data_3KXV # _model_server_result.job_id C3RVh5FI79uV1zQUomfgUA _model_server_result.datetime_utc '2024-12-04 03:12:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3kxv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":3}' # _entry.id 3KXV # _exptl.entry_id 3KXV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3KXV _cell.length_a 91.46 _cell.length_b 91.46 _cell.length_c 110.52 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3KXV _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_545 y+1/2,x-1/2,-z+1/2 0 1 0 1 0 0 0 0 -1 45.73 -45.73 55.26 3 'crystal symmetry operation' 10_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 91.46 0 0 4 'crystal symmetry operation' 16_555 -y+1/2,-x+1/2,-z+1/2 0 -1 0 -1 0 0 0 0 -1 45.73 45.73 55.26 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 11 A CYS 1109 1_555 A SG CYS 54 A CYS 1152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 A SG CYS 40 A CYS 1138 1_555 A SG CYS 65 A CYS 1163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 69 A CYS 1167 1_555 A SG CYS 120 A CYS 1218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf4 A SG CYS 103 A CYS 1201 1_555 A SG CYS 130 A CYS 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 3KXV _atom_sites.fract_transf_matrix[1][1] 0.010934 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010934 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009048 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 1 1 SO4 SO4 . C 2 SO4 A 1 2 2 SO4 SO4 . D 2 SO4 A 1 3 3 SO4 SO4 . E 2 SO4 A 1 4 4 SO4 SO4 . F 2 SO4 A 1 5 5 SO4 SO4 . G 2 SO4 A 1 6 6 SO4 SO4 . H 3 HOH A 1 7 7 HOH HOH . H 3 HOH A 2 8 8 HOH HOH . H 3 HOH A 3 9 9 HOH HOH . H 3 HOH A 4 10 10 HOH HOH . H 3 HOH A 5 11 11 HOH HOH . H 3 HOH A 6 12 12 HOH HOH . H 3 HOH A 7 13 13 HOH HOH . H 3 HOH A 8 14 14 HOH HOH . H 3 HOH A 9 15 15 HOH HOH . H 3 HOH A 10 16 16 HOH HOH . H 3 HOH A 11 17 17 HOH HOH . H 3 HOH A 12 18 18 HOH HOH . H 3 HOH A 13 19 19 HOH HOH . H 3 HOH A 14 20 20 HOH HOH . H 3 HOH A 15 21 21 HOH HOH . H 3 HOH A 16 22 22 HOH HOH . H 3 HOH A 17 23 23 HOH HOH . H 3 HOH A 18 24 24 HOH HOH . H 3 HOH A 19 25 25 HOH HOH . H 3 HOH A 20 26 26 HOH HOH . H 3 HOH A 21 27 27 HOH HOH . H 3 HOH A 22 28 28 HOH HOH . H 3 HOH A 23 29 29 HOH HOH . H 3 HOH A 24 30 30 HOH HOH . H 3 HOH A 25 31 31 HOH HOH . H 3 HOH A 26 32 32 HOH HOH . H 3 HOH A 27 33 33 HOH HOH . H 3 HOH A 28 34 34 HOH HOH . H 3 HOH A 29 35 35 HOH HOH . H 3 HOH A 30 36 36 HOH HOH . H 3 HOH A 31 37 37 HOH HOH . H 3 HOH A 32 38 38 HOH HOH . H 3 HOH A 33 39 39 HOH HOH . H 3 HOH A 34 40 40 HOH HOH . H 3 HOH A 35 41 41 HOH HOH . H 3 HOH A 36 42 42 HOH HOH . H 3 HOH A 37 43 43 HOH HOH . H 3 HOH