 4 UNX C 1 221 221 UNX UNX . 
JA 4 UNX C 1 222 222 UNX UNX . 
KA 3 CL C 1 134 134 CL CL . 
LA 3 CL C 1 135 135 CL CL . 
MA 3 CL C 1 136 136 CL CL . 
NA 3 CL C 1 137 137 CL CL . 
OA 3 CL C 1 138 138 CL CL . 
PA 3 CL C 1 139 139 CL CL . 
QA 2 ASN D 1 140 140 ASN ASN . 
RA 5 HOH A 1 139 139 HOH HOH . 
RA 5 HOH A 2 141 141 HOH HOH . 
RA 5 HOH A 3 142 142 HOH HOH . 
RA 5 HOH A 4 143 143 HOH HOH . 
RA 5 HOH A 5 144 144 HOH HOH . 
RA 5 HOH A 6 145 145 HOH HOH . 
RA 5 HOH A 7 146 146 HOH HOH . 
RA 5 HOH A 8 147 147 HOH HOH . 
SA 5 HOH B 1 136 136 HOH HOH . 
SA 5 HOH B 2 137 137 HOH HOH . 
SA 5 HOH B 3 138 138 HOH HOH . 
SA 5 HOH B 4 139 139 HOH HOH . 
SA 5 HOH B 5 141 141 HOH HOH . 
SA 5 HOH B 6 142 142 HOH HOH . 
SA 5 HOH B 7 143 143 HOH HOH . 
SA 5 HOH B 8 144 144 HOH HOH . 
SA 5 HOH B 9 145 145 HOH HOH . 
TA 5 HOH C 1 141 141 HOH HOH . 
TA 5 HOH C 2 142 142 HOH HOH . 
TA 5 HOH C 3 143 143 HOH HOH . 
TA 5 HOH C 4 144 144 HOH HOH . 
TA 5 HOH C 5 145 145 HOH HOH . 
UA 5 HOH D 1 134 134 HOH HOH . 
UA 5 HOH D 2 135 135 HOH HOH . 
UA 5 HOH D 3 136 136 HOH HOH . 
UA 5 HOH D 4 137 137 HOH HOH . 
UA 5 HOH D 5 138 138 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           X 
_atom_site.label_atom_id         UNK 
_atom_site.label_comp_id         UNX 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         O 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               37.836 
_atom_site.Cartn_y               64.264 
_atom_site.Cartn_z               70.023 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        32.52 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          UNK 
_atom_site.auth_comp_id          UNX 
_atom_site.auth_seq_id           205 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#