A 38 44 44 HOH HOH . H 3 HOH A 39 45 45 HOH HOH . H 3 HOH A 40 46 46 HOH HOH . H 3 HOH A 41 47 47 HOH HOH . H 3 HOH A 42 48 48 HOH HOH . H 3 HOH A 43 49 49 HOH HOH . H 3 HOH A 44 50 50 HOH HOH . H 3 HOH A 45 51 51 HOH HOH . H 3 HOH A 46 52 52 HOH HOH . H 3 HOH A 47 53 53 HOH HOH . H 3 HOH A 48 54 54 HOH HOH . H 3 HOH A 49 55 55 HOH HOH . H 3 HOH A 50 56 56 HOH HOH . H 3 HOH A 51 57 57 HOH HOH . H 3 HOH A 52 58 58 HOH HOH . H 3 HOH A 53 59 59 HOH HOH . H 3 HOH A 54 60 60 HOH HOH . H 3 HOH A 55 61 61 HOH HOH . H 3 HOH A 56 62 62 HOH HOH . H 3 HOH A 57 63 63 HOH HOH . H 3 HOH A 58 64 64 HOH HOH . H 3 HOH A 59 65 65 HOH HOH . H 3 HOH A 60 66 66 HOH HOH . H 3 HOH A 61 67 67 HOH HOH . H 3 HOH A 62 68 68 HOH HOH . H 3 HOH A 63 69 69 HOH HOH . H 3 HOH A 64 70 70 HOH HOH . H 3 HOH A 65 71 71 HOH HOH . H 3 HOH A 66 72 72 HOH HOH . H 3 HOH A 67 73 73 HOH HOH . H 3 HOH A 68 74 74 HOH HOH . H 3 HOH A 69 75 75 HOH HOH . H 3 HOH A 70 76 76 HOH HOH . H 3 HOH A 71 77 77 HOH HOH . H 3 HOH A 72 78 78 HOH HOH . H 3 HOH A 73 79 79 HOH HOH . H 3 HOH A 74 80 80 HOH HOH . H 3 HOH A 75 81 81 HOH HOH . H 3 HOH A 76 82 82 HOH HOH . H 3 HOH A 77 83 83 HOH HOH . H 3 HOH A 78 84 84 HOH HOH . H 3 HOH A 79 85 85 HOH HOH . H 3 HOH A 80 86 86 HOH HOH . H 3 HOH A 81 87 87 HOH HOH . H 3 HOH A 82 88 88 HOH HOH . H 3 HOH A 83 89 89 HOH HOH . H 3 HOH A 84 90 90 HOH HOH . H 3 HOH A 85 91 91 HOH HOH . H 3 HOH A 86 92 92 HOH HOH . H 3 HOH A 87 93 93 HOH HOH . H 3 HOH A 88 94 94 HOH HOH . H 3 HOH A 89 95 95 HOH HOH . H 3 HOH A 90 96 96 HOH HOH . H 3 HOH A 91 97 97 HOH HOH . H 3 HOH A 92 98 98 HOH HOH . H 3 HOH A 93 99 99 HOH HOH . H 3 HOH A 94 100 100 HOH HOH . H 3 HOH A 95 101 101 HOH HOH . H 3 HOH A 96 102 102 HOH HOH . H 3 HOH A 97 103 103 HOH HOH . H 3 HOH A 98 104 104 HOH HOH . H 3 HOH A 99 105 105 HOH HOH . H 3 HOH A 100 106 106 HOH HOH . H 3 HOH A 101 107 107 HOH HOH . H 3 HOH A 102 108 108 HOH HOH . H 3 HOH A 103 109 109 HOH HOH . H 3 HOH A 104 110 110 HOH HOH . H 3 HOH A 105 111 111 HOH HOH . H 3 HOH A 106 112 112 HOH HOH . H 3 HOH A 107 113 113 HOH HOH . H 3 HOH A 108 1232 2 HOH HOH . H 3 HOH A 109 1233 3 HOH HOH . H 3 HOH A 110 1234 4 HOH HOH . H 3 HOH A 111 1235 5 HOH HOH . H 3 HOH A 112 1236 6 HOH HOH . H 3 HOH A 113 1237 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 68.234 1.466 8.812 1 52.29 ? S SO4 3 A 1 HETATM 2 O O1 SO4 . . . D 2 69.444 1.965 8.162 1 57.68 ? O1 SO4 3 A 1 HETATM 3 O O2 SO4 . . . D 2 67.609 0.426 7.992 1 46.47 ? O2 SO4 3 A 1 HETATM 4 O O3 SO4 . . . D 2 68.598 0.92 10.118 1 50.78 ? O3 SO4 3 A 1 HETATM 5 O O4 SO4 . . . D 2 67.29 2.57 8.969 1 44.72 ? O4 SO4 3 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #